RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 IMUPQ9GZP8 106 aa7.7□□□□□ -1.18
UBE3D-208ENST00000626828 A8MUN3 132 aa7.69□□□□□ -1.18
UBE3D-208ENST00000626828 KLKP1Q107X0 134 aa7.69□□□□□ -1.18
UBE3D-208ENST00000626828 NDUFC1O43677 76 aa7.65□□□□□ -1.18
UBE3D-208ENST00000626828 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
UBE3D-208ENST00000626828 FCGBPQ9Y6R7 5405 aaPredicted RBP7.62□□□□□ -1.19
UBE3D-208ENST00000626828 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
UBE3D-208ENST00000626828 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
UBE3D-208ENST00000626828 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
UBE3D-208ENST00000626828 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
UBE3D-208ENST00000626828 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
UBE3D-208ENST00000626828 H0YAA0 97 aa7.53□□□□□ -1.2
UBE3D-208ENST00000626828 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
UBE3D-208ENST00000626828 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
UBE3D-208ENST00000626828 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
UBE3D-208ENST00000626828 Q5VV11 94 aa7.48□□□□□ -1.21
UBE3D-208ENST00000626828 MT1BP07438 61 aa7.44□□□□□ -1.22
UBE3D-208ENST00000626828 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
UBE3D-208ENST00000626828 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
UBE3D-208ENST00000626828 ACYP2P14621 99 aa7.4□□□□□ -1.22
UBE3D-208ENST00000626828 A6NN06 94 aa7.34□□□□□ -1.23
UBE3D-208ENST00000626828 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
UBE3D-208ENST00000626828 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
UBE3D-208ENST00000626828 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
UBE3D-208ENST00000626828 MACF1Q9UPN3 7388 aaKnown RBP7.31□□□□□ -1.24
UBE3D-208ENST00000626828 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
UBE3D-208ENST00000626828 P0C880 135 aa7.27□□□□□ -1.25
UBE3D-208ENST00000626828 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
UBE3D-208ENST00000626828 SPANXA2-OT1Q8N9U9 137 aa7.25□□□□□ -1.25
UBE3D-208ENST00000626828 R4GN34 69 aa7.25□□□□□ -1.25
UBE3D-208ENST00000626828 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
UBE3D-208ENST00000626828 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
UBE3D-208ENST00000626828 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
UBE3D-208ENST00000626828 M0QZ58 72 aa7.18□□□□□ -1.26
UBE3D-208ENST00000626828 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
UBE3D-208ENST00000626828 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
UBE3D-208ENST00000626828 COX7CP15954 63 aa7.13□□□□□ -1.27
UBE3D-208ENST00000626828 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
UBE3D-208ENST00000626828 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
UBE3D-208ENST00000626828 MT1XP80297 61 aa7.01□□□□□ -1.29
UBE3D-208ENST00000626828 COA5Q86WW8 74 aa7□□□□□ -1.29
UBE3D-208ENST00000626828 H7BZZ5 65 aa6.97□□□□□ -1.29
UBE3D-208ENST00000626828 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
UBE3D-208ENST00000626828 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
UBE3D-208ENST00000626828 SEC61GP60059 68 aa6.9□□□□□ -1.3
UBE3D-208ENST00000626828 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
UBE3D-208ENST00000626828 KRTAP5-9P26371 169 aa6.86□□□□□ -1.31
UBE3D-208ENST00000626828 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
UBE3D-208ENST00000626828 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
UBE3D-208ENST00000626828 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
UBE3D-208ENST00000626828 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
UBE3D-208ENST00000626828 NEBP20929 6669 aa6.76□□□□□ -1.33
UBE3D-208ENST00000626828 KMT2DO14686 5537 aa6.75□□□□□ -1.33
UBE3D-208ENST00000626828 A0A1B0GU33 70 aa6.75□□□□□ -1.33
UBE3D-208ENST00000626828 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
UBE3D-208ENST00000626828 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
UBE3D-208ENST00000626828 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
UBE3D-208ENST00000626828 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
UBE3D-208ENST00000626828 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
UBE3D-208ENST00000626828 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
UBE3D-208ENST00000626828 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
UBE3D-208ENST00000626828 A0A1B0GU69 56 aa6.67□□□□□ -1.34
UBE3D-208ENST00000626828 A0A0D9SG42 100 aa6.66□□□□□ -1.34
UBE3D-208ENST00000626828 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
UBE3D-208ENST00000626828 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
UBE3D-208ENST00000626828 MDN1Q9NU22 5596 aa6.63□□□□□ -1.35
UBE3D-208ENST00000626828 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
UBE3D-208ENST00000626828 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
UBE3D-208ENST00000626828 SPRR2EP22531 72 aa6.56□□□□□ -1.36
UBE3D-208ENST00000626828 SPRR2BP35325 72 aa6.56□□□□□ -1.36
UBE3D-208ENST00000626828 SPRR2AP35326 72 aa6.56□□□□□ -1.36
UBE3D-208ENST00000626828 TMEM258P61165 79 aa6.55□□□□□ -1.36
UBE3D-208ENST00000626828 KRTAP20-1Q3LI63 56 aa6.54□□□□□ -1.36
UBE3D-208ENST00000626828 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
UBE3D-208ENST00000626828 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
UBE3D-208ENST00000626828 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
UBE3D-208ENST00000626828 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
UBE3D-208ENST00000626828 KRTAP2-3P0C7H8 128 aa6.45□□□□□ -1.38
UBE3D-208ENST00000626828 KRTAP2-4Q9BYR9 128 aa6.45□□□□□ -1.38
UBE3D-208ENST00000626828 A8MU10 97 aa6.44□□□□□ -1.38
UBE3D-208ENST00000626828 SPRR2DP22532 72 aa6.34□□□□□ -1.39
UBE3D-208ENST00000626828 UQCR11O14957 56 aa6.32□□□□□ -1.4
UBE3D-208ENST00000626828 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
UBE3D-208ENST00000626828 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
UBE3D-208ENST00000626828 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
UBE3D-208ENST00000626828 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
UBE3D-208ENST00000626828 TNP1P09430 55 aa6.23□□□□□ -1.41
UBE3D-208ENST00000626828 V9GYY9 64 aa6.22□□□□□ -1.41
UBE3D-208ENST00000626828 MT1EP04732 61 aa6.2□□□□□ -1.42
UBE3D-208ENST00000626828 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
UBE3D-208ENST00000626828 Q1T7F1 81 aa6.16□□□□□ -1.42
UBE3D-208ENST00000626828 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
UBE3D-208ENST00000626828 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
UBE3D-208ENST00000626828 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
UBE3D-208ENST00000626828 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
UBE3D-208ENST00000626828 PSPHP1O15172 72 aa6.12□□□□□ -1.43
UBE3D-208ENST00000626828 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
UBE3D-208ENST00000626828 K7ERS5 55 aa6.07□□□□□ -1.44
UBE3D-208ENST00000626828 MT1GP13640 62 aa6.05□□□□□ -1.44
UBE3D-208ENST00000626828 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms