RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
SNRPA1-216ENST00000626000 S4R3F8 94 aa6.7□□□□□ -1.34
SNRPA1-216ENST00000626000 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
SNRPA1-216ENST00000626000 H3BPC8 53 aa6.68□□□□□ -1.34
SNRPA1-216ENST00000626000 MT1FP04733 61 aa6.68□□□□□ -1.34
SNRPA1-216ENST00000626000 H3BS24 57 aa6.66□□□□□ -1.34
SNRPA1-216ENST00000626000 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
SNRPA1-216ENST00000626000 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SNRPA1-216ENST00000626000 A8MUN3 132 aa6.65□□□□□ -1.34
SNRPA1-216ENST00000626000 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
SNRPA1-216ENST00000626000 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
SNRPA1-216ENST00000626000 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
SNRPA1-216ENST00000626000 LCA10Q71F78 164 aa6.6□□□□□ -1.35
SNRPA1-216ENST00000626000 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
SNRPA1-216ENST00000626000 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
SNRPA1-216ENST00000626000 MT-ATP8P03928 68 aa6.56□□□□□ -1.36
SNRPA1-216ENST00000626000 NDUFC1O43677 76 aa6.54□□□□□ -1.36
SNRPA1-216ENST00000626000 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
SNRPA1-216ENST00000626000 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
SNRPA1-216ENST00000626000 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
SNRPA1-216ENST00000626000 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
SNRPA1-216ENST00000626000 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
SNRPA1-216ENST00000626000 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
SNRPA1-216ENST00000626000 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
SNRPA1-216ENST00000626000 USH2AO75445 5202 aa6.44□□□□□ -1.38
SNRPA1-216ENST00000626000 H0YAA0 97 aa6.44□□□□□ -1.38
SNRPA1-216ENST00000626000 CRIPTQ9P021 101 aa6.43□□□□□ -1.38
SNRPA1-216ENST00000626000 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
SNRPA1-216ENST00000626000 SSPOA2VEC9 5147 aa6.4□□□□□ -1.39
SNRPA1-216ENST00000626000 SERP2Q8N6R1 65 aa6.37□□□□□ -1.39
SNRPA1-216ENST00000626000 ACYP2P14621 99 aa6.36□□□□□ -1.39
SNRPA1-216ENST00000626000 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
SNRPA1-216ENST00000626000 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.39
SNRPA1-216ENST00000626000 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
SNRPA1-216ENST00000626000 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
SNRPA1-216ENST00000626000 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
SNRPA1-216ENST00000626000 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
SNRPA1-216ENST00000626000 Q5VV11 94 aa6.3□□□□□ -1.4
SNRPA1-216ENST00000626000 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
SNRPA1-216ENST00000626000 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
SNRPA1-216ENST00000626000 SNURFQ9Y675 71 aa6.28□□□□□ -1.4
SNRPA1-216ENST00000626000 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
SNRPA1-216ENST00000626000 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
SNRPA1-216ENST00000626000 COX7CP15954 63 aa6.21□□□□□ -1.42
SNRPA1-216ENST00000626000 MT1BP07438 61 aa6.19□□□□□ -1.42
SNRPA1-216ENST00000626000 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
SNRPA1-216ENST00000626000 R4GN34 69 aa6.18□□□□□ -1.42
SNRPA1-216ENST00000626000 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-216ENST00000626000 A6NN06 94 aa6.13□□□□□ -1.43
SNRPA1-216ENST00000626000 P0C880 135 aa6.12□□□□□ -1.43
SNRPA1-216ENST00000626000 M0QZ58 72 aa6.09□□□□□ -1.43
SNRPA1-216ENST00000626000 ANAPC13Q9BS18 74 aa6.09□□□□□ -1.43
SNRPA1-216ENST00000626000 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
SNRPA1-216ENST00000626000 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
SNRPA1-216ENST00000626000 H7BZZ5 65 aa6.04□□□□□ -1.44
SNRPA1-216ENST00000626000 COA5Q86WW8 74 aa6.04□□□□□ -1.44
SNRPA1-216ENST00000626000 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
SNRPA1-216ENST00000626000 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
SNRPA1-216ENST00000626000 SEC61GP60059 68 aa5.99□□□□□ -1.45
SNRPA1-216ENST00000626000 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
SNRPA1-216ENST00000626000 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
SNRPA1-216ENST00000626000 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
SNRPA1-216ENST00000626000 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
SNRPA1-216ENST00000626000 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
SNRPA1-216ENST00000626000 MT1XP80297 61 aa5.85□□□□□ -1.47
SNRPA1-216ENST00000626000 TMEM258P61165 79 aa5.8□□□□□ -1.48
SNRPA1-216ENST00000626000 NEBP20929 6669 aa5.8□□□□□ -1.48
SNRPA1-216ENST00000626000 A0A1B0GU69 56 aa5.79□□□□□ -1.48
SNRPA1-216ENST00000626000 A0A1B0GU33 70 aa5.78□□□□□ -1.48
SNRPA1-216ENST00000626000 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SNRPA1-216ENST00000626000 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
SNRPA1-216ENST00000626000 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
SNRPA1-216ENST00000626000 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
SNRPA1-216ENST00000626000 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
SNRPA1-216ENST00000626000 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
SNRPA1-216ENST00000626000 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
SNRPA1-216ENST00000626000 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
SNRPA1-216ENST00000626000 A0A0D9SG42 100 aa5.65□□□□□ -1.5
SNRPA1-216ENST00000626000 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
SNRPA1-216ENST00000626000 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
SNRPA1-216ENST00000626000 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
SNRPA1-216ENST00000626000 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
SNRPA1-216ENST00000626000 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
SNRPA1-216ENST00000626000 KMT2DO14686 5537 aa5.6□□□□□ -1.51
SNRPA1-216ENST00000626000 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SNRPA1-216ENST00000626000 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
SNRPA1-216ENST00000626000 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
SNRPA1-216ENST00000626000 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
SNRPA1-216ENST00000626000 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
SNRPA1-216ENST00000626000 V9GYY9 64 aa5.52□□□□□ -1.53
SNRPA1-216ENST00000626000 UQCR11O14957 56 aa5.51□□□□□ -1.53
SNRPA1-216ENST00000626000 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
SNRPA1-216ENST00000626000 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
SNRPA1-216ENST00000626000 A8MU10 97 aa5.46□□□□□ -1.54
SNRPA1-216ENST00000626000 SPRR2EP22531 72 aa5.43□□□□□ -1.54
SNRPA1-216ENST00000626000 SPRR2BP35325 72 aa5.43□□□□□ -1.54
SNRPA1-216ENST00000626000 SPRR2AP35326 72 aa5.43□□□□□ -1.54
SNRPA1-216ENST00000626000 Q1T7F1 81 aa5.4□□□□□ -1.54
SNRPA1-216ENST00000626000 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
SNRPA1-216ENST00000626000 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms