RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 BRK1Q8WUW1 75 aa10.16□□□□□ -0.78
TREX1-205ENST00000625293 PRO0628Q9UI54 55 aa10.12□□□□□ -0.79
TREX1-205ENST00000625293 SPTSSBQ8NFR3 76 aa10.06□□□□□ -0.8
TREX1-205ENST00000625293 A0A1B0GU69 56 aa10.05□□□□□ -0.8
TREX1-205ENST00000625293 A6NED7 52 aa10.03□□□□□ -0.8
TREX1-205ENST00000625293 MUC2Q02817 5179 aa10□□□□□ -0.81
TREX1-205ENST00000625293 A8MU10 97 aa9.98□□□□□ -0.81
TREX1-205ENST00000625293 LCA10Q71F78 164 aa9.98□□□□□ -0.81
TREX1-205ENST00000625293 CDC42SE1Q9NRR8 79 aa9.93□□□□□ -0.82
TREX1-205ENST00000625293 MUC17Q685J3 4493 aa9.91□□□□□ -0.82
TREX1-205ENST00000625293 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
TREX1-205ENST00000625293 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
TREX1-205ENST00000625293 SEC61GP60059 68 aa9.86□□□□□ -0.83
TREX1-205ENST00000625293 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
TREX1-205ENST00000625293 S4R3F8 94 aa9.84□□□□□ -0.83
TREX1-205ENST00000625293 UQCR11O14957 56 aa9.8□□□□□ -0.84
TREX1-205ENST00000625293 RBM12B-AS1Q9P1G2 102 aa9.8□□□□□ -0.84
TREX1-205ENST00000625293 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
TREX1-205ENST00000625293 KRTAP4-1Q9BYQ7 146 aa9.76□□□□□ -0.85
TREX1-205ENST00000625293 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
TREX1-205ENST00000625293 A0A1B0GU33 70 aa9.66□□□□□ -0.86
TREX1-205ENST00000625293 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.87
TREX1-205ENST00000625293 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
TREX1-205ENST00000625293 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
TREX1-205ENST00000625293 H0YAA0 97 aa9.62□□□□□ -0.87
TREX1-205ENST00000625293 PMAIP1Q13794 54 aa9.6□□□□□ -0.87
TREX1-205ENST00000625293 KRTAP19-2Q3LHN2 52 aa9.59□□□□□ -0.87
TREX1-205ENST00000625293 A6NN06 94 aa9.58□□□□□ -0.88
TREX1-205ENST00000625293 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
TREX1-205ENST00000625293 P0C880 135 aa9.5□□□□□ -0.89
TREX1-205ENST00000625293 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.9
TREX1-205ENST00000625293 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
TREX1-205ENST00000625293 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
TREX1-205ENST00000625293 FLGP20930 4061 aaPredicted RBP9.38□□□□□ -0.91
TREX1-205ENST00000625293 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
TREX1-205ENST00000625293 KTN1-AS1Q86SY8 53 aa9.33□□□□□ -0.92
TREX1-205ENST00000625293 M0QZ58 72 aa9.23□□□□□ -0.93
TREX1-205ENST00000625293 A0A0D9SG42 100 aa9.22□□□□□ -0.93
TREX1-205ENST00000625293 MT1HP80294 61 aa9.22□□□□□ -0.93
TREX1-205ENST00000625293 K7ERS5 55 aa9.17□□□□□ -0.94
TREX1-205ENST00000625293 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
TREX1-205ENST00000625293 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
TREX1-205ENST00000625293 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
TREX1-205ENST00000625293 R4GN34 69 aa9.07□□□□□ -0.96
TREX1-205ENST00000625293 M0R2T5 61 aa9.04□□□□□ -0.96
TREX1-205ENST00000625293 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
TREX1-205ENST00000625293 KRTAP9-2Q9BYQ4 174 aa8.99□□□□□ -0.97
TREX1-205ENST00000625293 SPINT4Q6UDR6 99 aa8.96□□□□□ -0.98
TREX1-205ENST00000625293 LINC01554Q52M75 96 aa8.92□□□□□ -0.98
TREX1-205ENST00000625293 ROMO1P60602 79 aa8.91□□□□□ -0.98
TREX1-205ENST00000625293 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
TREX1-205ENST00000625293 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
TREX1-205ENST00000625293 KRTAP9-8Q9BYQ0 159 aa8.78□□□□□ -1
TREX1-205ENST00000625293 FSIP2Q5CZC0 6907 aa8.76□□□□□ -1.01
TREX1-205ENST00000625293 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
TREX1-205ENST00000625293 MT2AP02795 61 aa8.69□□□□□ -1.02
TREX1-205ENST00000625293 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
TREX1-205ENST00000625293 MT1FP04733 61 aa8.66□□□□□ -1.02
TREX1-205ENST00000625293 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
TREX1-205ENST00000625293 KRTAP9-6A0A140TA67 174 aa8.58□□□□□ -1.04
TREX1-205ENST00000625293 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
TREX1-205ENST00000625293 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
TREX1-205ENST00000625293 CAMK2N1Q7Z7J9 78 aa8.52□□□□□ -1.05
TREX1-205ENST00000625293 CRCT1Q9UGL9 99 aa8.52□□□□□ -1.05
TREX1-205ENST00000625293 KRTAP9-3Q9BYQ3 159 aa8.49□□□□□ -1.05
TREX1-205ENST00000625293 USH2AO75445 5202 aa8.48□□□□□ -1.05
TREX1-205ENST00000625293 LCE2BO14633 110 aa8.43□□□□□ -1.06
TREX1-205ENST00000625293 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.06
TREX1-205ENST00000625293 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
TREX1-205ENST00000625293 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
TREX1-205ENST00000625293 MT1BP07438 61 aa8.28□□□□□ -1.08
TREX1-205ENST00000625293 TNP1P09430 55 aa8.17□□□□□ -1.1
TREX1-205ENST00000625293 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
TREX1-205ENST00000625293 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
TREX1-205ENST00000625293 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
TREX1-205ENST00000625293 MT1XP80297 61 aa8.08□□□□□ -1.12
TREX1-205ENST00000625293 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
TREX1-205ENST00000625293 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
TREX1-205ENST00000625293 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
TREX1-205ENST00000625293 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
TREX1-205ENST00000625293 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
TREX1-205ENST00000625293 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
TREX1-205ENST00000625293 MACF1Q9UPN3 7388 aaKnown RBP7.81□□□□□ -1.16
TREX1-205ENST00000625293 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
TREX1-205ENST00000625293 KRTAP9-7A8MTY7 169 aa7.75□□□□□ -1.17
TREX1-205ENST00000625293 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
TREX1-205ENST00000625293 SYNE2Q8WXH0 6885 aaKnown RBP7.72□□□□□ -1.17
TREX1-205ENST00000625293 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
TREX1-205ENST00000625293 KRTAP12-3P60328 96 aa7.48□□□□□ -1.21
TREX1-205ENST00000625293 KRTAP6-3Q3LI67 103 aa7.44□□□□□ -1.22
TREX1-205ENST00000625293 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
TREX1-205ENST00000625293 KMT2DO14686 5537 aa7.41□□□□□ -1.22
TREX1-205ENST00000625293 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
TREX1-205ENST00000625293 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
TREX1-205ENST00000625293 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
TREX1-205ENST00000625293 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
TREX1-205ENST00000625293 MUC12Q9UKN1 5478 aa7.3□□□□□ -1.24
TREX1-205ENST00000625293 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
TREX1-205ENST00000625293 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
TREX1-205ENST00000625293 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms