RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SNURFQ9Y675 71 aa9.68□□□□□ -0.86
R3HCC1-210ENST00000625275 SSPOA2VEC9 5147 aa9.67□□□□□ -0.86
R3HCC1-210ENST00000625275 C20orf197Q8N268 126 aa9.67□□□□□ -0.86
R3HCC1-210ENST00000625275 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.66□□□□□ -0.86
R3HCC1-210ENST00000625275 KRTAP9-3Q9BYQ3 159 aa9.66□□□□□ -0.86
R3HCC1-210ENST00000625275 LCE2BO14633 110 aa9.65□□□□□ -0.87
R3HCC1-210ENST00000625275 COX7CP15954 63 aa9.65□□□□□ -0.87
R3HCC1-210ENST00000625275 CCDC179H3BU77 68 aa9.61□□□□□ -0.87
R3HCC1-210ENST00000625275 KRTAP9-7A8MTY7 169 aa9.59□□□□□ -0.87
R3HCC1-210ENST00000625275 A8MUN3 132 aa9.56□□□□□ -0.88
R3HCC1-210ENST00000625275 KRTAP19-1Q8IUB9 90 aa9.55□□□□□ -0.88
R3HCC1-210ENST00000625275 S4R3F8 94 aa9.55□□□□□ -0.88
R3HCC1-210ENST00000625275 LCA10Q71F78 164 aa9.52□□□□□ -0.89
R3HCC1-210ENST00000625275 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
R3HCC1-210ENST00000625275 FCGBPQ9Y6R7 5405 aaPredicted RBP9.51□□□□□ -0.89
R3HCC1-210ENST00000625275 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
R3HCC1-210ENST00000625275 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
R3HCC1-210ENST00000625275 SPANXA2-OT1Q8N9U9 137 aa9.44□□□□□ -0.9
R3HCC1-210ENST00000625275 NDUFC1O43677 76 aa9.4□□□□□ -0.9
R3HCC1-210ENST00000625275 H7BZZ5 65 aa9.4□□□□□ -0.91
R3HCC1-210ENST00000625275 CSAG1Q6PB30 78 aa9.4□□□□□ -0.91
R3HCC1-210ENST00000625275 ACYP2P14621 99 aa9.36□□□□□ -0.91
R3HCC1-210ENST00000625275 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
R3HCC1-210ENST00000625275 TMEM258P61165 79 aa9.25□□□□□ -0.93
R3HCC1-210ENST00000625275 MACF1Q9UPN3 7388 aaKnown RBP9.23□□□□□ -0.93
R3HCC1-210ENST00000625275 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
R3HCC1-210ENST00000625275 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
R3HCC1-210ENST00000625275 COA5Q86WW8 74 aa9.16□□□□□ -0.94
R3HCC1-210ENST00000625275 SYNE2Q8WXH0 6885 aaKnown RBP9.14□□□□□ -0.95
R3HCC1-210ENST00000625275 H0YAA0 97 aa9.13□□□□□ -0.95
R3HCC1-210ENST00000625275 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
R3HCC1-210ENST00000625275 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
R3HCC1-210ENST00000625275 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
R3HCC1-210ENST00000625275 KRTAP6-3Q3LI67 103 aa8.98□□□□□ -0.97
R3HCC1-210ENST00000625275 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
R3HCC1-210ENST00000625275 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
R3HCC1-210ENST00000625275 P0C880 135 aa8.96□□□□□ -0.98
R3HCC1-210ENST00000625275 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
R3HCC1-210ENST00000625275 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
R3HCC1-210ENST00000625275 MT1BP07438 61 aa8.9□□□□□ -0.98
R3HCC1-210ENST00000625275 SPRR2GQ9BYE4 73 aa8.89□□□□□ -0.99
R3HCC1-210ENST00000625275 Q5VV11 94 aa8.89□□□□□ -0.99
R3HCC1-210ENST00000625275 A6NN06 94 aa8.87□□□□□ -0.99
R3HCC1-210ENST00000625275 KRTAP19-8Q3LI54 63 aa8.87□□□□□ -0.99
R3HCC1-210ENST00000625275 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
R3HCC1-210ENST00000625275 R4GN34 69 aa8.77□□□□□ -1
R3HCC1-210ENST00000625275 M0QZ58 72 aa8.74□□□□□ -1.01
R3HCC1-210ENST00000625275 SEC61GP60059 68 aa8.74□□□□□ -1.01
R3HCC1-210ENST00000625275 KRTAP10-5P60370 271 aa8.74□□□□□ -1.01
R3HCC1-210ENST00000625275 A0A1B0GU69 56 aa8.66□□□□□ -1.02
R3HCC1-210ENST00000625275 NEBP20929 6669 aa8.63□□□□□ -1.03
R3HCC1-210ENST00000625275 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
R3HCC1-210ENST00000625275 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
R3HCC1-210ENST00000625275 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
R3HCC1-210ENST00000625275 A0A1B0GU33 70 aa8.57□□□□□ -1.04
R3HCC1-210ENST00000625275 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
R3HCC1-210ENST00000625275 Q1T7F1 81 aa8.54□□□□□ -1.04
R3HCC1-210ENST00000625275 MUC12Q9UKN1 5478 aa8.52□□□□□ -1.05
R3HCC1-210ENST00000625275 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
R3HCC1-210ENST00000625275 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
R3HCC1-210ENST00000625275 V9GYY9 64 aa8.46□□□□□ -1.05
R3HCC1-210ENST00000625275 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
R3HCC1-210ENST00000625275 KRTAP20-1Q3LI63 56 aa8.39□□□□□ -1.07
R3HCC1-210ENST00000625275 A0A0D9SG42 100 aa8.38□□□□□ -1.07
R3HCC1-210ENST00000625275 KMT2DO14686 5537 aa8.37□□□□□ -1.07
R3HCC1-210ENST00000625275 PSPHP1O15172 72 aa8.35□□□□□ -1.07
R3HCC1-210ENST00000625275 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
R3HCC1-210ENST00000625275 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
R3HCC1-210ENST00000625275 MT1XP80297 61 aa8.31□□□□□ -1.08
R3HCC1-210ENST00000625275 A8MU10 97 aa8.29□□□□□ -1.08
R3HCC1-210ENST00000625275 UQCR11O14957 56 aa8.29□□□□□ -1.08
R3HCC1-210ENST00000625275 MDN1Q9NU22 5596 aa8.26□□□□□ -1.09
R3HCC1-210ENST00000625275 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
R3HCC1-210ENST00000625275 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
R3HCC1-210ENST00000625275 SPRR2FQ96RM1 72 aa8.23□□□□□ -1.09
R3HCC1-210ENST00000625275 SPINT4Q6UDR6 99 aa8.2□□□□□ -1.1
R3HCC1-210ENST00000625275 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
R3HCC1-210ENST00000625275 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
R3HCC1-210ENST00000625275 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
R3HCC1-210ENST00000625275 SPRR2EP22531 72 aa8.14□□□□□ -1.11
R3HCC1-210ENST00000625275 SPRR2BP35325 72 aa8.14□□□□□ -1.11
R3HCC1-210ENST00000625275 SPRR2AP35326 72 aa8.14□□□□□ -1.11
R3HCC1-210ENST00000625275 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
R3HCC1-210ENST00000625275 KRTAP2-3P0C7H8 128 aa8.13□□□□□ -1.11
R3HCC1-210ENST00000625275 KRTAP2-4Q9BYR9 128 aa8.13□□□□□ -1.11
R3HCC1-210ENST00000625275 A6NED7 52 aa8.08□□□□□ -1.12
R3HCC1-210ENST00000625275 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
R3HCC1-210ENST00000625275 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
R3HCC1-210ENST00000625275 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
R3HCC1-210ENST00000625275 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
R3HCC1-210ENST00000625275 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
R3HCC1-210ENST00000625275 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
R3HCC1-210ENST00000625275 SPRR2DP22532 72 aa7.87□□□□□ -1.15
R3HCC1-210ENST00000625275 K7ERS5 55 aa7.87□□□□□ -1.15
R3HCC1-210ENST00000625275 KRTAP2-2Q9BYT5 123 aa7.86□□□□□ -1.15
R3HCC1-210ENST00000625275 KRTAP2-1Q9BYU5 128 aa7.86□□□□□ -1.15
R3HCC1-210ENST00000625275 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
R3HCC1-210ENST00000625275 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
R3HCC1-210ENST00000625275 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
R3HCC1-210ENST00000625275 TNP1P09430 55 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms