RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 LCA10Q71F78 164 aa4.17□□□□□ -1.74
TARDBP-227ENST00000622057 TAX1BP3O14907 124 aa4.16□□□□□ -1.74
TARDBP-227ENST00000622057 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
TARDBP-227ENST00000622057 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
TARDBP-227ENST00000622057 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
TARDBP-227ENST00000622057 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
TARDBP-227ENST00000622057 UBL5Q9BZL1 73 aa4.13□□□□□ -1.75
TARDBP-227ENST00000622057 SPCS1Q9Y6A9 102 aa4.12□□□□□ -1.75
TARDBP-227ENST00000622057 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
TARDBP-227ENST00000622057 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
TARDBP-227ENST00000622057 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
TARDBP-227ENST00000622057 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
TARDBP-227ENST00000622057 KMT2DO14686 5537 aa4.06□□□□□ -1.76
TARDBP-227ENST00000622057 A0A087WVE0 104 aa4.06□□□□□ -1.76
TARDBP-227ENST00000622057 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
TARDBP-227ENST00000622057 COL5A1-AS1Q5SY13 56 aa4.06□□□□□ -1.76
TARDBP-227ENST00000622057 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
TARDBP-227ENST00000622057 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
TARDBP-227ENST00000622057 CYP4F30PQ9H0H9 118 aa4.04□□□□□ -1.76
TARDBP-227ENST00000622057 K7EP34 96 aa4.03□□□□□ -1.76
TARDBP-227ENST00000622057 F8W1H4 67 aa4.01□□□□□ -1.77
TARDBP-227ENST00000622057 GTF2H5Q6ZYL4 71 aa4□□□□□ -1.77
TARDBP-227ENST00000622057 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
TARDBP-227ENST00000622057 NDUFC1O43677 76 aa3.98□□□□□ -1.77
TARDBP-227ENST00000622057 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
TARDBP-227ENST00000622057 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
TARDBP-227ENST00000622057 TRAV22A0A0B4J277 110 aa3.97□□□□□ -1.77
TARDBP-227ENST00000622057 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
TARDBP-227ENST00000622057 ACYP1P07311 99 aa3.95□□□□□ -1.78
TARDBP-227ENST00000622057 ADM2Q7Z4H4 148 aa3.95□□□□□ -1.78
TARDBP-227ENST00000622057 A8MUN3 132 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 H0YAA0 97 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 SPRR2EP22531 72 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 SPRR2BP35325 72 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 SPRR2AP35326 72 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 ETDBQ3ZM63 59 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
TARDBP-227ENST00000622057 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
TARDBP-227ENST00000622057 H0Y9P7 68 aa3.92□□□□□ -1.78
TARDBP-227ENST00000622057 ATOX1O00244 68 aa3.92□□□□□ -1.78
TARDBP-227ENST00000622057 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
TARDBP-227ENST00000622057 FAM240AA0A1B0GVK7 77 aa3.91□□□□□ -1.78
TARDBP-227ENST00000622057 UQCRQO14949 82 aa3.91□□□□□ -1.78
TARDBP-227ENST00000622057 HIST1H4AP62805 103 aaKnown RBP3.9□□□□□ -1.79
TARDBP-227ENST00000622057 MT1XP80297 61 aa3.9□□□□□ -1.79
TARDBP-227ENST00000622057 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
TARDBP-227ENST00000622057 R4GN34 69 aa3.86□□□□□ -1.79
TARDBP-227ENST00000622057 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
TARDBP-227ENST00000622057 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
TARDBP-227ENST00000622057 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
TARDBP-227ENST00000622057 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
TARDBP-227ENST00000622057 P0C880 135 aa3.83□□□□□ -1.8
TARDBP-227ENST00000622057 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
TARDBP-227ENST00000622057 M0QZ58 72 aa3.82□□□□□ -1.8
TARDBP-227ENST00000622057 LINC00643Q86TS7 51 aa3.82□□□□□ -1.8
TARDBP-227ENST00000622057 SPRR2DP22532 72 aa3.81□□□□□ -1.8
TARDBP-227ENST00000622057 PCP4L1A6NKN8 68 aa3.8□□□□□ -1.8
TARDBP-227ENST00000622057 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
TARDBP-227ENST00000622057 C20orf197Q8N268 126 aa3.8□□□□□ -1.8
TARDBP-227ENST00000622057 MP68P56378 58 aa3.79□□□□□ -1.8
TARDBP-227ENST00000622057 H3BPC8 53 aa3.77□□□□□ -1.81
TARDBP-227ENST00000622057 OCR1Q9BZK8 76 aa3.77□□□□□ -1.81
TARDBP-227ENST00000622057 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
TARDBP-227ENST00000622057 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
TARDBP-227ENST00000622057 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
TARDBP-227ENST00000622057 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
TARDBP-227ENST00000622057 MT-ATP8P03928 68 aa3.69□□□□□ -1.82
TARDBP-227ENST00000622057 TRAV7A0A075B6U4 112 aa3.67□□□□□ -1.82
TARDBP-227ENST00000622057 J3QR89 54 aa3.67□□□□□ -1.82
TARDBP-227ENST00000622057 SCGB1A1P11684 91 aa3.66□□□□□ -1.82
TARDBP-227ENST00000622057 ACYP2P14621 99 aa3.63□□□□□ -1.83
TARDBP-227ENST00000622057 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
TARDBP-227ENST00000622057 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
TARDBP-227ENST00000622057 SMIM20Q8N5G0 67 aa3.59□□□□□ -1.83
TARDBP-227ENST00000622057 A0A1B0GV90 55 aa3.58□□□□□ -1.84
TARDBP-227ENST00000622057 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
TARDBP-227ENST00000622057 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
TARDBP-227ENST00000622057 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
TARDBP-227ENST00000622057 KRTAP13-4Q3LI77 160 aa3.5□□□□□ -1.85
TARDBP-227ENST00000622057 SPANXA2-OT1Q8N9U9 137 aa3.5□□□□□ -1.85
TARDBP-227ENST00000622057 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
TARDBP-227ENST00000622057 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
TARDBP-227ENST00000622057 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
TARDBP-227ENST00000622057 K7ERU9 68 aa3.47□□□□□ -1.85
TARDBP-227ENST00000622057 MT1EP04732 61 aa3.47□□□□□ -1.85
TARDBP-227ENST00000622057 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
TARDBP-227ENST00000622057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-227ENST00000622057 A0A0D9SG42 100 aa3.42□□□□□ -1.86
TARDBP-227ENST00000622057 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
TARDBP-227ENST00000622057 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
TARDBP-227ENST00000622057 MT1GP13640 62 aa3.39□□□□□ -1.87
TARDBP-227ENST00000622057 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
TARDBP-227ENST00000622057 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
TARDBP-227ENST00000622057 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
TARDBP-227ENST00000622057 SEC61GP60059 68 aa3.37□□□□□ -1.87
TARDBP-227ENST00000622057 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
TARDBP-227ENST00000622057 SERP1Q9Y6X1 66 aa3.37□□□□□ -1.87
TARDBP-227ENST00000622057 MT4P47944 62 aa3.36□□□□□ -1.87
TARDBP-227ENST00000622057 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
TARDBP-227ENST00000622057 COA5Q86WW8 74 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms