RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
SCAMP4-213ENST00000621748 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
SCAMP4-213ENST00000621748 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
SCAMP4-213ENST00000621748 COX7CP15954 63 aa8.56□□□□□ -1.04
SCAMP4-213ENST00000621748 KRTAP19-1Q8IUB9 90 aa8.54□□□□□ -1.04
SCAMP4-213ENST00000621748 SNURFQ9Y675 71 aa8.54□□□□□ -1.04
SCAMP4-213ENST00000621748 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
SCAMP4-213ENST00000621748 A8MUN3 132 aa8.52□□□□□ -1.05
SCAMP4-213ENST00000621748 S4R3F8 94 aa8.47□□□□□ -1.05
SCAMP4-213ENST00000621748 NDUFC1O43677 76 aa8.44□□□□□ -1.06
SCAMP4-213ENST00000621748 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
SCAMP4-213ENST00000621748 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
SCAMP4-213ENST00000621748 ACYP2P14621 99 aa8.38□□□□□ -1.07
SCAMP4-213ENST00000621748 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
SCAMP4-213ENST00000621748 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
SCAMP4-213ENST00000621748 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
SCAMP4-213ENST00000621748 KRTAP19-6Q3LI70 58 aa8.36□□□□□ -1.07
SCAMP4-213ENST00000621748 LCA10Q71F78 164 aa8.34□□□□□ -1.07
SCAMP4-213ENST00000621748 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
SCAMP4-213ENST00000621748 CHKB-CPT1BH3BT56 60 aa8.3□□□□□ -1.08
SCAMP4-213ENST00000621748 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
SCAMP4-213ENST00000621748 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
SCAMP4-213ENST00000621748 SYNE2Q8WXH0 6885 aaKnown RBP8.25□□□□□ -1.09
SCAMP4-213ENST00000621748 H7BZZ5 65 aa8.24□□□□□ -1.09
SCAMP4-213ENST00000621748 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
SCAMP4-213ENST00000621748 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
SCAMP4-213ENST00000621748 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.1
SCAMP4-213ENST00000621748 COA5Q86WW8 74 aa8.11□□□□□ -1.11
SCAMP4-213ENST00000621748 TMEM258P61165 79 aa8.09□□□□□ -1.11
SCAMP4-213ENST00000621748 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
SCAMP4-213ENST00000621748 MT1BP07438 61 aa8.07□□□□□ -1.12
SCAMP4-213ENST00000621748 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
SCAMP4-213ENST00000621748 H0YAA0 97 aa8.03□□□□□ -1.12
SCAMP4-213ENST00000621748 PCP4P48539 62 aa8.03□□□□□ -1.12
SCAMP4-213ENST00000621748 Q5VV11 94 aa8.02□□□□□ -1.13
SCAMP4-213ENST00000621748 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
SCAMP4-213ENST00000621748 A6NN06 94 aa7.96□□□□□ -1.14
SCAMP4-213ENST00000621748 KRTAP6-3Q3LI67 103 aa7.96□□□□□ -1.14
SCAMP4-213ENST00000621748 SEC61GP60059 68 aa7.95□□□□□ -1.14
SCAMP4-213ENST00000621748 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
SCAMP4-213ENST00000621748 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
SCAMP4-213ENST00000621748 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
SCAMP4-213ENST00000621748 R4GN34 69 aa7.83□□□□□ -1.16
SCAMP4-213ENST00000621748 P0C880 135 aa7.81□□□□□ -1.16
SCAMP4-213ENST00000621748 A0A1B0GU69 56 aa7.77□□□□□ -1.17
SCAMP4-213ENST00000621748 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
SCAMP4-213ENST00000621748 M0QZ58 72 aa7.76□□□□□ -1.17
SCAMP4-213ENST00000621748 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
SCAMP4-213ENST00000621748 MUC12Q9UKN1 5478 aa7.76□□□□□ -1.17
SCAMP4-213ENST00000621748 NEBP20929 6669 aa7.74□□□□□ -1.17
SCAMP4-213ENST00000621748 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
SCAMP4-213ENST00000621748 V9GYY9 64 aa7.65□□□□□ -1.18
SCAMP4-213ENST00000621748 A0A1B0GU33 70 aa7.64□□□□□ -1.19
SCAMP4-213ENST00000621748 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
SCAMP4-213ENST00000621748 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
SCAMP4-213ENST00000621748 KRTAP5-9P26371 169 aa7.59□□□□□ -1.19
SCAMP4-213ENST00000621748 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
SCAMP4-213ENST00000621748 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
SCAMP4-213ENST00000621748 KMT2DO14686 5537 aa7.57□□□□□ -1.2
SCAMP4-213ENST00000621748 MT1XP80297 61 aa7.55□□□□□ -1.2
SCAMP4-213ENST00000621748 MDN1Q9NU22 5596 aa7.53□□□□□ -1.2
SCAMP4-213ENST00000621748 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
SCAMP4-213ENST00000621748 Q1T7F1 81 aa7.5□□□□□ -1.21
SCAMP4-213ENST00000621748 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
SCAMP4-213ENST00000621748 A0A0D9SG42 100 aa7.44□□□□□ -1.22
SCAMP4-213ENST00000621748 UQCR11O14957 56 aa7.44□□□□□ -1.22
SCAMP4-213ENST00000621748 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
SCAMP4-213ENST00000621748 PSPHP1O15172 72 aa7.43□□□□□ -1.22
SCAMP4-213ENST00000621748 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
SCAMP4-213ENST00000621748 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
SCAMP4-213ENST00000621748 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
SCAMP4-213ENST00000621748 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
SCAMP4-213ENST00000621748 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
SCAMP4-213ENST00000621748 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
SCAMP4-213ENST00000621748 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
SCAMP4-213ENST00000621748 A6NED7 52 aa7.28□□□□□ -1.24
SCAMP4-213ENST00000621748 A8MU10 97 aa7.27□□□□□ -1.25
SCAMP4-213ENST00000621748 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
SCAMP4-213ENST00000621748 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
SCAMP4-213ENST00000621748 SPRR2EP22531 72 aa7.25□□□□□ -1.25
SCAMP4-213ENST00000621748 SPRR2BP35325 72 aa7.25□□□□□ -1.25
SCAMP4-213ENST00000621748 SPRR2AP35326 72 aa7.25□□□□□ -1.25
SCAMP4-213ENST00000621748 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
SCAMP4-213ENST00000621748 K7ERS5 55 aa7.21□□□□□ -1.26
SCAMP4-213ENST00000621748 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
SCAMP4-213ENST00000621748 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
SCAMP4-213ENST00000621748 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
SCAMP4-213ENST00000621748 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
SCAMP4-213ENST00000621748 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
SCAMP4-213ENST00000621748 SPRR2DP22532 72 aa7□□□□□ -1.29
SCAMP4-213ENST00000621748 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
SCAMP4-213ENST00000621748 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
SCAMP4-213ENST00000621748 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
SCAMP4-213ENST00000621748 TNP1P09430 55 aa6.86□□□□□ -1.31
SCAMP4-213ENST00000621748 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
SCAMP4-213ENST00000621748 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
SCAMP4-213ENST00000621748 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
SCAMP4-213ENST00000621748 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
SCAMP4-213ENST00000621748 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
SCAMP4-213ENST00000621748 MT1EP04732 61 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms