RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 A6NN06 94 aa9.8□□□□□ -0.84
SEMA6C-210ENST00000621728 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
SEMA6C-210ENST00000621728 LCA10Q71F78 164 aa9.74□□□□□ -0.85
SEMA6C-210ENST00000621728 CDC42SE1Q9NRR8 79 aa9.74□□□□□ -0.85
SEMA6C-210ENST00000621728 SPINK7P58062 85 aa9.72□□□□□ -0.85
SEMA6C-210ENST00000621728 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
SEMA6C-210ENST00000621728 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
SEMA6C-210ENST00000621728 A6NED7 52 aa9.68□□□□□ -0.86
SEMA6C-210ENST00000621728 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
SEMA6C-210ENST00000621728 A8MU10 97 aa9.67□□□□□ -0.86
SEMA6C-210ENST00000621728 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
SEMA6C-210ENST00000621728 UBR4Q5T4S7 5183 aa9.53□□□□□ -0.88
SEMA6C-210ENST00000621728 MUC2Q02817 5179 aa9.51□□□□□ -0.89
SEMA6C-210ENST00000621728 A0A1B0GU69 56 aa9.5□□□□□ -0.89
SEMA6C-210ENST00000621728 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.89
SEMA6C-210ENST00000621728 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
SEMA6C-210ENST00000621728 H3BS24 57 aa9.43□□□□□ -0.9
SEMA6C-210ENST00000621728 COX6B2Q6YFQ2 88 aa9.43□□□□□ -0.9
SEMA6C-210ENST00000621728 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
SEMA6C-210ENST00000621728 UQCR11O14957 56 aa9.35□□□□□ -0.91
SEMA6C-210ENST00000621728 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
SEMA6C-210ENST00000621728 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
SEMA6C-210ENST00000621728 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
SEMA6C-210ENST00000621728 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
SEMA6C-210ENST00000621728 PRAC1Q96KF2 57 aa9.2□□□□□ -0.94
SEMA6C-210ENST00000621728 S4R3F8 94 aa9.16□□□□□ -0.94
SEMA6C-210ENST00000621728 LCE2CQ5TA81 110 aa9.15□□□□□ -0.94
SEMA6C-210ENST00000621728 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
SEMA6C-210ENST00000621728 FLGP20930 4061 aaPredicted RBP9.12□□□□□ -0.95
SEMA6C-210ENST00000621728 FAT4Q6V0I7 4981 aa9.11□□□□□ -0.95
SEMA6C-210ENST00000621728 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
SEMA6C-210ENST00000621728 A0A1B0GU33 70 aa9.05□□□□□ -0.96
SEMA6C-210ENST00000621728 MT1HP80294 61 aa8.96□□□□□ -0.97
SEMA6C-210ENST00000621728 H0YAA0 97 aa8.95□□□□□ -0.98
SEMA6C-210ENST00000621728 CSAG1Q6PB30 78 aa8.93□□□□□ -0.98
SEMA6C-210ENST00000621728 M0R2T5 61 aa8.85□□□□□ -0.99
SEMA6C-210ENST00000621728 KRTAP10-6P60371 365 aaPredicted RBP8.81□□□□□ -1
SEMA6C-210ENST00000621728 K7ERS5 55 aa8.8□□□□□ -1
SEMA6C-210ENST00000621728 ROMO1P60602 79 aa8.77□□□□□ -1.01
SEMA6C-210ENST00000621728 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
SEMA6C-210ENST00000621728 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
SEMA6C-210ENST00000621728 P0C880 135 aa8.72□□□□□ -1.01
SEMA6C-210ENST00000621728 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
SEMA6C-210ENST00000621728 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
SEMA6C-210ENST00000621728 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
SEMA6C-210ENST00000621728 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
SEMA6C-210ENST00000621728 MT2AP02795 61 aa8.58□□□□□ -1.04
SEMA6C-210ENST00000621728 M0QZ58 72 aa8.56□□□□□ -1.04
SEMA6C-210ENST00000621728 MT1FP04733 61 aa8.55□□□□□ -1.04
SEMA6C-210ENST00000621728 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
SEMA6C-210ENST00000621728 A0A0D9SG42 100 aa8.48□□□□□ -1.05
SEMA6C-210ENST00000621728 R4GN34 69 aa8.42□□□□□ -1.06
SEMA6C-210ENST00000621728 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
SEMA6C-210ENST00000621728 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
SEMA6C-210ENST00000621728 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
SEMA6C-210ENST00000621728 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
SEMA6C-210ENST00000621728 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
SEMA6C-210ENST00000621728 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
SEMA6C-210ENST00000621728 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
SEMA6C-210ENST00000621728 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
SEMA6C-210ENST00000621728 LCE2BO14633 110 aa8.13□□□□□ -1.11
SEMA6C-210ENST00000621728 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
SEMA6C-210ENST00000621728 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
SEMA6C-210ENST00000621728 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
SEMA6C-210ENST00000621728 MT1BP07438 61 aa8.05□□□□□ -1.12
SEMA6C-210ENST00000621728 USH2AO75445 5202 aa8□□□□□ -1.13
SEMA6C-210ENST00000621728 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
SEMA6C-210ENST00000621728 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
SEMA6C-210ENST00000621728 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.14
SEMA6C-210ENST00000621728 CAMK2N1Q7Z7J9 78 aa7.88□□□□□ -1.15
SEMA6C-210ENST00000621728 FSIP2Q5CZC0 6907 aa7.79□□□□□ -1.16
SEMA6C-210ENST00000621728 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
SEMA6C-210ENST00000621728 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
SEMA6C-210ENST00000621728 MT1XP80297 61 aa7.75□□□□□ -1.17
SEMA6C-210ENST00000621728 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
SEMA6C-210ENST00000621728 PP632Q6XCG6 107 aa7.74□□□□□ -1.17
SEMA6C-210ENST00000621728 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
SEMA6C-210ENST00000621728 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
SEMA6C-210ENST00000621728 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
SEMA6C-210ENST00000621728 TNP1P09430 55 aa7.57□□□□□ -1.2
SEMA6C-210ENST00000621728 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
SEMA6C-210ENST00000621728 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
SEMA6C-210ENST00000621728 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
SEMA6C-210ENST00000621728 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
SEMA6C-210ENST00000621728 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
SEMA6C-210ENST00000621728 KMT2DO14686 5537 aa7.29□□□□□ -1.24
SEMA6C-210ENST00000621728 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
SEMA6C-210ENST00000621728 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
SEMA6C-210ENST00000621728 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
SEMA6C-210ENST00000621728 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
SEMA6C-210ENST00000621728 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
SEMA6C-210ENST00000621728 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
SEMA6C-210ENST00000621728 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
SEMA6C-210ENST00000621728 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
SEMA6C-210ENST00000621728 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
SEMA6C-210ENST00000621728 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
SEMA6C-210ENST00000621728 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
SEMA6C-210ENST00000621728 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
SEMA6C-210ENST00000621728 MT1EP04732 61 aa6.79□□□□□ -1.32
SEMA6C-210ENST00000621728 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms