RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 A8MUN3 132 aa6.46□□□□□ -1.38
MUC1-229ENST00000620770 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
MUC1-229ENST00000620770 COX7CP15954 63 aa6.45□□□□□ -1.38
MUC1-229ENST00000620770 ANAPC13Q9BS18 74 aa6.44□□□□□ -1.38
MUC1-229ENST00000620770 MT2AP02795 61 aa6.43□□□□□ -1.38
MUC1-229ENST00000620770 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
MUC1-229ENST00000620770 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
MUC1-229ENST00000620770 MT1FP04733 61 aa6.39□□□□□ -1.39
MUC1-229ENST00000620770 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
MUC1-229ENST00000620770 NDUFC1O43677 76 aa6.38□□□□□ -1.39
MUC1-229ENST00000620770 USH2AO75445 5202 aa6.37□□□□□ -1.39
MUC1-229ENST00000620770 ACYP2P14621 99 aa6.33□□□□□ -1.4
MUC1-229ENST00000620770 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
MUC1-229ENST00000620770 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
MUC1-229ENST00000620770 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
MUC1-229ENST00000620770 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
MUC1-229ENST00000620770 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
MUC1-229ENST00000620770 CHKB-CPT1BH3BT56 60 aa6.27□□□□□ -1.41
MUC1-229ENST00000620770 H7BZZ5 65 aa6.27□□□□□ -1.41
MUC1-229ENST00000620770 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
MUC1-229ENST00000620770 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
MUC1-229ENST00000620770 LCE2BO14633 110 aa6.24□□□□□ -1.41
MUC1-229ENST00000620770 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
MUC1-229ENST00000620770 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
MUC1-229ENST00000620770 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
MUC1-229ENST00000620770 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
MUC1-229ENST00000620770 COA5Q86WW8 74 aa6.19□□□□□ -1.42
MUC1-229ENST00000620770 H0YAA0 97 aa6.16□□□□□ -1.42
MUC1-229ENST00000620770 P0C880 135 aa6.09□□□□□ -1.43
MUC1-229ENST00000620770 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
MUC1-229ENST00000620770 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
MUC1-229ENST00000620770 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
MUC1-229ENST00000620770 TMEM258P61165 79 aa6.05□□□□□ -1.44
MUC1-229ENST00000620770 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
MUC1-229ENST00000620770 MACF1Q9UPN3 7388 aaKnown RBP6.04□□□□□ -1.44
MUC1-229ENST00000620770 M0QZ58 72 aa5.99□□□□□ -1.45
MUC1-229ENST00000620770 R4GN34 69 aa5.99□□□□□ -1.45
MUC1-229ENST00000620770 Q5VV11 94 aa5.98□□□□□ -1.45
MUC1-229ENST00000620770 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.45
MUC1-229ENST00000620770 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
MUC1-229ENST00000620770 PCP4P48539 62 aa5.95□□□□□ -1.46
MUC1-229ENST00000620770 MT1BP07438 61 aa5.94□□□□□ -1.46
MUC1-229ENST00000620770 SEC61GP60059 68 aa5.94□□□□□ -1.46
MUC1-229ENST00000620770 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
MUC1-229ENST00000620770 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
MUC1-229ENST00000620770 A0A1B0GU69 56 aa5.86□□□□□ -1.47
MUC1-229ENST00000620770 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
MUC1-229ENST00000620770 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
MUC1-229ENST00000620770 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
MUC1-229ENST00000620770 A0A1B0GU33 70 aa5.79□□□□□ -1.48
MUC1-229ENST00000620770 A6NN06 94 aa5.79□□□□□ -1.48
MUC1-229ENST00000620770 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
MUC1-229ENST00000620770 LINC01558Q9Y6Z2 57 aa5.77□□□□□ -1.49
MUC1-229ENST00000620770 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
MUC1-229ENST00000620770 A0A0D9SG42 100 aa5.73□□□□□ -1.49
MUC1-229ENST00000620770 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
MUC1-229ENST00000620770 MT1XP80297 61 aa5.66□□□□□ -1.5
MUC1-229ENST00000620770 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
MUC1-229ENST00000620770 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
MUC1-229ENST00000620770 V9GYY9 64 aa5.64□□□□□ -1.51
MUC1-229ENST00000620770 NEBP20929 6669 aa5.63□□□□□ -1.51
MUC1-229ENST00000620770 A8MU10 97 aa5.63□□□□□ -1.51
MUC1-229ENST00000620770 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
MUC1-229ENST00000620770 PSPHP1O15172 72 aa5.61□□□□□ -1.51
MUC1-229ENST00000620770 Q1T7F1 81 aa5.61□□□□□ -1.51
MUC1-229ENST00000620770 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
MUC1-229ENST00000620770 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
MUC1-229ENST00000620770 RPS28P62857 69 aaKnown RBP5.59□□□□□ -1.51
MUC1-229ENST00000620770 UQCR11O14957 56 aa5.57□□□□□ -1.52
MUC1-229ENST00000620770 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
MUC1-229ENST00000620770 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
MUC1-229ENST00000620770 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
MUC1-229ENST00000620770 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
MUC1-229ENST00000620770 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
MUC1-229ENST00000620770 KMT2DO14686 5537 aa5.46□□□□□ -1.54
MUC1-229ENST00000620770 A6NED7 52 aa5.44□□□□□ -1.54
MUC1-229ENST00000620770 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
MUC1-229ENST00000620770 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
MUC1-229ENST00000620770 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
MUC1-229ENST00000620770 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
MUC1-229ENST00000620770 K7ERS5 55 aa5.33□□□□□ -1.56
MUC1-229ENST00000620770 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
MUC1-229ENST00000620770 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
MUC1-229ENST00000620770 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
MUC1-229ENST00000620770 SPRR2EP22531 72 aa5.31□□□□□ -1.56
MUC1-229ENST00000620770 SPRR2BP35325 72 aa5.31□□□□□ -1.56
MUC1-229ENST00000620770 SPRR2AP35326 72 aa5.31□□□□□ -1.56
MUC1-229ENST00000620770 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
MUC1-229ENST00000620770 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
MUC1-229ENST00000620770 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
MUC1-229ENST00000620770 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
MUC1-229ENST00000620770 TNP1P09430 55 aa5.21□□□□□ -1.58
MUC1-229ENST00000620770 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
MUC1-229ENST00000620770 SPRR2DP22532 72 aa5.14□□□□□ -1.59
MUC1-229ENST00000620770 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
MUC1-229ENST00000620770 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
MUC1-229ENST00000620770 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
MUC1-229ENST00000620770 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
MUC1-229ENST00000620770 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
MUC1-229ENST00000620770 ROMO1P60602 79 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms