RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FAT4Q6V0I7 4981 aa11.37□□□□□ -0.59
SGMS1-210ENST00000619438 KRTAP4-1Q9BYQ7 146 aa11.34□□□□□ -0.59
SGMS1-210ENST00000619438 RPL37P61927 97 aaKnown RBP11.3□□□□□ -0.6
SGMS1-210ENST00000619438 SPINK7P58062 85 aa11.27□□□□□ -0.6
SGMS1-210ENST00000619438 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.61
SGMS1-210ENST00000619438 A6NED7 52 aa11.22□□□□□ -0.61
SGMS1-210ENST00000619438 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
SGMS1-210ENST00000619438 CDC42SE1Q9NRR8 79 aa11.16□□□□□ -0.62
SGMS1-210ENST00000619438 LCA10Q71F78 164 aa11.15□□□□□ -0.62
SGMS1-210ENST00000619438 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
SGMS1-210ENST00000619438 A0A1B0GU69 56 aa11.14□□□□□ -0.63
SGMS1-210ENST00000619438 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
SGMS1-210ENST00000619438 A8MU10 97 aa11.1□□□□□ -0.63
SGMS1-210ENST00000619438 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
SGMS1-210ENST00000619438 LCE2CQ5TA81 110 aa11□□□□□ -0.65
SGMS1-210ENST00000619438 KRTAP19-2Q3LHN2 52 aa10.99□□□□□ -0.65
SGMS1-210ENST00000619438 SEC61GP60059 68 aa10.94□□□□□ -0.66
SGMS1-210ENST00000619438 UQCR11O14957 56 aa10.93□□□□□ -0.66
SGMS1-210ENST00000619438 KRTAP9-2Q9BYQ4 174 aa10.93□□□□□ -0.66
SGMS1-210ENST00000619438 SPATA8Q6RVD6 105 aa10.92□□□□□ -0.66
SGMS1-210ENST00000619438 PMAIP1Q13794 54 aa10.89□□□□□ -0.67
SGMS1-210ENST00000619438 MT1HP80294 61 aa10.88□□□□□ -0.67
SGMS1-210ENST00000619438 MIR22HGQ0VDD5 57 aa10.83□□□□□ -0.68
SGMS1-210ENST00000619438 M0R2T5 61 aa10.82□□□□□ -0.68
SGMS1-210ENST00000619438 A6NN06 94 aa10.8□□□□□ -0.68
SGMS1-210ENST00000619438 KRTAP3-3Q9BYR6 98 aa10.73□□□□□ -0.69
SGMS1-210ENST00000619438 FLGP20930 4061 aaPredicted RBP10.71□□□□□ -0.7
SGMS1-210ENST00000619438 S4R3F8 94 aa10.69□□□□□ -0.7
SGMS1-210ENST00000619438 RBM12B-AS1Q9P1G2 102 aa10.68□□□□□ -0.7
SGMS1-210ENST00000619438 A0A1B0GU33 70 aa10.66□□□□□ -0.7
SGMS1-210ENST00000619438 H1FX-AS1Q4G0G2 97 aa10.66□□□□□ -0.7
SGMS1-210ENST00000619438 KRTAP10-6P60371 365 aaPredicted RBP10.64□□□□□ -0.71
SGMS1-210ENST00000619438 LORP23490 312 aaPredicted RBP10.63□□□□□ -0.71
SGMS1-210ENST00000619438 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
SGMS1-210ENST00000619438 KTN1-AS1Q86SY8 53 aa10.62□□□□□ -0.71
SGMS1-210ENST00000619438 H0YAA0 97 aa10.6□□□□□ -0.71
SGMS1-210ENST00000619438 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
SGMS1-210ENST00000619438 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
SGMS1-210ENST00000619438 FSIP2Q5CZC0 6907 aa10.43□□□□□ -0.74
SGMS1-210ENST00000619438 CSAG1Q6PB30 78 aa10.4□□□□□ -0.74
SGMS1-210ENST00000619438 CRCT1Q9UGL9 99 aa10.34□□□□□ -0.75
SGMS1-210ENST00000619438 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
SGMS1-210ENST00000619438 P0C880 135 aa10.31□□□□□ -0.76
SGMS1-210ENST00000619438 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
SGMS1-210ENST00000619438 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
SGMS1-210ENST00000619438 K7ERS5 55 aa10.25□□□□□ -0.77
SGMS1-210ENST00000619438 MT2AP02795 61 aa10.19□□□□□ -0.78
SGMS1-210ENST00000619438 KRTAP10-10P60014 251 aa10.15□□□□□ -0.78
SGMS1-210ENST00000619438 M0QZ58 72 aa10.12□□□□□ -0.79
SGMS1-210ENST00000619438 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
SGMS1-210ENST00000619438 MT1FP04733 61 aa10.11□□□□□ -0.79
SGMS1-210ENST00000619438 A0A0D9SG42 100 aa10.08□□□□□ -0.8
SGMS1-210ENST00000619438 USH2AO75445 5202 aa10□□□□□ -0.81
SGMS1-210ENST00000619438 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
SGMS1-210ENST00000619438 KRTAP12-1P59990 96 aa9.93□□□□□ -0.82
SGMS1-210ENST00000619438 ROMO1P60602 79 aa9.93□□□□□ -0.82
SGMS1-210ENST00000619438 LCE2BO14633 110 aa9.92□□□□□ -0.82
SGMS1-210ENST00000619438 KRTAP12-2P59991 146 aa9.91□□□□□ -0.82
SGMS1-210ENST00000619438 SSPOA2VEC9 5147 aa9.89□□□□□ -0.83
SGMS1-210ENST00000619438 R4GN34 69 aa9.87□□□□□ -0.83
SGMS1-210ENST00000619438 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
SGMS1-210ENST00000619438 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
SGMS1-210ENST00000619438 LINC01554Q52M75 96 aa9.74□□□□□ -0.85
SGMS1-210ENST00000619438 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.85
SGMS1-210ENST00000619438 FCGBPQ9Y6R7 5405 aaPredicted RBP9.66□□□□□ -0.86
SGMS1-210ENST00000619438 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
SGMS1-210ENST00000619438 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.62□□□□□ -0.87
SGMS1-210ENST00000619438 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
SGMS1-210ENST00000619438 KRTAP9-7A8MTY7 169 aa9.48□□□□□ -0.89
SGMS1-210ENST00000619438 SPRR2GQ9BYE4 73 aa9.45□□□□□ -0.9
SGMS1-210ENST00000619438 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
SGMS1-210ENST00000619438 KRTAP19-8Q3LI54 63 aa9.33□□□□□ -0.92
SGMS1-210ENST00000619438 MT1BP07438 61 aa9.31□□□□□ -0.92
SGMS1-210ENST00000619438 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
SGMS1-210ENST00000619438 CAMK2N1Q7Z7J9 78 aa9.29□□□□□ -0.92
SGMS1-210ENST00000619438 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
SGMS1-210ENST00000619438 KRTAP10-5P60370 271 aa9.08□□□□□ -0.96
SGMS1-210ENST00000619438 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
SGMS1-210ENST00000619438 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
SGMS1-210ENST00000619438 KRTAP6-3Q3LI67 103 aa9□□□□□ -0.97
SGMS1-210ENST00000619438 TNP1P09430 55 aa8.96□□□□□ -0.98
SGMS1-210ENST00000619438 KRTAP23-1A1A580 65 aa8.94□□□□□ -0.98
SGMS1-210ENST00000619438 PRO2289Q9P1D8 64 aa8.9□□□□□ -0.98
SGMS1-210ENST00000619438 KRTAP15-1Q3LI76 137 aa8.84□□□□□ -0.99
SGMS1-210ENST00000619438 MT1XP80297 61 aa8.79□□□□□ -1
SGMS1-210ENST00000619438 MUC12Q9UKN1 5478 aa8.67□□□□□ -1.02
SGMS1-210ENST00000619438 KRTAP5-9P26371 169 aa8.62□□□□□ -1.03
SGMS1-210ENST00000619438 KMT2DO14686 5537 aa8.58□□□□□ -1.04
SGMS1-210ENST00000619438 NEBP20929 6669 aa8.55□□□□□ -1.04
SGMS1-210ENST00000619438 LCE3AQ5TA76 89 aa8.48□□□□□ -1.05
SGMS1-210ENST00000619438 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
SGMS1-210ENST00000619438 MDN1Q9NU22 5596 aa8.47□□□□□ -1.05
SGMS1-210ENST00000619438 SPRR2FQ96RM1 72 aa8.43□□□□□ -1.06
SGMS1-210ENST00000619438 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
SGMS1-210ENST00000619438 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
SGMS1-210ENST00000619438 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
SGMS1-210ENST00000619438 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
SGMS1-210ENST00000619438 NDUFAF8A1L188 74 aa8.34□□□□□ -1.08
SGMS1-210ENST00000619438 KRTAP20-1Q3LI63 56 aa8.31□□□□□ -1.08
SGMS1-210ENST00000619438 SPRR2EP22531 72 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms