RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
APOBEC3A-205ENST00000618553 COX7CP15954 63 aa6.75□□□□□ -1.33
APOBEC3A-205ENST00000618553 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
APOBEC3A-205ENST00000618553 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
APOBEC3A-205ENST00000618553 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
APOBEC3A-205ENST00000618553 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
APOBEC3A-205ENST00000618553 ANAPC13Q9BS18 74 aa6.74□□□□□ -1.33
APOBEC3A-205ENST00000618553 HRES1P13985 223 aa6.73□□□□□ -1.33
APOBEC3A-205ENST00000618553 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
APOBEC3A-205ENST00000618553 KLKP1Q107X0 134 aa6.7□□□□□ -1.34
APOBEC3A-205ENST00000618553 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
APOBEC3A-205ENST00000618553 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
APOBEC3A-205ENST00000618553 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
APOBEC3A-205ENST00000618553 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
APOBEC3A-205ENST00000618553 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
APOBEC3A-205ENST00000618553 NDUFC1O43677 76 aa6.6□□□□□ -1.35
APOBEC3A-205ENST00000618553 CCDC179H3BU77 68 aa6.59□□□□□ -1.35
APOBEC3A-205ENST00000618553 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
APOBEC3A-205ENST00000618553 H7BZZ5 65 aa6.56□□□□□ -1.36
APOBEC3A-205ENST00000618553 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
APOBEC3A-205ENST00000618553 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
APOBEC3A-205ENST00000618553 A8MUN3 132 aa6.54□□□□□ -1.36
APOBEC3A-205ENST00000618553 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
APOBEC3A-205ENST00000618553 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
APOBEC3A-205ENST00000618553 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
APOBEC3A-205ENST00000618553 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
APOBEC3A-205ENST00000618553 PCP4P48539 62 aa6.49□□□□□ -1.37
APOBEC3A-205ENST00000618553 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
APOBEC3A-205ENST00000618553 MT1HP80294 61 aa6.46□□□□□ -1.38
APOBEC3A-205ENST00000618553 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
APOBEC3A-205ENST00000618553 TMEM258P61165 79 aa6.42□□□□□ -1.38
APOBEC3A-205ENST00000618553 ACYP2P14621 99 aa6.41□□□□□ -1.38
APOBEC3A-205ENST00000618553 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
APOBEC3A-205ENST00000618553 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
APOBEC3A-205ENST00000618553 S4R3F8 94 aa6.38□□□□□ -1.39
APOBEC3A-205ENST00000618553 LCA10Q71F78 164 aa6.36□□□□□ -1.39
APOBEC3A-205ENST00000618553 COA5Q86WW8 74 aa6.3□□□□□ -1.4
APOBEC3A-205ENST00000618553 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
APOBEC3A-205ENST00000618553 M0R2T5 61 aa6.26□□□□□ -1.41
APOBEC3A-205ENST00000618553 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
APOBEC3A-205ENST00000618553 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
APOBEC3A-205ENST00000618553 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
APOBEC3A-205ENST00000618553 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
APOBEC3A-205ENST00000618553 USH2AO75445 5202 aa6.22□□□□□ -1.41
APOBEC3A-205ENST00000618553 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
APOBEC3A-205ENST00000618553 H0YAA0 97 aa6.19□□□□□ -1.42
APOBEC3A-205ENST00000618553 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
APOBEC3A-205ENST00000618553 MT2AP02795 61 aa6.12□□□□□ -1.43
APOBEC3A-205ENST00000618553 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
APOBEC3A-205ENST00000618553 MT1FP04733 61 aa6.07□□□□□ -1.44
APOBEC3A-205ENST00000618553 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
APOBEC3A-205ENST00000618553 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
APOBEC3A-205ENST00000618553 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
APOBEC3A-205ENST00000618553 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
APOBEC3A-205ENST00000618553 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
APOBEC3A-205ENST00000618553 P0C880 135 aa6□□□□□ -1.45
APOBEC3A-205ENST00000618553 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
APOBEC3A-205ENST00000618553 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
APOBEC3A-205ENST00000618553 SEC61GP60059 68 aa5.97□□□□□ -1.45
APOBEC3A-205ENST00000618553 Q1T7F1 81 aa5.96□□□□□ -1.46
APOBEC3A-205ENST00000618553 V9GYY9 64 aa5.96□□□□□ -1.46
APOBEC3A-205ENST00000618553 A0A1B0GU69 56 aa5.95□□□□□ -1.46
APOBEC3A-205ENST00000618553 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
APOBEC3A-205ENST00000618553 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
APOBEC3A-205ENST00000618553 M0QZ58 72 aa5.87□□□□□ -1.47
APOBEC3A-205ENST00000618553 R4GN34 69 aa5.86□□□□□ -1.47
APOBEC3A-205ENST00000618553 A0A1B0GU33 70 aa5.85□□□□□ -1.47
APOBEC3A-205ENST00000618553 Q5VV11 94 aa5.83□□□□□ -1.48
APOBEC3A-205ENST00000618553 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
APOBEC3A-205ENST00000618553 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
APOBEC3A-205ENST00000618553 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
APOBEC3A-205ENST00000618553 PSPHP1O15172 72 aa5.78□□□□□ -1.48
APOBEC3A-205ENST00000618553 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
APOBEC3A-205ENST00000618553 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
APOBEC3A-205ENST00000618553 UQCR11O14957 56 aa5.75□□□□□ -1.49
APOBEC3A-205ENST00000618553 A6NN06 94 aa5.73□□□□□ -1.49
APOBEC3A-205ENST00000618553 MT1BP07438 61 aa5.72□□□□□ -1.49
APOBEC3A-205ENST00000618553 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
APOBEC3A-205ENST00000618553 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
APOBEC3A-205ENST00000618553 NEBP20929 6669 aa5.66□□□□□ -1.5
APOBEC3A-205ENST00000618553 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
APOBEC3A-205ENST00000618553 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.63□□□□□ -1.51
APOBEC3A-205ENST00000618553 A6NED7 52 aa5.62□□□□□ -1.51
APOBEC3A-205ENST00000618553 A0A0D9SG42 100 aa5.61□□□□□ -1.51
APOBEC3A-205ENST00000618553 A8MU10 97 aa5.61□□□□□ -1.51
APOBEC3A-205ENST00000618553 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
APOBEC3A-205ENST00000618553 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
APOBEC3A-205ENST00000618553 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
APOBEC3A-205ENST00000618553 KRTAP5-11Q6L8G4 156 aa5.59□□□□□ -1.51
APOBEC3A-205ENST00000618553 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
APOBEC3A-205ENST00000618553 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
APOBEC3A-205ENST00000618553 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
APOBEC3A-205ENST00000618553 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
APOBEC3A-205ENST00000618553 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
APOBEC3A-205ENST00000618553 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
APOBEC3A-205ENST00000618553 MT1XP80297 61 aa5.48□□□□□ -1.53
APOBEC3A-205ENST00000618553 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
APOBEC3A-205ENST00000618553 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
APOBEC3A-205ENST00000618553 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
APOBEC3A-205ENST00000618553 K7ERS5 55 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms