RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 KRTAP4-1Q9BYQ7 146 aa10.6□□□□□ -0.71
SDHA-220ENST00000617470 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
SDHA-220ENST00000617470 MUC2Q02817 5179 aa10.58□□□□□ -0.72
SDHA-220ENST00000617470 LINC01558Q9Y6Z2 57 aa10.56□□□□□ -0.72
SDHA-220ENST00000617470 CHKB-CPT1BH3BT56 60 aa10.54□□□□□ -0.72
SDHA-220ENST00000617470 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
SDHA-220ENST00000617470 A6NED7 52 aa10.35□□□□□ -0.75
SDHA-220ENST00000617470 A8MU10 97 aa10.35□□□□□ -0.75
SDHA-220ENST00000617470 LCA10Q71F78 164 aa10.3□□□□□ -0.76
SDHA-220ENST00000617470 RBM12B-AS1Q9P1G2 102 aa10.28□□□□□ -0.76
SDHA-220ENST00000617470 CDC42SE1Q9NRR8 79 aa10.25□□□□□ -0.77
SDHA-220ENST00000617470 SPTSSBQ8NFR3 76 aa10.23□□□□□ -0.77
SDHA-220ENST00000617470 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
SDHA-220ENST00000617470 KRTAP3-3Q9BYR6 98 aa10.22□□□□□ -0.77
SDHA-220ENST00000617470 A0A1B0GU69 56 aa10.21□□□□□ -0.77
SDHA-220ENST00000617470 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
SDHA-220ENST00000617470 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
SDHA-220ENST00000617470 LCE2CQ5TA81 110 aa10.16□□□□□ -0.78
SDHA-220ENST00000617470 S4R3F8 94 aa10.14□□□□□ -0.79
SDHA-220ENST00000617470 PMAIP1Q13794 54 aa10.08□□□□□ -0.8
SDHA-220ENST00000617470 SEC61GP60059 68 aa10.03□□□□□ -0.8
SDHA-220ENST00000617470 MT1HP80294 61 aa10.02□□□□□ -0.81
SDHA-220ENST00000617470 UQCR11O14957 56 aa9.99□□□□□ -0.81
SDHA-220ENST00000617470 SPATA8Q6RVD6 105 aa9.99□□□□□ -0.81
SDHA-220ENST00000617470 FLGP20930 4061 aaPredicted RBP9.99□□□□□ -0.81
SDHA-220ENST00000617470 A6NN06 94 aa9.99□□□□□ -0.81
SDHA-220ENST00000617470 M0R2T5 61 aa9.97□□□□□ -0.81
SDHA-220ENST00000617470 MIR22HGQ0VDD5 57 aa9.94□□□□□ -0.82
SDHA-220ENST00000617470 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
SDHA-220ENST00000617470 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
SDHA-220ENST00000617470 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
SDHA-220ENST00000617470 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
SDHA-220ENST00000617470 A0A1B0GU33 70 aa9.86□□□□□ -0.83
SDHA-220ENST00000617470 KTN1-AS1Q86SY8 53 aa9.83□□□□□ -0.84
SDHA-220ENST00000617470 H0YAA0 97 aa9.81□□□□□ -0.84
SDHA-220ENST00000617470 P0C880 135 aa9.79□□□□□ -0.84
SDHA-220ENST00000617470 ADM2Q7Z4H4 148 aa9.75□□□□□ -0.85
SDHA-220ENST00000617470 KRTAP13-4Q3LI77 160 aa9.69□□□□□ -0.86
SDHA-220ENST00000617470 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
SDHA-220ENST00000617470 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
SDHA-220ENST00000617470 MT2AP02795 61 aa9.51□□□□□ -0.89
SDHA-220ENST00000617470 KRTAP10-10P60014 251 aa9.46□□□□□ -0.89
SDHA-220ENST00000617470 A0A0D9SG42 100 aa9.46□□□□□ -0.9
SDHA-220ENST00000617470 MT1FP04733 61 aa9.44□□□□□ -0.9
SDHA-220ENST00000617470 PRAC1Q96KF2 57 aa9.44□□□□□ -0.9
SDHA-220ENST00000617470 M0QZ58 72 aa9.44□□□□□ -0.9
SDHA-220ENST00000617470 K7ERS5 55 aa9.33□□□□□ -0.92
SDHA-220ENST00000617470 R4GN34 69 aa9.33□□□□□ -0.92
SDHA-220ENST00000617470 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
SDHA-220ENST00000617470 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
SDHA-220ENST00000617470 KRTAP9-3Q9BYQ3 159 aa9.23□□□□□ -0.93
SDHA-220ENST00000617470 LINC01554Q52M75 96 aa9.23□□□□□ -0.93
SDHA-220ENST00000617470 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
SDHA-220ENST00000617470 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
SDHA-220ENST00000617470 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
SDHA-220ENST00000617470 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
SDHA-220ENST00000617470 ROMO1P60602 79 aa9.1□□□□□ -0.95
SDHA-220ENST00000617470 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
SDHA-220ENST00000617470 LCE2BO14633 110 aa9.07□□□□□ -0.96
SDHA-220ENST00000617470 KRTAP25-1Q3LHN0 102 aa9.05□□□□□ -0.96
SDHA-220ENST00000617470 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
SDHA-220ENST00000617470 USH2AO75445 5202 aa8.95□□□□□ -0.98
SDHA-220ENST00000617470 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
SDHA-220ENST00000617470 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
SDHA-220ENST00000617470 MT1BP07438 61 aa8.81□□□□□ -1
SDHA-220ENST00000617470 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
SDHA-220ENST00000617470 CAMK2N1Q7Z7J9 78 aa8.76□□□□□ -1.01
SDHA-220ENST00000617470 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
SDHA-220ENST00000617470 SSPOA2VEC9 5147 aa8.74□□□□□ -1.01
SDHA-220ENST00000617470 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
SDHA-220ENST00000617470 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
SDHA-220ENST00000617470 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
SDHA-220ENST00000617470 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
SDHA-220ENST00000617470 FCGBPQ9Y6R7 5405 aaPredicted RBP8.45□□□□□ -1.06
SDHA-220ENST00000617470 PRO2289Q9P1D8 64 aa8.44□□□□□ -1.06
SDHA-220ENST00000617470 MT1XP80297 61 aa8.42□□□□□ -1.06
SDHA-220ENST00000617470 TNP1P09430 55 aa8.37□□□□□ -1.07
SDHA-220ENST00000617470 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
SDHA-220ENST00000617470 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
SDHA-220ENST00000617470 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
SDHA-220ENST00000617470 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
SDHA-220ENST00000617470 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
SDHA-220ENST00000617470 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.11
SDHA-220ENST00000617470 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
SDHA-220ENST00000617470 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
SDHA-220ENST00000617470 KMT2DO14686 5537 aa7.95□□□□□ -1.14
SDHA-220ENST00000617470 KRTAP4-8A0A0G2JLE6 195 aa7.9□□□□□ -1.14
SDHA-220ENST00000617470 KRTAP4-8Q9BYQ9 185 aa7.9□□□□□ -1.14
SDHA-220ENST00000617470 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.15
SDHA-220ENST00000617470 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.15
SDHA-220ENST00000617470 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
SDHA-220ENST00000617470 NDUFAF8A1L188 74 aa7.8□□□□□ -1.16
SDHA-220ENST00000617470 H3BS24 57 aa7.77□□□□□ -1.17
SDHA-220ENST00000617470 KRTAP6-3Q3LI67 103 aa7.76□□□□□ -1.17
SDHA-220ENST00000617470 KRTAP12-3P60328 96 aa7.71□□□□□ -1.18
SDHA-220ENST00000617470 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
SDHA-220ENST00000617470 KRTAP5-9P26371 169 aa7.66□□□□□ -1.18
SDHA-220ENST00000617470 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
SDHA-220ENST00000617470 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
SDHA-220ENST00000617470 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms