RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
NOP56-220ENST00000616692 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
NOP56-220ENST00000616692 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
NOP56-220ENST00000616692 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
NOP56-220ENST00000616692 SPRR1BP22528 89 aa8.62□□□□□ -1.03
NOP56-220ENST00000616692 PRLHP81277 87 aa8.61□□□□□ -1.03
NOP56-220ENST00000616692 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
NOP56-220ENST00000616692 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
NOP56-220ENST00000616692 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
NOP56-220ENST00000616692 A0A1B0GU33 70 aa8.55□□□□□ -1.04
NOP56-220ENST00000616692 A0A096LNI7 61 aa8.53□□□□□ -1.04
NOP56-220ENST00000616692 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
NOP56-220ENST00000616692 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
NOP56-220ENST00000616692 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
NOP56-220ENST00000616692 SPINK1P00995 79 aa8.45□□□□□ -1.06
NOP56-220ENST00000616692 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
NOP56-220ENST00000616692 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
NOP56-220ENST00000616692 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
NOP56-220ENST00000616692 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
NOP56-220ENST00000616692 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.07
NOP56-220ENST00000616692 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
NOP56-220ENST00000616692 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
NOP56-220ENST00000616692 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
NOP56-220ENST00000616692 TNXBP22105 4242 aa8.28□□□□□ -1.08
NOP56-220ENST00000616692 SPINK6Q6UWN8 80 aa8.26□□□□□ -1.09
NOP56-220ENST00000616692 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
NOP56-220ENST00000616692 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
NOP56-220ENST00000616692 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
NOP56-220ENST00000616692 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
NOP56-220ENST00000616692 LRP2P98164 4655 aa8.09□□□□□ -1.11
NOP56-220ENST00000616692 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
NOP56-220ENST00000616692 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
NOP56-220ENST00000616692 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
NOP56-220ENST00000616692 XP32Q5T750 250 aa7.94□□□□□ -1.14
NOP56-220ENST00000616692 A0A0D9SG42 100 aa7.93□□□□□ -1.14
NOP56-220ENST00000616692 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
NOP56-220ENST00000616692 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
NOP56-220ENST00000616692 S4R3F8 94 aa7.87□□□□□ -1.15
NOP56-220ENST00000616692 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
NOP56-220ENST00000616692 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
NOP56-220ENST00000616692 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
NOP56-220ENST00000616692 LPAP08519 4548 aa7.78□□□□□ -1.16
NOP56-220ENST00000616692 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
NOP56-220ENST00000616692 R4GN34 69 aa7.74□□□□□ -1.17
NOP56-220ENST00000616692 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
NOP56-220ENST00000616692 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
NOP56-220ENST00000616692 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
NOP56-220ENST00000616692 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.17
NOP56-220ENST00000616692 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
NOP56-220ENST00000616692 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
NOP56-220ENST00000616692 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
NOP56-220ENST00000616692 KRTAP12-1P59990 96 aa7.58□□□□□ -1.2
NOP56-220ENST00000616692 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
NOP56-220ENST00000616692 MUC2Q02817 5179 aa7.52□□□□□ -1.21
NOP56-220ENST00000616692 INE1O15225 51 aa7.5□□□□□ -1.21
NOP56-220ENST00000616692 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
NOP56-220ENST00000616692 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
NOP56-220ENST00000616692 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
NOP56-220ENST00000616692 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
NOP56-220ENST00000616692 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
NOP56-220ENST00000616692 SPRR5A0A1B0GTR4 108 aa7.25□□□□□ -1.25
NOP56-220ENST00000616692 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
NOP56-220ENST00000616692 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.25
NOP56-220ENST00000616692 MT1HP80294 61 aa7.19□□□□□ -1.26
NOP56-220ENST00000616692 M0QZ58 72 aa7.14□□□□□ -1.27
NOP56-220ENST00000616692 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
NOP56-220ENST00000616692 C9orf92A6NGG3 77 aa7.01□□□□□ -1.29
NOP56-220ENST00000616692 M0R2T5 61 aa6.98□□□□□ -1.29
NOP56-220ENST00000616692 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
NOP56-220ENST00000616692 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
NOP56-220ENST00000616692 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
NOP56-220ENST00000616692 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
NOP56-220ENST00000616692 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
NOP56-220ENST00000616692 USH2AO75445 5202 aa6.65□□□□□ -1.35
NOP56-220ENST00000616692 MT2AP02795 61 aa6.63□□□□□ -1.35
NOP56-220ENST00000616692 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
NOP56-220ENST00000616692 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
NOP56-220ENST00000616692 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
NOP56-220ENST00000616692 LCE2BO14633 110 aa6.55□□□□□ -1.36
NOP56-220ENST00000616692 MT1FP04733 61 aa6.54□□□□□ -1.36
NOP56-220ENST00000616692 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
NOP56-220ENST00000616692 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
NOP56-220ENST00000616692 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
NOP56-220ENST00000616692 TNP1P09430 55 aa6.43□□□□□ -1.38
NOP56-220ENST00000616692 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
NOP56-220ENST00000616692 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
NOP56-220ENST00000616692 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
NOP56-220ENST00000616692 NEBP20929 6669 aa6.12□□□□□ -1.43
NOP56-220ENST00000616692 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
NOP56-220ENST00000616692 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
NOP56-220ENST00000616692 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
NOP56-220ENST00000616692 MT1BP07438 61 aa5.94□□□□□ -1.46
NOP56-220ENST00000616692 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
NOP56-220ENST00000616692 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
NOP56-220ENST00000616692 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
NOP56-220ENST00000616692 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
NOP56-220ENST00000616692 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
NOP56-220ENST00000616692 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
NOP56-220ENST00000616692 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
NOP56-220ENST00000616692 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms