RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 Q8N1X5 172 aa5.57□□□□□ -1.52
GGA3-221ENST00000614198 HERC2O95714 4834 aa5.57□□□□□ -1.52
GGA3-221ENST00000614198 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
GGA3-221ENST00000614198 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
GGA3-221ENST00000614198 LPAP08519 4548 aa5.55□□□□□ -1.52
GGA3-221ENST00000614198 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
GGA3-221ENST00000614198 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
GGA3-221ENST00000614198 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
GGA3-221ENST00000614198 P0C880 135 aa5.5□□□□□ -1.53
GGA3-221ENST00000614198 C9orf92A6NGG3 77 aa5.49□□□□□ -1.53
GGA3-221ENST00000614198 A8MUU9 505 aa5.48□□□□□ -1.53
GGA3-221ENST00000614198 HERC1Q15751 4861 aa5.48□□□□□ -1.53
GGA3-221ENST00000614198 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
GGA3-221ENST00000614198 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
GGA3-221ENST00000614198 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
GGA3-221ENST00000614198 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
GGA3-221ENST00000614198 LRP2P98164 4655 aa5.44□□□□□ -1.54
GGA3-221ENST00000614198 H0YAA0 97 aa5.42□□□□□ -1.54
GGA3-221ENST00000614198 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
GGA3-221ENST00000614198 K7ERS5 55 aa5.39□□□□□ -1.55
GGA3-221ENST00000614198 A0A1B0GU33 70 aa5.38□□□□□ -1.55
GGA3-221ENST00000614198 MUC2Q02817 5179 aa5.37□□□□□ -1.55
GGA3-221ENST00000614198 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
GGA3-221ENST00000614198 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
GGA3-221ENST00000614198 A0A0D9SG42 100 aa5.29□□□□□ -1.56
GGA3-221ENST00000614198 C20orf166-AS1Q96NR2 134 aa5.29□□□□□ -1.56
GGA3-221ENST00000614198 J3QL48 77 aa5.28□□□□□ -1.56
GGA3-221ENST00000614198 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
GGA3-221ENST00000614198 XP32Q5T750 250 aa5.23□□□□□ -1.57
GGA3-221ENST00000614198 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
GGA3-221ENST00000614198 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
GGA3-221ENST00000614198 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
GGA3-221ENST00000614198 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
GGA3-221ENST00000614198 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
GGA3-221ENST00000614198 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
GGA3-221ENST00000614198 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
GGA3-221ENST00000614198 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
GGA3-221ENST00000614198 RPL37P61927 97 aaKnown RBP5.13□□□□□ -1.59
GGA3-221ENST00000614198 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
GGA3-221ENST00000614198 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
GGA3-221ENST00000614198 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
GGA3-221ENST00000614198 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
GGA3-221ENST00000614198 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
GGA3-221ENST00000614198 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
GGA3-221ENST00000614198 S4R3F8 94 aa4.95□□□□□ -1.62
GGA3-221ENST00000614198 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
GGA3-221ENST00000614198 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
GGA3-221ENST00000614198 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
GGA3-221ENST00000614198 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
GGA3-221ENST00000614198 KRTAP12-1P59990 96 aa4.84□□□□□ -1.64
GGA3-221ENST00000614198 KRTAP19-2Q3LHN2 52 aa4.83□□□□□ -1.64
GGA3-221ENST00000614198 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
GGA3-221ENST00000614198 M0QZ58 72 aa4.75□□□□□ -1.65
GGA3-221ENST00000614198 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
GGA3-221ENST00000614198 R4GN34 69 aa4.72□□□□□ -1.65
GGA3-221ENST00000614198 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
GGA3-221ENST00000614198 MT1HP80294 61 aa4.62□□□□□ -1.67
GGA3-221ENST00000614198 M0R2T5 61 aa4.6□□□□□ -1.67
GGA3-221ENST00000614198 CAMK2N1Q7Z7J9 78 aa4.6□□□□□ -1.67
GGA3-221ENST00000614198 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
GGA3-221ENST00000614198 USH2AO75445 5202 aa4.49□□□□□ -1.69
GGA3-221ENST00000614198 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
GGA3-221ENST00000614198 MT1FP04733 61 aa4.46□□□□□ -1.7
GGA3-221ENST00000614198 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
GGA3-221ENST00000614198 MT2AP02795 61 aa4.44□□□□□ -1.7
GGA3-221ENST00000614198 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
GGA3-221ENST00000614198 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
GGA3-221ENST00000614198 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
GGA3-221ENST00000614198 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
GGA3-221ENST00000614198 TNP1P09430 55 aa4.31□□□□□ -1.72
GGA3-221ENST00000614198 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
GGA3-221ENST00000614198 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
GGA3-221ENST00000614198 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
GGA3-221ENST00000614198 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
GGA3-221ENST00000614198 LCE2BO14633 110 aa4.23□□□□□ -1.73
GGA3-221ENST00000614198 KMT2DO14686 5537 aa4.18□□□□□ -1.74
GGA3-221ENST00000614198 MT1BP07438 61 aa4.18□□□□□ -1.74
GGA3-221ENST00000614198 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
GGA3-221ENST00000614198 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
GGA3-221ENST00000614198 INE1O15225 51 aa4.14□□□□□ -1.75
GGA3-221ENST00000614198 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
GGA3-221ENST00000614198 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
GGA3-221ENST00000614198 MT1XP80297 61 aa4.06□□□□□ -1.76
GGA3-221ENST00000614198 LCE3AQ5TA76 89 aa4□□□□□ -1.77
GGA3-221ENST00000614198 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
GGA3-221ENST00000614198 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
GGA3-221ENST00000614198 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
GGA3-221ENST00000614198 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
GGA3-221ENST00000614198 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
GGA3-221ENST00000614198 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
GGA3-221ENST00000614198 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
GGA3-221ENST00000614198 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
GGA3-221ENST00000614198 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
GGA3-221ENST00000614198 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
GGA3-221ENST00000614198 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
GGA3-221ENST00000614198 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
GGA3-221ENST00000614198 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
GGA3-221ENST00000614198 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
GGA3-221ENST00000614198 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
GGA3-221ENST00000614198 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms