RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MPLKIPQ8TAP9 179 aa5.84□□□□□ -1.47
SLIRP-212ENST00000613856 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SLIRP-212ENST00000613856 C4orf26Q17RF5 130 aa5.8□□□□□ -1.48
SLIRP-212ENST00000613856 COX6B2Q6YFQ2 88 aa5.79□□□□□ -1.48
SLIRP-212ENST00000613856 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
SLIRP-212ENST00000613856 TMEM258P61165 79 aa5.77□□□□□ -1.49
SLIRP-212ENST00000613856 A8MUN3 132 aa5.76□□□□□ -1.49
SLIRP-212ENST00000613856 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-212ENST00000613856 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
SLIRP-212ENST00000613856 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-212ENST00000613856 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
SLIRP-212ENST00000613856 FAM236DA0A1B0GTK5 79 aa5.73□□□□□ -1.49
SLIRP-212ENST00000613856 FAM236CP0DP71 79 aa5.73□□□□□ -1.49
SLIRP-212ENST00000613856 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
SLIRP-212ENST00000613856 M0R2T5 61 aa5.7□□□□□ -1.5
SLIRP-212ENST00000613856 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
SLIRP-212ENST00000613856 ACYP2P14621 99 aa5.68□□□□□ -1.5
SLIRP-212ENST00000613856 USH2AO75445 5202 aa5.66□□□□□ -1.5
SLIRP-212ENST00000613856 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
SLIRP-212ENST00000613856 COA5Q86WW8 74 aa5.62□□□□□ -1.51
SLIRP-212ENST00000613856 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
SLIRP-212ENST00000613856 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-212ENST00000613856 S4R3F8 94 aa5.61□□□□□ -1.51
SLIRP-212ENST00000613856 LCA10Q71F78 164 aa5.58□□□□□ -1.52
SLIRP-212ENST00000613856 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
SLIRP-212ENST00000613856 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
SLIRP-212ENST00000613856 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SLIRP-212ENST00000613856 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
SLIRP-212ENST00000613856 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
SLIRP-212ENST00000613856 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
SLIRP-212ENST00000613856 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
SLIRP-212ENST00000613856 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SLIRP-212ENST00000613856 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SLIRP-212ENST00000613856 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
SLIRP-212ENST00000613856 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
SLIRP-212ENST00000613856 MT2AP02795 61 aa5.43□□□□□ -1.54
SLIRP-212ENST00000613856 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
SLIRP-212ENST00000613856 H0YAA0 97 aa5.41□□□□□ -1.54
SLIRP-212ENST00000613856 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
SLIRP-212ENST00000613856 MT1FP04733 61 aa5.4□□□□□ -1.54
SLIRP-212ENST00000613856 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
SLIRP-212ENST00000613856 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SLIRP-212ENST00000613856 V9GYY9 64 aa5.36□□□□□ -1.55
SLIRP-212ENST00000613856 Q1T7F1 81 aa5.34□□□□□ -1.55
SLIRP-212ENST00000613856 SEC61GP60059 68 aa5.32□□□□□ -1.56
SLIRP-212ENST00000613856 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
SLIRP-212ENST00000613856 A0A1B0GU69 56 aa5.31□□□□□ -1.56
SLIRP-212ENST00000613856 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
SLIRP-212ENST00000613856 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
SLIRP-212ENST00000613856 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
SLIRP-212ENST00000613856 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
SLIRP-212ENST00000613856 P0C880 135 aa5.27□□□□□ -1.57
SLIRP-212ENST00000613856 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
SLIRP-212ENST00000613856 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
SLIRP-212ENST00000613856 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
SLIRP-212ENST00000613856 PSPHP1O15172 72 aa5.21□□□□□ -1.58
SLIRP-212ENST00000613856 Q5VV11 94 aa5.2□□□□□ -1.58
SLIRP-212ENST00000613856 A0A1B0GU33 70 aa5.19□□□□□ -1.58
SLIRP-212ENST00000613856 M0QZ58 72 aa5.16□□□□□ -1.58
SLIRP-212ENST00000613856 R4GN34 69 aa5.15□□□□□ -1.59
SLIRP-212ENST00000613856 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
SLIRP-212ENST00000613856 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
SLIRP-212ENST00000613856 NEBP20929 6669 aa5.13□□□□□ -1.59
SLIRP-212ENST00000613856 UQCR11O14957 56 aa5.13□□□□□ -1.59
SLIRP-212ENST00000613856 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
SLIRP-212ENST00000613856 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
SLIRP-212ENST00000613856 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
SLIRP-212ENST00000613856 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
SLIRP-212ENST00000613856 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
SLIRP-212ENST00000613856 A6NED7 52 aa5.07□□□□□ -1.6
SLIRP-212ENST00000613856 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
SLIRP-212ENST00000613856 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
SLIRP-212ENST00000613856 A6NN06 94 aa5.02□□□□□ -1.61
SLIRP-212ENST00000613856 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
SLIRP-212ENST00000613856 A0A0D9SG42 100 aa4.99□□□□□ -1.61
SLIRP-212ENST00000613856 A8MU10 97 aa4.99□□□□□ -1.61
SLIRP-212ENST00000613856 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
SLIRP-212ENST00000613856 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
SLIRP-212ENST00000613856 MT1BP07438 61 aa4.95□□□□□ -1.62
SLIRP-212ENST00000613856 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
SLIRP-212ENST00000613856 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
SLIRP-212ENST00000613856 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
SLIRP-212ENST00000613856 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
SLIRP-212ENST00000613856 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
SLIRP-212ENST00000613856 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
SLIRP-212ENST00000613856 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
SLIRP-212ENST00000613856 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
SLIRP-212ENST00000613856 KMT2DO14686 5537 aa4.87□□□□□ -1.63
SLIRP-212ENST00000613856 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
SLIRP-212ENST00000613856 K7ERS5 55 aa4.86□□□□□ -1.63
SLIRP-212ENST00000613856 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
SLIRP-212ENST00000613856 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
SLIRP-212ENST00000613856 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
SLIRP-212ENST00000613856 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
SLIRP-212ENST00000613856 H3BS24 57 aa4.78□□□□□ -1.64
SLIRP-212ENST00000613856 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
SLIRP-212ENST00000613856 MT1XP80297 61 aa4.76□□□□□ -1.65
SLIRP-212ENST00000613856 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SLIRP-212ENST00000613856 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
SLIRP-212ENST00000613856 SPRR2EP22531 72 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms