RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
CLTCL1-207ENST00000611723 MT1HP80294 61 aa7.85□□□□□ -1.15
CLTCL1-207ENST00000611723 PCP4P48539 62 aa7.83□□□□□ -1.16
CLTCL1-207ENST00000611723 ACYP2P14621 99 aa7.81□□□□□ -1.16
CLTCL1-207ENST00000611723 S4R3F8 94 aa7.78□□□□□ -1.16
CLTCL1-207ENST00000611723 LCA10Q71F78 164 aa7.74□□□□□ -1.17
CLTCL1-207ENST00000611723 TMEM258P61165 79 aa7.73□□□□□ -1.17
CLTCL1-207ENST00000611723 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
CLTCL1-207ENST00000611723 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-207ENST00000611723 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-207ENST00000611723 M0R2T5 61 aa7.71□□□□□ -1.18
CLTCL1-207ENST00000611723 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
CLTCL1-207ENST00000611723 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-207ENST00000611723 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
CLTCL1-207ENST00000611723 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
CLTCL1-207ENST00000611723 COA5Q86WW8 74 aa7.64□□□□□ -1.19
CLTCL1-207ENST00000611723 CHKB-CPT1BH3BT56 60 aa7.62□□□□□ -1.19
CLTCL1-207ENST00000611723 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
CLTCL1-207ENST00000611723 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
CLTCL1-207ENST00000611723 H0YAA0 97 aa7.5□□□□□ -1.21
CLTCL1-207ENST00000611723 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
CLTCL1-207ENST00000611723 MT2AP02795 61 aa7.47□□□□□ -1.21
CLTCL1-207ENST00000611723 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
CLTCL1-207ENST00000611723 MT1FP04733 61 aa7.41□□□□□ -1.22
CLTCL1-207ENST00000611723 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
CLTCL1-207ENST00000611723 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-207ENST00000611723 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
CLTCL1-207ENST00000611723 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
CLTCL1-207ENST00000611723 USH2AO75445 5202 aa7.38□□□□□ -1.23
CLTCL1-207ENST00000611723 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-207ENST00000611723 P0C880 135 aa7.31□□□□□ -1.24
CLTCL1-207ENST00000611723 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
CLTCL1-207ENST00000611723 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
CLTCL1-207ENST00000611723 LINC01558Q9Y6Z2 57 aa7.29□□□□□ -1.24
CLTCL1-207ENST00000611723 SEC61GP60059 68 aa7.28□□□□□ -1.24
CLTCL1-207ENST00000611723 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
CLTCL1-207ENST00000611723 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
CLTCL1-207ENST00000611723 A0A1B0GU69 56 aa7.23□□□□□ -1.25
CLTCL1-207ENST00000611723 Q1T7F1 81 aa7.21□□□□□ -1.26
CLTCL1-207ENST00000611723 V9GYY9 64 aa7.21□□□□□ -1.26
CLTCL1-207ENST00000611723 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
CLTCL1-207ENST00000611723 LCE2BO14633 110 aa7.19□□□□□ -1.26
CLTCL1-207ENST00000611723 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
CLTCL1-207ENST00000611723 M0QZ58 72 aa7.15□□□□□ -1.26
CLTCL1-207ENST00000611723 R4GN34 69 aa7.15□□□□□ -1.26
CLTCL1-207ENST00000611723 A0A1B0GU33 70 aa7.13□□□□□ -1.27
CLTCL1-207ENST00000611723 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-207ENST00000611723 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
CLTCL1-207ENST00000611723 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-207ENST00000611723 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
CLTCL1-207ENST00000611723 Q5VV11 94 aa7.05□□□□□ -1.28
CLTCL1-207ENST00000611723 PSPHP1O15172 72 aa7.03□□□□□ -1.28
CLTCL1-207ENST00000611723 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
CLTCL1-207ENST00000611723 UQCR11O14957 56 aa6.97□□□□□ -1.29
CLTCL1-207ENST00000611723 MT1BP07438 61 aa6.97□□□□□ -1.29
CLTCL1-207ENST00000611723 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.3
CLTCL1-207ENST00000611723 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
CLTCL1-207ENST00000611723 A6NN06 94 aa6.93□□□□□ -1.3
CLTCL1-207ENST00000611723 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
CLTCL1-207ENST00000611723 A0A0D9SG42 100 aa6.87□□□□□ -1.31
CLTCL1-207ENST00000611723 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
CLTCL1-207ENST00000611723 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
CLTCL1-207ENST00000611723 A8MU10 97 aa6.84□□□□□ -1.31
CLTCL1-207ENST00000611723 A6NED7 52 aa6.83□□□□□ -1.32
CLTCL1-207ENST00000611723 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
CLTCL1-207ENST00000611723 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
CLTCL1-207ENST00000611723 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
CLTCL1-207ENST00000611723 NEBP20929 6669 aa6.73□□□□□ -1.33
CLTCL1-207ENST00000611723 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
CLTCL1-207ENST00000611723 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
CLTCL1-207ENST00000611723 KRTAP20-1Q3LI63 56 aa6.68□□□□□ -1.34
CLTCL1-207ENST00000611723 MT1XP80297 61 aa6.67□□□□□ -1.34
CLTCL1-207ENST00000611723 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
CLTCL1-207ENST00000611723 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
CLTCL1-207ENST00000611723 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
CLTCL1-207ENST00000611723 K7ERS5 55 aa6.61□□□□□ -1.35
CLTCL1-207ENST00000611723 BRK1Q8WUW1 75 aa6.5□□□□□ -1.37
CLTCL1-207ENST00000611723 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
CLTCL1-207ENST00000611723 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
CLTCL1-207ENST00000611723 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
CLTCL1-207ENST00000611723 KMT2DO14686 5537 aa6.36□□□□□ -1.39
CLTCL1-207ENST00000611723 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
CLTCL1-207ENST00000611723 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
CLTCL1-207ENST00000611723 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
CLTCL1-207ENST00000611723 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
CLTCL1-207ENST00000611723 TNP1P09430 55 aa6.31□□□□□ -1.4
CLTCL1-207ENST00000611723 ROMO1P60602 79 aa6.29□□□□□ -1.4
CLTCL1-207ENST00000611723 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
CLTCL1-207ENST00000611723 PRO0628Q9UI54 55 aa6.24□□□□□ -1.41
CLTCL1-207ENST00000611723 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
CLTCL1-207ENST00000611723 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
CLTCL1-207ENST00000611723 PMAIP1Q13794 54 aa6.17□□□□□ -1.42
CLTCL1-207ENST00000611723 SPRR2EP22531 72 aa6.16□□□□□ -1.42
CLTCL1-207ENST00000611723 SPRR2BP35325 72 aa6.16□□□□□ -1.42
CLTCL1-207ENST00000611723 SPRR2AP35326 72 aa6.16□□□□□ -1.42
CLTCL1-207ENST00000611723 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
CLTCL1-207ENST00000611723 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
CLTCL1-207ENST00000611723 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
CLTCL1-207ENST00000611723 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
CLTCL1-207ENST00000611723 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms