RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
CDKN3-211ENST00000611205 KRTAP10-5P60370 271 aa10.87□□□□□ -0.67
CDKN3-211ENST00000611205 KRTAP20-1Q3LI63 56 aa10.86□□□□□ -0.67
CDKN3-211ENST00000611205 LINC00643Q86TS7 51 aa10.84□□□□□ -0.67
CDKN3-211ENST00000611205 KLKP1Q107X0 134 aa10.8□□□□□ -0.68
CDKN3-211ENST00000611205 ANAPC13Q9BS18 74 aa10.77□□□□□ -0.69
CDKN3-211ENST00000611205 KRTAP5-9P26371 169 aa10.75□□□□□ -0.69
CDKN3-211ENST00000611205 TP53AIP1Q9HCN2 124 aa10.71□□□□□ -0.69
CDKN3-211ENST00000611205 ATP5EP2Q5VTU8 51 aa10.7□□□□□ -0.7
CDKN3-211ENST00000611205 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
CDKN3-211ENST00000611205 KMT2DO14686 5537 aa10.61□□□□□ -0.71
CDKN3-211ENST00000611205 CRIPTQ9P021 101 aa10.59□□□□□ -0.71
CDKN3-211ENST00000611205 ATOX1O00244 68 aa10.58□□□□□ -0.72
CDKN3-211ENST00000611205 MDN1Q9NU22 5596 aa10.56□□□□□ -0.72
CDKN3-211ENST00000611205 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
CDKN3-211ENST00000611205 A0A087WVE0 104 aa10.54□□□□□ -0.72
CDKN3-211ENST00000611205 UQCRQO14949 82 aa10.5□□□□□ -0.73
CDKN3-211ENST00000611205 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
CDKN3-211ENST00000611205 CCDC179H3BU77 68 aa10.44□□□□□ -0.74
CDKN3-211ENST00000611205 KRTAP2-3P0C7H8 128 aa10.44□□□□□ -0.74
CDKN3-211ENST00000611205 COX7CP15954 63 aa10.44□□□□□ -0.74
CDKN3-211ENST00000611205 KRTAP2-4Q9BYR9 128 aa10.44□□□□□ -0.74
CDKN3-211ENST00000611205 TRAV22A0A0B4J277 110 aa10.43□□□□□ -0.74
CDKN3-211ENST00000611205 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
CDKN3-211ENST00000611205 SMIM20Q8N5G0 67 aa10.39□□□□□ -0.75
CDKN3-211ENST00000611205 SERP2Q8N6R1 65 aa10.39□□□□□ -0.75
CDKN3-211ENST00000611205 SPRR2FQ96RM1 72 aa10.39□□□□□ -0.75
CDKN3-211ENST00000611205 SPRR2EP22531 72 aa10.35□□□□□ -0.75
CDKN3-211ENST00000611205 SPRR2BP35325 72 aa10.35□□□□□ -0.75
CDKN3-211ENST00000611205 SPRR2AP35326 72 aa10.35□□□□□ -0.75
CDKN3-211ENST00000611205 NDUFC1O43677 76 aa10.34□□□□□ -0.75
CDKN3-211ENST00000611205 H0YAA0 97 aa10.32□□□□□ -0.76
CDKN3-211ENST00000611205 PRO2289Q9P1D8 64 aa10.31□□□□□ -0.76
CDKN3-211ENST00000611205 A8MUN3 132 aa10.29□□□□□ -0.76
CDKN3-211ENST00000611205 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
CDKN3-211ENST00000611205 TRAV7A0A075B6U4 112 aa10.24□□□□□ -0.77
CDKN3-211ENST00000611205 H0Y9P7 68 aa10.24□□□□□ -0.77
CDKN3-211ENST00000611205 TMEM258P61165 79 aa10.24□□□□□ -0.77
CDKN3-211ENST00000611205 MT1XP80297 61 aa10.24□□□□□ -0.77
CDKN3-211ENST00000611205 KRTAP8-1Q8IUC2 63 aa10.21□□□□□ -0.77
CDKN3-211ENST00000611205 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
CDKN3-211ENST00000611205 RPS28P62857 69 aaKnown RBP10.13□□□□□ -0.79
CDKN3-211ENST00000611205 LCE1AQ5T7P2 110 aa10.11□□□□□ -0.79
CDKN3-211ENST00000611205 KRTAP2-2Q9BYT5 123 aa10.09□□□□□ -0.79
CDKN3-211ENST00000611205 KRTAP2-1Q9BYU5 128 aa10.09□□□□□ -0.79
CDKN3-211ENST00000611205 KRTAP12-2P59991 146 aa10.06□□□□□ -0.8
CDKN3-211ENST00000611205 LINC00208Q96KT6 92 aa10.06□□□□□ -0.8
CDKN3-211ENST00000611205 ATP5EP56381 51 aaPredicted RBP10.05□□□□□ -0.8
CDKN3-211ENST00000611205 R4GN34 69 aa10.05□□□□□ -0.8
CDKN3-211ENST00000611205 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
CDKN3-211ENST00000611205 SPRR2DP22532 72 aa10.01□□□□□ -0.81
CDKN3-211ENST00000611205 MP68P56378 58 aa10.01□□□□□ -0.81
CDKN3-211ENST00000611205 OCR1Q9BZK8 76 aa10.01□□□□□ -0.81
CDKN3-211ENST00000611205 KRTAP4-8A0A0G2JLE6 195 aa9.97□□□□□ -0.81
CDKN3-211ENST00000611205 KRTAP4-8Q9BYQ9 185 aa9.97□□□□□ -0.81
CDKN3-211ENST00000611205 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
CDKN3-211ENST00000611205 H7BZZ5 65 aa9.96□□□□□ -0.82
CDKN3-211ENST00000611205 P0C880 135 aa9.96□□□□□ -0.82
CDKN3-211ENST00000611205 M0QZ58 72 aa9.95□□□□□ -0.82
CDKN3-211ENST00000611205 SERP1Q9Y6X1 66 aa9.9□□□□□ -0.82
CDKN3-211ENST00000611205 H3BPC8 53 aa9.87□□□□□ -0.83
CDKN3-211ENST00000611205 LINC01554Q52M75 96 aa9.87□□□□□ -0.83
CDKN3-211ENST00000611205 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
CDKN3-211ENST00000611205 KRTAP10-7P60409 375 aaPredicted RBP9.79□□□□□ -0.84
CDKN3-211ENST00000611205 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
CDKN3-211ENST00000611205 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
CDKN3-211ENST00000611205 LCE3BQ5TA77 95 aa9.76□□□□□ -0.85
CDKN3-211ENST00000611205 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
CDKN3-211ENST00000611205 SMIM26A0A096LP01 95 aa9.72□□□□□ -0.85
CDKN3-211ENST00000611205 KRTAP10-12P60413 245 aa9.71□□□□□ -0.86
CDKN3-211ENST00000611205 SPANXA2-OT1Q8N9U9 137 aa9.61□□□□□ -0.87
CDKN3-211ENST00000611205 ACYP2P14621 99 aa9.53□□□□□ -0.88
CDKN3-211ENST00000611205 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
CDKN3-211ENST00000611205 V9GYY9 64 aa9.43□□□□□ -0.9
CDKN3-211ENST00000611205 Q1T7F1 81 aa9.39□□□□□ -0.91
CDKN3-211ENST00000611205 CHKB-CPT1BH3BT56 60 aa9.32□□□□□ -0.92
CDKN3-211ENST00000611205 DSTQ03001 7570 aaKnown RBP9.29□□□□□ -0.92
CDKN3-211ENST00000611205 PRO0628Q9UI54 55 aa9.28□□□□□ -0.92
CDKN3-211ENST00000611205 GPR98Q8WXG9 6306 aa9.26□□□□□ -0.93
CDKN3-211ENST00000611205 COA5Q86WW8 74 aa9.21□□□□□ -0.94
CDKN3-211ENST00000611205 KRTAP4-9Q9BYQ8 210 aa9.21□□□□□ -0.94
CDKN3-211ENST00000611205 LCE5AQ5TCM9 118 aa9.19□□□□□ -0.94
CDKN3-211ENST00000611205 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
CDKN3-211ENST00000611205 KRTAP19-7Q3SYF9 63 aa9.16□□□□□ -0.94
CDKN3-211ENST00000611205 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
CDKN3-211ENST00000611205 KRTAP19-3Q7Z4W3 81 aa9.12□□□□□ -0.95
CDKN3-211ENST00000611205 MT1EP04732 61 aa9.11□□□□□ -0.95
CDKN3-211ENST00000611205 BRK1Q8WUW1 75 aa9.11□□□□□ -0.95
CDKN3-211ENST00000611205 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
CDKN3-211ENST00000611205 PSPHP1O15172 72 aa9.03□□□□□ -0.96
CDKN3-211ENST00000611205 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
CDKN3-211ENST00000611205 LCE1DQ5T752 114 aa8.92□□□□□ -0.98
CDKN3-211ENST00000611205 A0A0D9SG42 100 aa8.88□□□□□ -0.99
CDKN3-211ENST00000611205 A6NED7 52 aa8.86□□□□□ -0.99
CDKN3-211ENST00000611205 MT1GP13640 62 aa8.85□□□□□ -0.99
CDKN3-211ENST00000611205 SEC61GP60059 68 aa8.84□□□□□ -0.99
CDKN3-211ENST00000611205 KRTAP19-5Q3LI72 72 aa8.84□□□□□ -0.99
CDKN3-211ENST00000611205 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
CDKN3-211ENST00000611205 MT4P47944 62 aa8.8□□□□□ -1
CDKN3-211ENST00000611205 PP632Q6XCG6 107 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms