RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 A0A087WTM6 91 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 ROMO1P60602 79 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 LINC01556Q5JQF7 62 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 Q5VSD8 79 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 CSAG1Q6PB30 78 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
SSX9-202ENST00000608568 C8orf17Q9NRJ1 99 aa3.06□□□□□ -1.92
SSX9-202ENST00000608568 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
SSX9-202ENST00000608568 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
SSX9-202ENST00000608568 LRP2P98164 4655 aa3.05□□□□□ -1.92
SSX9-202ENST00000608568 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
SSX9-202ENST00000608568 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
SSX9-202ENST00000608568 ZNF861PO60384 105 aa3.03□□□□□ -1.92
SSX9-202ENST00000608568 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
SSX9-202ENST00000608568 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
SSX9-202ENST00000608568 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
SSX9-202ENST00000608568 IGLV7-43P04211 117 aa3□□□□□ -1.93
SSX9-202ENST00000608568 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
SSX9-202ENST00000608568 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
SSX9-202ENST00000608568 Q6ZSA8 131 aa3□□□□□ -1.93
SSX9-202ENST00000608568 Q96NJ1 140 aa3□□□□□ -1.93
SSX9-202ENST00000608568 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
SSX9-202ENST00000608568 A8MUU9 505 aa2.97□□□□□ -1.93
SSX9-202ENST00000608568 LPAP08519 4548 aa2.96□□□□□ -1.93
SSX9-202ENST00000608568 PANO1I0J062 215 aa2.96□□□□□ -1.94
SSX9-202ENST00000608568 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
SSX9-202ENST00000608568 PRLHP81277 87 aa2.95□□□□□ -1.94
SSX9-202ENST00000608568 LINC00483Q53H64 154 aa2.95□□□□□ -1.94
SSX9-202ENST00000608568 CIRBP-AS1Q8TBR5 109 aa2.95□□□□□ -1.94
SSX9-202ENST00000608568 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
SSX9-202ENST00000608568 A0A0G2JQZ4 141 aa2.94□□□□□ -1.94
SSX9-202ENST00000608568 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
SSX9-202ENST00000608568 K7ERS5 55 aa2.94□□□□□ -1.94
SSX9-202ENST00000608568 C14orf177Q52M58 125 aa2.94□□□□□ -1.94
SSX9-202ENST00000608568 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
SSX9-202ENST00000608568 CHTF8P0CG12 524 aa2.92□□□□□ -1.94
SSX9-202ENST00000608568 MT1HL1P0DM35 61 aa2.92□□□□□ -1.94
SSX9-202ENST00000608568 KRTAP13-1Q8IUC0 172 aa2.92□□□□□ -1.94
SSX9-202ENST00000608568 Q5W150 140 aa2.91□□□□□ -1.94
SSX9-202ENST00000608568 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.95
SSX9-202ENST00000608568 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
SSX9-202ENST00000608568 A0A096LNI7 61 aa2.89□□□□□ -1.95
SSX9-202ENST00000608568 KRTAP16-1A8MUX0 517 aa2.88□□□□□ -1.95
SSX9-202ENST00000608568 P0C880 135 aa2.88□□□□□ -1.95
SSX9-202ENST00000608568 SPACA4Q8TDM5 124 aa2.88□□□□□ -1.95
SSX9-202ENST00000608568 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
SSX9-202ENST00000608568 C20orf166-AS1Q96NR2 134 aa2.86□□□□□ -1.95
SSX9-202ENST00000608568 A0A1B0GU33 70 aa2.85□□□□□ -1.95
SSX9-202ENST00000608568 COX6B2Q6YFQ2 88 aa2.85□□□□□ -1.95
SSX9-202ENST00000608568 SSBP3-AS1Q7Z2R9 100 aa2.85□□□□□ -1.95
SSX9-202ENST00000608568 H0YAA0 97 aa2.84□□□□□ -1.95
SSX9-202ENST00000608568 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
SSX9-202ENST00000608568 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
SSX9-202ENST00000608568 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
SSX9-202ENST00000608568 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
SSX9-202ENST00000608568 PSORS1C2Q9UIG4 136 aa2.8□□□□□ -1.96
SSX9-202ENST00000608568 MUC2Q02817 5179 aa2.8□□□□□ -1.96
SSX9-202ENST00000608568 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
SSX9-202ENST00000608568 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
SSX9-202ENST00000608568 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
SSX9-202ENST00000608568 RPL37P61927 97 aaKnown RBP2.76□□□□□ -1.97
SSX9-202ENST00000608568 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
SSX9-202ENST00000608568 CRIPTQ9P021 101 aa2.75□□□□□ -1.97
SSX9-202ENST00000608568 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
SSX9-202ENST00000608568 SPINK1P00995 79 aa2.73□□□□□ -1.97
SSX9-202ENST00000608568 TYMSOSQ8TAI1 123 aa2.71□□□□□ -1.98
SSX9-202ENST00000608568 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
SSX9-202ENST00000608568 TPRXLQ17RH7 258 aa2.7□□□□□ -1.98
SSX9-202ENST00000608568 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
SSX9-202ENST00000608568 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
SSX9-202ENST00000608568 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
SSX9-202ENST00000608568 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
SSX9-202ENST00000608568 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
SSX9-202ENST00000608568 S4R3F8 94 aa2.6□□□□□ -1.99
SSX9-202ENST00000608568 KRTAP10-6P60371 365 aaPredicted RBP2.59□□□□□ -1.99
SSX9-202ENST00000608568 PLAC4Q8WY50 150 aa2.58□□□□□ -2
SSX9-202ENST00000608568 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
SSX9-202ENST00000608568 M0QZ58 72 aa2.56□□□□□ -2
SSX9-202ENST00000608568 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
SSX9-202ENST00000608568 PP632Q6XCG6 107 aa2.54□□□□□ -2
SSX9-202ENST00000608568 A0A0D9SG42 100 aa2.53□□□□□ -2
SSX9-202ENST00000608568 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
SSX9-202ENST00000608568 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
SSX9-202ENST00000608568 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
SSX9-202ENST00000608568 FSIP2Q5CZC0 6907 aa2.5□□□□□ -2.01
SSX9-202ENST00000608568 MT1HP80294 61 aa2.48□□□□□ -2.01
SSX9-202ENST00000608568 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
SSX9-202ENST00000608568 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
SSX9-202ENST00000608568 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
SSX9-202ENST00000608568 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
SSX9-202ENST00000608568 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
SSX9-202ENST00000608568 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
SSX9-202ENST00000608568 INE1O15225 51 aa2.44□□□□□ -2.02
SSX9-202ENST00000608568 MT3P25713 68 aa2.44□□□□□ -2.02
SSX9-202ENST00000608568 USH2AO75445 5202 aa2.43□□□□□ -2.02
SSX9-202ENST00000608568 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
SSX9-202ENST00000608568 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
SSX9-202ENST00000608568 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
SSX9-202ENST00000608568 M0R2T5 61 aa2.34□□□□□ -2.03
SSX9-202ENST00000608568 R4GN34 69 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms