RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 PMAIP1Q13794 54 aa7.9□□□□□ -1.14
AC009961.1-203ENST00000607836 HERC2O95714 4834 aa7.87□□□□□ -1.15
AC009961.1-203ENST00000607836 UQCR11O14957 56 aa7.81□□□□□ -1.16
AC009961.1-203ENST00000607836 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
AC009961.1-203ENST00000607836 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
AC009961.1-203ENST00000607836 J3QL48 77 aa7.76□□□□□ -1.17
AC009961.1-203ENST00000607836 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
AC009961.1-203ENST00000607836 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
AC009961.1-203ENST00000607836 A6NN06 94 aa7.73□□□□□ -1.17
AC009961.1-203ENST00000607836 S4R3F8 94 aa7.7□□□□□ -1.18
AC009961.1-203ENST00000607836 H0YAA0 97 aa7.69□□□□□ -1.18
AC009961.1-203ENST00000607836 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
AC009961.1-203ENST00000607836 A0A1B0GU33 70 aa7.68□□□□□ -1.18
AC009961.1-203ENST00000607836 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
AC009961.1-203ENST00000607836 MUC2Q02817 5179 aa7.63□□□□□ -1.19
AC009961.1-203ENST00000607836 HERC1Q15751 4861 aa7.61□□□□□ -1.19
AC009961.1-203ENST00000607836 PCLOQ9Y6V0 5065 aa7.6□□□□□ -1.19
AC009961.1-203ENST00000607836 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
AC009961.1-203ENST00000607836 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
AC009961.1-203ENST00000607836 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
AC009961.1-203ENST00000607836 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
AC009961.1-203ENST00000607836 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
AC009961.1-203ENST00000607836 P0C880 135 aa7.55□□□□□ -1.2
AC009961.1-203ENST00000607836 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
AC009961.1-203ENST00000607836 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
AC009961.1-203ENST00000607836 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
AC009961.1-203ENST00000607836 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
AC009961.1-203ENST00000607836 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
AC009961.1-203ENST00000607836 A0A0D9SG42 100 aa7.5□□□□□ -1.21
AC009961.1-203ENST00000607836 H3BS24 57 aa7.5□□□□□ -1.21
AC009961.1-203ENST00000607836 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
AC009961.1-203ENST00000607836 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
AC009961.1-203ENST00000607836 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
AC009961.1-203ENST00000607836 K7ERS5 55 aa7.28□□□□□ -1.24
AC009961.1-203ENST00000607836 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
AC009961.1-203ENST00000607836 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
AC009961.1-203ENST00000607836 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
AC009961.1-203ENST00000607836 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
AC009961.1-203ENST00000607836 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
AC009961.1-203ENST00000607836 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
AC009961.1-203ENST00000607836 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
AC009961.1-203ENST00000607836 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
AC009961.1-203ENST00000607836 M0QZ58 72 aa7.2□□□□□ -1.26
AC009961.1-203ENST00000607836 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
AC009961.1-203ENST00000607836 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
AC009961.1-203ENST00000607836 R4GN34 69 aa7.16□□□□□ -1.26
AC009961.1-203ENST00000607836 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
AC009961.1-203ENST00000607836 ROMO1P60602 79 aa7.1□□□□□ -1.27
AC009961.1-203ENST00000607836 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
AC009961.1-203ENST00000607836 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
AC009961.1-203ENST00000607836 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
AC009961.1-203ENST00000607836 M0R2T5 61 aa6.91□□□□□ -1.3
AC009961.1-203ENST00000607836 MT1HP80294 61 aa6.85□□□□□ -1.31
AC009961.1-203ENST00000607836 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
AC009961.1-203ENST00000607836 MT1FP04733 61 aa6.69□□□□□ -1.34
AC009961.1-203ENST00000607836 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
AC009961.1-203ENST00000607836 MT2AP02795 61 aa6.67□□□□□ -1.34
AC009961.1-203ENST00000607836 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
AC009961.1-203ENST00000607836 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
AC009961.1-203ENST00000607836 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
AC009961.1-203ENST00000607836 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
AC009961.1-203ENST00000607836 TNP1P09430 55 aa6.41□□□□□ -1.38
AC009961.1-203ENST00000607836 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
AC009961.1-203ENST00000607836 MT1BP07438 61 aa6.36□□□□□ -1.39
AC009961.1-203ENST00000607836 USH2AO75445 5202 aa6.35□□□□□ -1.39
AC009961.1-203ENST00000607836 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
AC009961.1-203ENST00000607836 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
AC009961.1-203ENST00000607836 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
AC009961.1-203ENST00000607836 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
AC009961.1-203ENST00000607836 MT1XP80297 61 aa6.25□□□□□ -1.41
AC009961.1-203ENST00000607836 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
AC009961.1-203ENST00000607836 LCE2BO14633 110 aa6.21□□□□□ -1.42
AC009961.1-203ENST00000607836 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
AC009961.1-203ENST00000607836 NDUFAF8A1L188 74 aa6.15□□□□□ -1.43
AC009961.1-203ENST00000607836 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
AC009961.1-203ENST00000607836 KMT2DO14686 5537 aa6.09□□□□□ -1.44
AC009961.1-203ENST00000607836 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
AC009961.1-203ENST00000607836 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
AC009961.1-203ENST00000607836 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
AC009961.1-203ENST00000607836 LUZP6Q538Z0 58 aa5.98□□□□□ -1.45
AC009961.1-203ENST00000607836 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
AC009961.1-203ENST00000607836 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
AC009961.1-203ENST00000607836 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
AC009961.1-203ENST00000607836 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
AC009961.1-203ENST00000607836 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
AC009961.1-203ENST00000607836 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
AC009961.1-203ENST00000607836 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
AC009961.1-203ENST00000607836 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
AC009961.1-203ENST00000607836 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
AC009961.1-203ENST00000607836 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
AC009961.1-203ENST00000607836 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
AC009961.1-203ENST00000607836 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
AC009961.1-203ENST00000607836 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
AC009961.1-203ENST00000607836 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
AC009961.1-203ENST00000607836 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
AC009961.1-203ENST00000607836 MT1EP04732 61 aa5.41□□□□□ -1.54
AC009961.1-203ENST00000607836 MT1LQ93083 61 aa5.37□□□□□ -1.55
AC009961.1-203ENST00000607836 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
AC009961.1-203ENST00000607836 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
AC009961.1-203ENST00000607836 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms