RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
AC009961.1-203ENST00000607836 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
AC009961.1-203ENST00000607836 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
AC009961.1-203ENST00000607836 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
AC009961.1-203ENST00000607836 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
AC009961.1-203ENST00000607836 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
AC009961.1-203ENST00000607836 DCAF1Q9Y4B6 1507 aa26.91■■□□□ 1.9
AC009961.1-203ENST00000607836 ABCC9O60706 1549 aa26.79■■□□□ 1.88
AC009961.1-203ENST00000607836 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
AC009961.1-203ENST00000607836 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
AC009961.1-203ENST00000607836 NACADO15069 1562 aa26.19■■□□□ 1.78
AC009961.1-203ENST00000607836 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
AC009961.1-203ENST00000607836 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
AC009961.1-203ENST00000607836 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
AC009961.1-203ENST00000607836 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
AC009961.1-203ENST00000607836 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
AC009961.1-203ENST00000607836 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
AC009961.1-203ENST00000607836 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
AC009961.1-203ENST00000607836 WIZO95785 1651 aa25.51■■□□□ 1.67
AC009961.1-203ENST00000607836 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
AC009961.1-203ENST00000607836 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.65
AC009961.1-203ENST00000607836 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
AC009961.1-203ENST00000607836 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
AC009961.1-203ENST00000607836 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
AC009961.1-203ENST00000607836 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
AC009961.1-203ENST00000607836 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
AC009961.1-203ENST00000607836 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
AC009961.1-203ENST00000607836 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
AC009961.1-203ENST00000607836 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
AC009961.1-203ENST00000607836 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
AC009961.1-203ENST00000607836 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
AC009961.1-203ENST00000607836 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
AC009961.1-203ENST00000607836 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
AC009961.1-203ENST00000607836 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
AC009961.1-203ENST00000607836 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
AC009961.1-203ENST00000607836 SOGA1O94964 1423 aa24.46■■□□□ 1.51
AC009961.1-203ENST00000607836 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
AC009961.1-203ENST00000607836 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
AC009961.1-203ENST00000607836 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
AC009961.1-203ENST00000607836 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
AC009961.1-203ENST00000607836 HRCP23327 699 aa24.31■■□□□ 1.48
AC009961.1-203ENST00000607836 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
AC009961.1-203ENST00000607836 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
AC009961.1-203ENST00000607836 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
AC009961.1-203ENST00000607836 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.46
AC009961.1-203ENST00000607836 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
AC009961.1-203ENST00000607836 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
AC009961.1-203ENST00000607836 EEA1Q15075 1411 aa24.05■■□□□ 1.44
AC009961.1-203ENST00000607836 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
AC009961.1-203ENST00000607836 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
AC009961.1-203ENST00000607836 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
AC009961.1-203ENST00000607836 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
AC009961.1-203ENST00000607836 CFTRP13569 1480 aa23.96■■□□□ 1.43
AC009961.1-203ENST00000607836 TOP2BQ02880 1626 aa23.96■■□□□ 1.43
AC009961.1-203ENST00000607836 GOLGA3Q08378 1498 aa23.95■■□□□ 1.43
AC009961.1-203ENST00000607836 CUX1P39880 1505 aa23.91■■□□□ 1.42
AC009961.1-203ENST00000607836 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
AC009961.1-203ENST00000607836 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
AC009961.1-203ENST00000607836 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
AC009961.1-203ENST00000607836 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
AC009961.1-203ENST00000607836 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
AC009961.1-203ENST00000607836 KIF21BO75037 1637 aa23.78■■□□□ 1.4
AC009961.1-203ENST00000607836 CLIP1P30622 1438 aa23.71■■□□□ 1.39
AC009961.1-203ENST00000607836 NESP48681 1621 aa23.71■■□□□ 1.39
AC009961.1-203ENST00000607836 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
AC009961.1-203ENST00000607836 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
AC009961.1-203ENST00000607836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
AC009961.1-203ENST00000607836 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
AC009961.1-203ENST00000607836 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
AC009961.1-203ENST00000607836 CUX2O14529 1486 aa23.6■■□□□ 1.37
AC009961.1-203ENST00000607836 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
AC009961.1-203ENST00000607836 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
AC009961.1-203ENST00000607836 ERICH3Q5RHP9 1530 aa23.48■■□□□ 1.35
AC009961.1-203ENST00000607836 IGF1RP08069 1367 aa23.48■■□□□ 1.35
AC009961.1-203ENST00000607836 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
AC009961.1-203ENST00000607836 APLP2Q06481 763 aa23.47■■□□□ 1.35
AC009961.1-203ENST00000607836 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
AC009961.1-203ENST00000607836 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
AC009961.1-203ENST00000607836 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
AC009961.1-203ENST00000607836 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
AC009961.1-203ENST00000607836 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
AC009961.1-203ENST00000607836 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
AC009961.1-203ENST00000607836 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
AC009961.1-203ENST00000607836 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
AC009961.1-203ENST00000607836 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
AC009961.1-203ENST00000607836 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
AC009961.1-203ENST00000607836 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
AC009961.1-203ENST00000607836 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
AC009961.1-203ENST00000607836 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
AC009961.1-203ENST00000607836 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
AC009961.1-203ENST00000607836 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
AC009961.1-203ENST00000607836 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
AC009961.1-203ENST00000607836 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
AC009961.1-203ENST00000607836 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
AC009961.1-203ENST00000607836 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
AC009961.1-203ENST00000607836 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
AC009961.1-203ENST00000607836 ITGAEP38570 1179 aa23.03■■□□□ 1.28
AC009961.1-203ENST00000607836 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
AC009961.1-203ENST00000607836 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
AC009961.1-203ENST00000607836 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms