RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
CCDC12-210ENST00000604181 A0A1W2PPM0 123 aa7.04□□□□□ -1.28
CCDC12-210ENST00000604181 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
CCDC12-210ENST00000604181 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
CCDC12-210ENST00000604181 TP53AIP1Q9HCN2 124 aa7□□□□□ -1.29
CCDC12-210ENST00000604181 SPRR2DP22532 72 aa6.99□□□□□ -1.29
CCDC12-210ENST00000604181 UBL5Q9BZL1 73 aa6.99□□□□□ -1.29
CCDC12-210ENST00000604181 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
CCDC12-210ENST00000604181 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
CCDC12-210ENST00000604181 H0YAA0 97 aa6.97□□□□□ -1.29
CCDC12-210ENST00000604181 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
CCDC12-210ENST00000604181 K7EP34 96 aa6.95□□□□□ -1.3
CCDC12-210ENST00000604181 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
CCDC12-210ENST00000604181 A8MUN3 132 aa6.94□□□□□ -1.3
CCDC12-210ENST00000604181 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
CCDC12-210ENST00000604181 NDUFC1O43677 76 aa6.89□□□□□ -1.31
CCDC12-210ENST00000604181 SPCS1Q9Y6A9 102 aa6.89□□□□□ -1.31
CCDC12-210ENST00000604181 SMIM6P0DI80 62 aa6.88□□□□□ -1.31
CCDC12-210ENST00000604181 PRO0461Q9UI25 63 aa6.88□□□□□ -1.31
CCDC12-210ENST00000604181 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
CCDC12-210ENST00000604181 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
CCDC12-210ENST00000604181 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
CCDC12-210ENST00000604181 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
CCDC12-210ENST00000604181 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
CCDC12-210ENST00000604181 P0C880 135 aa6.77□□□□□ -1.33
CCDC12-210ENST00000604181 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
CCDC12-210ENST00000604181 R4GN34 69 aa6.73□□□□□ -1.33
CCDC12-210ENST00000604181 ACYP1P07311 99 aa6.71□□□□□ -1.34
CCDC12-210ENST00000604181 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
CCDC12-210ENST00000604181 H0Y9P7 68 aa6.7□□□□□ -1.34
CCDC12-210ENST00000604181 M0QZ58 72 aa6.69□□□□□ -1.34
CCDC12-210ENST00000604181 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
CCDC12-210ENST00000604181 UQCRQO14949 82 aa6.65□□□□□ -1.34
CCDC12-210ENST00000604181 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
CCDC12-210ENST00000604181 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
CCDC12-210ENST00000604181 ATOX1O00244 68 aa6.62□□□□□ -1.35
CCDC12-210ENST00000604181 ETDBQ3ZM63 59 aa6.61□□□□□ -1.35
CCDC12-210ENST00000604181 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
CCDC12-210ENST00000604181 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
CCDC12-210ENST00000604181 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
CCDC12-210ENST00000604181 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
CCDC12-210ENST00000604181 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
CCDC12-210ENST00000604181 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
CCDC12-210ENST00000604181 F8W1H4 67 aa6.51□□□□□ -1.37
CCDC12-210ENST00000604181 GTF2H5Q6ZYL4 71 aa6.47□□□□□ -1.37
CCDC12-210ENST00000604181 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
CCDC12-210ENST00000604181 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
CCDC12-210ENST00000604181 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
CCDC12-210ENST00000604181 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
CCDC12-210ENST00000604181 MP68P56378 58 aa6.38□□□□□ -1.39
CCDC12-210ENST00000604181 FAM240AA0A1B0GVK7 77 aa6.37□□□□□ -1.39
CCDC12-210ENST00000604181 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
CCDC12-210ENST00000604181 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
CCDC12-210ENST00000604181 MT1EP04732 61 aa6.32□□□□□ -1.4
CCDC12-210ENST00000604181 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
CCDC12-210ENST00000604181 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
CCDC12-210ENST00000604181 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
CCDC12-210ENST00000604181 LINC00643Q86TS7 51 aa6.27□□□□□ -1.41
CCDC12-210ENST00000604181 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
CCDC12-210ENST00000604181 H3BPC8 53 aa6.23□□□□□ -1.41
CCDC12-210ENST00000604181 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
CCDC12-210ENST00000604181 MT4P47944 62 aa6.18□□□□□ -1.42
CCDC12-210ENST00000604181 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
CCDC12-210ENST00000604181 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
CCDC12-210ENST00000604181 PCP4L1A6NKN8 68 aa6.13□□□□□ -1.43
CCDC12-210ENST00000604181 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
CCDC12-210ENST00000604181 ACYP2P14621 99 aa6.12□□□□□ -1.43
CCDC12-210ENST00000604181 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
CCDC12-210ENST00000604181 MT1GP13640 62 aa6.09□□□□□ -1.43
CCDC12-210ENST00000604181 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
CCDC12-210ENST00000604181 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
CCDC12-210ENST00000604181 SPTSSBQ8NFR3 76 aa6.07□□□□□ -1.44
CCDC12-210ENST00000604181 MT1MQ8N339 61 aa6.04□□□□□ -1.44
CCDC12-210ENST00000604181 SCGB1A1P11684 91 aa6.02□□□□□ -1.45
CCDC12-210ENST00000604181 A0A0D9SG42 100 aa6.01□□□□□ -1.45
CCDC12-210ENST00000604181 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
CCDC12-210ENST00000604181 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
CCDC12-210ENST00000604181 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
CCDC12-210ENST00000604181 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
CCDC12-210ENST00000604181 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
CCDC12-210ENST00000604181 MT1LQ93083 61 aa5.96□□□□□ -1.46
CCDC12-210ENST00000604181 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
CCDC12-210ENST00000604181 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CCDC12-210ENST00000604181 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
CCDC12-210ENST00000604181 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
CCDC12-210ENST00000604181 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
CCDC12-210ENST00000604181 A0A1B0GV90 55 aa5.77□□□□□ -1.49
CCDC12-210ENST00000604181 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
CCDC12-210ENST00000604181 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
CCDC12-210ENST00000604181 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
CCDC12-210ENST00000604181 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
CCDC12-210ENST00000604181 J3QR89 54 aa5.71□□□□□ -1.5
CCDC12-210ENST00000604181 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
CCDC12-210ENST00000604181 SMIM20Q8N5G0 67 aa5.7□□□□□ -1.5
CCDC12-210ENST00000604181 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
CCDC12-210ENST00000604181 COA5Q86WW8 74 aa5.63□□□□□ -1.51
CCDC12-210ENST00000604181 A0A1B0GU33 70 aa5.61□□□□□ -1.51
CCDC12-210ENST00000604181 SERP1Q9Y6X1 66 aa5.61□□□□□ -1.51
CCDC12-210ENST00000604181 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CCDC12-210ENST00000604181 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms