RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
CCDC12-209ENST00000604164 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
CCDC12-209ENST00000604164 H3BPC8 53 aa5.28□□□□□ -1.56
CCDC12-209ENST00000604164 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
CCDC12-209ENST00000604164 IMUPQ9GZP8 106 aa5.27□□□□□ -1.57
CCDC12-209ENST00000604164 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
CCDC12-209ENST00000604164 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
CCDC12-209ENST00000604164 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
CCDC12-209ENST00000604164 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
CCDC12-209ENST00000604164 Q5VV11 94 aa5.22□□□□□ -1.57
CCDC12-209ENST00000604164 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.57
CCDC12-209ENST00000604164 H0YAA0 97 aa5.21□□□□□ -1.58
CCDC12-209ENST00000604164 K7ERU9 68 aa5.21□□□□□ -1.58
CCDC12-209ENST00000604164 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
CCDC12-209ENST00000604164 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
CCDC12-209ENST00000604164 MT1BP07438 61 aa5.13□□□□□ -1.59
CCDC12-209ENST00000604164 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
CCDC12-209ENST00000604164 A6NN06 94 aa5.12□□□□□ -1.59
CCDC12-209ENST00000604164 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
CCDC12-209ENST00000604164 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
CCDC12-209ENST00000604164 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
CCDC12-209ENST00000604164 C20orf197Q8N268 126 aa5.11□□□□□ -1.59
CCDC12-209ENST00000604164 ACYP2P14621 99 aa5.07□□□□□ -1.6
CCDC12-209ENST00000604164 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
CCDC12-209ENST00000604164 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
CCDC12-209ENST00000604164 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
CCDC12-209ENST00000604164 R4GN34 69 aa5.03□□□□□ -1.6
CCDC12-209ENST00000604164 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
CCDC12-209ENST00000604164 CHKB-CPT1BH3BT56 60 aa4.98□□□□□ -1.61
CCDC12-209ENST00000604164 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
CCDC12-209ENST00000604164 P0C880 135 aa4.97□□□□□ -1.61
CCDC12-209ENST00000604164 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
CCDC12-209ENST00000604164 M0QZ58 72 aa4.96□□□□□ -1.62
CCDC12-209ENST00000604164 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
CCDC12-209ENST00000604164 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
CCDC12-209ENST00000604164 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
CCDC12-209ENST00000604164 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
CCDC12-209ENST00000604164 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
CCDC12-209ENST00000604164 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
CCDC12-209ENST00000604164 MT1XP80297 61 aa4.83□□□□□ -1.64
CCDC12-209ENST00000604164 COX7CP15954 63 aa4.81□□□□□ -1.64
CCDC12-209ENST00000604164 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
CCDC12-209ENST00000604164 COA5Q86WW8 74 aa4.77□□□□□ -1.65
CCDC12-209ENST00000604164 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
CCDC12-209ENST00000604164 SEC61GP60059 68 aa4.76□□□□□ -1.65
CCDC12-209ENST00000604164 SERP1Q9Y6X1 66 aa4.73□□□□□ -1.65
CCDC12-209ENST00000604164 H7BZZ5 65 aa4.7□□□□□ -1.66
CCDC12-209ENST00000604164 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
CCDC12-209ENST00000604164 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
CCDC12-209ENST00000604164 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
CCDC12-209ENST00000604164 NEBP20929 6669 aa4.65□□□□□ -1.66
CCDC12-209ENST00000604164 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
CCDC12-209ENST00000604164 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
CCDC12-209ENST00000604164 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
CCDC12-209ENST00000604164 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
CCDC12-209ENST00000604164 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
CCDC12-209ENST00000604164 A0A1B0GU33 70 aa4.61□□□□□ -1.67
CCDC12-209ENST00000604164 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
CCDC12-209ENST00000604164 KMT2DO14686 5537 aa4.6□□□□□ -1.67
CCDC12-209ENST00000604164 SPRR2EP22531 72 aa4.6□□□□□ -1.67
CCDC12-209ENST00000604164 SPRR2BP35325 72 aa4.6□□□□□ -1.67
CCDC12-209ENST00000604164 SPRR2AP35326 72 aa4.6□□□□□ -1.67
CCDC12-209ENST00000604164 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
CCDC12-209ENST00000604164 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
CCDC12-209ENST00000604164 A0A1B0GU69 56 aa4.57□□□□□ -1.68
CCDC12-209ENST00000604164 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CCDC12-209ENST00000604164 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
CCDC12-209ENST00000604164 A0A0D9SG42 100 aa4.56□□□□□ -1.68
CCDC12-209ENST00000604164 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
CCDC12-209ENST00000604164 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
CCDC12-209ENST00000604164 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
CCDC12-209ENST00000604164 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
CCDC12-209ENST00000604164 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
CCDC12-209ENST00000604164 SPRR2DP22532 72 aa4.45□□□□□ -1.7
CCDC12-209ENST00000604164 TMEM258P61165 79 aa4.44□□□□□ -1.7
CCDC12-209ENST00000604164 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
CCDC12-209ENST00000604164 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
CCDC12-209ENST00000604164 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
CCDC12-209ENST00000604164 A8MU10 97 aa4.37□□□□□ -1.71
CCDC12-209ENST00000604164 UQCR11O14957 56 aa4.32□□□□□ -1.72
CCDC12-209ENST00000604164 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
CCDC12-209ENST00000604164 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
CCDC12-209ENST00000604164 TNP1P09430 55 aa4.3□□□□□ -1.72
CCDC12-209ENST00000604164 MT1EP04732 61 aa4.29□□□□□ -1.72
CCDC12-209ENST00000604164 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
CCDC12-209ENST00000604164 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
CCDC12-209ENST00000604164 V9GYY9 64 aa4.25□□□□□ -1.73
CCDC12-209ENST00000604164 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
CCDC12-209ENST00000604164 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
CCDC12-209ENST00000604164 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
CCDC12-209ENST00000604164 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
CCDC12-209ENST00000604164 K7ERS5 55 aa4.19□□□□□ -1.74
CCDC12-209ENST00000604164 MT1GP13640 62 aa4.19□□□□□ -1.74
CCDC12-209ENST00000604164 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
CCDC12-209ENST00000604164 Q1T7F1 81 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms