RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 MACF1Q9UPN3 7388 aaKnown RBP9.93□□□□□ -0.82
PPFIA3-208ENST00000602726 MP68P56378 58 aa9.9□□□□□ -0.82
PPFIA3-208ENST00000602726 OCR1Q9BZK8 76 aa9.9□□□□□ -0.82
PPFIA3-208ENST00000602726 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
PPFIA3-208ENST00000602726 A8MUN3 132 aa9.85□□□□□ -0.83
PPFIA3-208ENST00000602726 NDUFC1O43677 76 aa9.85□□□□□ -0.83
PPFIA3-208ENST00000602726 SPRR2GQ9BYE4 73 aa9.85□□□□□ -0.83
PPFIA3-208ENST00000602726 SYNE2Q8WXH0 6885 aaKnown RBP9.83□□□□□ -0.84
PPFIA3-208ENST00000602726 Q5VV11 94 aa9.81□□□□□ -0.84
PPFIA3-208ENST00000602726 IMUPQ9GZP8 106 aa9.81□□□□□ -0.84
PPFIA3-208ENST00000602726 SCGB1A1P11684 91 aa9.78□□□□□ -0.84
PPFIA3-208ENST00000602726 KRTAP19-8Q3LI54 63 aa9.78□□□□□ -0.84
PPFIA3-208ENST00000602726 MT1BP07438 61 aa9.77□□□□□ -0.85
PPFIA3-208ENST00000602726 H3BPC8 53 aa9.75□□□□□ -0.85
PPFIA3-208ENST00000602726 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
PPFIA3-208ENST00000602726 H0YAA0 97 aa9.71□□□□□ -0.86
PPFIA3-208ENST00000602726 A6NN06 94 aa9.68□□□□□ -0.86
PPFIA3-208ENST00000602726 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
PPFIA3-208ENST00000602726 K7ERU9 68 aa9.6□□□□□ -0.87
PPFIA3-208ENST00000602726 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
PPFIA3-208ENST00000602726 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
PPFIA3-208ENST00000602726 KRTAP10-5P60370 271 aa9.54□□□□□ -0.88
PPFIA3-208ENST00000602726 KRTAP6-3Q3LI67 103 aa9.52□□□□□ -0.89
PPFIA3-208ENST00000602726 SMIM20Q8N5G0 67 aa9.51□□□□□ -0.89
PPFIA3-208ENST00000602726 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
PPFIA3-208ENST00000602726 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
PPFIA3-208ENST00000602726 P0C880 135 aa9.4□□□□□ -0.9
PPFIA3-208ENST00000602726 ACYP2P14621 99 aa9.39□□□□□ -0.91
PPFIA3-208ENST00000602726 R4GN34 69 aa9.39□□□□□ -0.91
PPFIA3-208ENST00000602726 M0QZ58 72 aa9.32□□□□□ -0.92
PPFIA3-208ENST00000602726 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
PPFIA3-208ENST00000602726 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
PPFIA3-208ENST00000602726 SNURFQ9Y675 71 aa9.29□□□□□ -0.92
PPFIA3-208ENST00000602726 SPTSSBQ8NFR3 76 aa9.28□□□□□ -0.92
PPFIA3-208ENST00000602726 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
PPFIA3-208ENST00000602726 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
PPFIA3-208ENST00000602726 NEBP20929 6669 aa9.22□□□□□ -0.93
PPFIA3-208ENST00000602726 MUC12Q9UKN1 5478 aa9.19□□□□□ -0.94
PPFIA3-208ENST00000602726 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
PPFIA3-208ENST00000602726 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
PPFIA3-208ENST00000602726 MT1XP80297 61 aa9.18□□□□□ -0.94
PPFIA3-208ENST00000602726 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
PPFIA3-208ENST00000602726 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
PPFIA3-208ENST00000602726 KMT2DO14686 5537 aa9.06□□□□□ -0.96
PPFIA3-208ENST00000602726 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
PPFIA3-208ENST00000602726 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
PPFIA3-208ENST00000602726 COX7CP15954 63 aa8.91□□□□□ -0.98
PPFIA3-208ENST00000602726 COA5Q86WW8 74 aa8.9□□□□□ -0.98
PPFIA3-208ENST00000602726 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
PPFIA3-208ENST00000602726 SPRR2FQ96RM1 72 aa8.88□□□□□ -0.99
PPFIA3-208ENST00000602726 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
PPFIA3-208ENST00000602726 KRTAP20-1Q3LI63 56 aa8.79□□□□□ -1
PPFIA3-208ENST00000602726 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
PPFIA3-208ENST00000602726 KRTAP4-8A0A0G2JLE6 195 aa8.76□□□□□ -1.01
PPFIA3-208ENST00000602726 H7BZZ5 65 aa8.76□□□□□ -1.01
PPFIA3-208ENST00000602726 SEC61GP60059 68 aa8.76□□□□□ -1.01
PPFIA3-208ENST00000602726 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
PPFIA3-208ENST00000602726 SPRR2EP22531 72 aa8.74□□□□□ -1.01
PPFIA3-208ENST00000602726 SPRR2BP35325 72 aa8.74□□□□□ -1.01
PPFIA3-208ENST00000602726 SPRR2AP35326 72 aa8.74□□□□□ -1.01
PPFIA3-208ENST00000602726 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
PPFIA3-208ENST00000602726 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
PPFIA3-208ENST00000602726 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
PPFIA3-208ENST00000602726 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
PPFIA3-208ENST00000602726 ANAPC13Q9BS18 74 aa8.65□□□□□ -1.02
PPFIA3-208ENST00000602726 LCE1AQ5T7P2 110 aa8.61□□□□□ -1.03
PPFIA3-208ENST00000602726 A0A0D9SG42 100 aa8.59□□□□□ -1.03
PPFIA3-208ENST00000602726 KRTAP2-3P0C7H8 128 aa8.59□□□□□ -1.03
PPFIA3-208ENST00000602726 KRTAP2-4Q9BYR9 128 aa8.59□□□□□ -1.03
PPFIA3-208ENST00000602726 A0A1B0GU33 70 aa8.58□□□□□ -1.04
PPFIA3-208ENST00000602726 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
PPFIA3-208ENST00000602726 A0A1B0GU69 56 aa8.47□□□□□ -1.05
PPFIA3-208ENST00000602726 SPINT4Q6UDR6 99 aa8.47□□□□□ -1.05
PPFIA3-208ENST00000602726 CCDC179H3BU77 68 aa8.45□□□□□ -1.06
PPFIA3-208ENST00000602726 SPRR2DP22532 72 aa8.45□□□□□ -1.06
PPFIA3-208ENST00000602726 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
PPFIA3-208ENST00000602726 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
PPFIA3-208ENST00000602726 ATP5EP56381 51 aaPredicted RBP8.35□□□□□ -1.07
PPFIA3-208ENST00000602726 KRTAP2-2Q9BYT5 123 aa8.32□□□□□ -1.08
PPFIA3-208ENST00000602726 KRTAP2-1Q9BYU5 128 aa8.32□□□□□ -1.08
PPFIA3-208ENST00000602726 A8MU10 97 aa8.26□□□□□ -1.09
PPFIA3-208ENST00000602726 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
PPFIA3-208ENST00000602726 KRTAP19-7Q3SYF9 63 aa8.2□□□□□ -1.1
PPFIA3-208ENST00000602726 LCE3BQ5TA77 95 aa8.2□□□□□ -1.1
PPFIA3-208ENST00000602726 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
PPFIA3-208ENST00000602726 MT1EP04732 61 aa8.14□□□□□ -1.11
PPFIA3-208ENST00000602726 TMEM258P61165 79 aa8.14□□□□□ -1.11
PPFIA3-208ENST00000602726 LCE5AQ5TCM9 118 aa8.06□□□□□ -1.12
PPFIA3-208ENST00000602726 KRTAP19-3Q7Z4W3 81 aa8.06□□□□□ -1.12
PPFIA3-208ENST00000602726 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
PPFIA3-208ENST00000602726 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
PPFIA3-208ENST00000602726 TNP1P09430 55 aa7.99□□□□□ -1.13
PPFIA3-208ENST00000602726 DSTQ03001 7570 aaKnown RBP7.97□□□□□ -1.13
PPFIA3-208ENST00000602726 UQCR11O14957 56 aa7.96□□□□□ -1.14
PPFIA3-208ENST00000602726 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
PPFIA3-208ENST00000602726 MT1GP13640 62 aa7.88□□□□□ -1.15
PPFIA3-208ENST00000602726 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
PPFIA3-208ENST00000602726 MT1LQ93083 61 aa7.79□□□□□ -1.16
PPFIA3-208ENST00000602726 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
PPFIA3-208ENST00000602726 MT1MQ8N339 61 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms