RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
SSBP4-209ENST00000601357 A6NN06 94 aa10.08□□□□□ -0.8
SSBP4-209ENST00000601357 UQCRQO14949 82 aa10.02□□□□□ -0.81
SSBP4-209ENST00000601357 HIST1H4AP62805 103 aaKnown RBP10.01□□□□□ -0.81
SSBP4-209ENST00000601357 KRTAP10-5P60370 271 aa9.99□□□□□ -0.81
SSBP4-209ENST00000601357 ATOX1O00244 68 aa9.98□□□□□ -0.81
SSBP4-209ENST00000601357 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
SSBP4-209ENST00000601357 H0Y9P7 68 aa9.97□□□□□ -0.81
SSBP4-209ENST00000601357 J3QR89 54 aa9.94□□□□□ -0.82
SSBP4-209ENST00000601357 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
SSBP4-209ENST00000601357 H0YAA0 97 aa9.89□□□□□ -0.83
SSBP4-209ENST00000601357 NDUFC1O43677 76 aa9.89□□□□□ -0.83
SSBP4-209ENST00000601357 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
SSBP4-209ENST00000601357 NEBP20929 6669 aa9.86□□□□□ -0.83
SSBP4-209ENST00000601357 A8MUN3 132 aa9.85□□□□□ -0.83
SSBP4-209ENST00000601357 MUC12Q9UKN1 5478 aa9.83□□□□□ -0.84
SSBP4-209ENST00000601357 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
SSBP4-209ENST00000601357 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
SSBP4-209ENST00000601357 ADM2Q7Z4H4 148 aa9.73□□□□□ -0.85
SSBP4-209ENST00000601357 KRTAP5-9P26371 169 aa9.71□□□□□ -0.86
SSBP4-209ENST00000601357 MP68P56378 58 aa9.71□□□□□ -0.86
SSBP4-209ENST00000601357 K7ERU9 68 aa9.66□□□□□ -0.86
SSBP4-209ENST00000601357 KMT2DO14686 5537 aa9.61□□□□□ -0.87
SSBP4-209ENST00000601357 H3BPC8 53 aa9.6□□□□□ -0.87
SSBP4-209ENST00000601357 MDN1Q9NU22 5596 aa9.56□□□□□ -0.88
SSBP4-209ENST00000601357 SCGB1A1P11684 91 aa9.55□□□□□ -0.88
SSBP4-209ENST00000601357 MT1XP80297 61 aa9.55□□□□□ -0.88
SSBP4-209ENST00000601357 DMAC1Q96GE9 116 aa9.55□□□□□ -0.88
SSBP4-209ENST00000601357 P0C880 135 aa9.53□□□□□ -0.88
SSBP4-209ENST00000601357 PRO2289Q9P1D8 64 aa9.52□□□□□ -0.89
SSBP4-209ENST00000601357 R4GN34 69 aa9.5□□□□□ -0.89
SSBP4-209ENST00000601357 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
SSBP4-209ENST00000601357 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
SSBP4-209ENST00000601357 KRTAP20-1Q3LI63 56 aa9.45□□□□□ -0.9
SSBP4-209ENST00000601357 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
SSBP4-209ENST00000601357 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
SSBP4-209ENST00000601357 M0QZ58 72 aa9.41□□□□□ -0.9
SSBP4-209ENST00000601357 KRTAP12-2P59991 146 aa9.34□□□□□ -0.91
SSBP4-209ENST00000601357 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
SSBP4-209ENST00000601357 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
SSBP4-209ENST00000601357 SPRR2FQ96RM1 72 aa9.33□□□□□ -0.92
SSBP4-209ENST00000601357 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
SSBP4-209ENST00000601357 KRTAP8-1Q8IUC2 63 aa9.26□□□□□ -0.93
SSBP4-209ENST00000601357 ACYP2P14621 99 aa9.25□□□□□ -0.93
SSBP4-209ENST00000601357 SPRR2EP22531 72 aa9.22□□□□□ -0.93
SSBP4-209ENST00000601357 SPRR2BP35325 72 aa9.22□□□□□ -0.93
SSBP4-209ENST00000601357 SPRR2AP35326 72 aa9.22□□□□□ -0.93
SSBP4-209ENST00000601357 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
SSBP4-209ENST00000601357 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
SSBP4-209ENST00000601357 KRTAP4-8A0A0G2JLE6 195 aa9.15□□□□□ -0.94
SSBP4-209ENST00000601357 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
SSBP4-209ENST00000601357 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.94
SSBP4-209ENST00000601357 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
SSBP4-209ENST00000601357 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
SSBP4-209ENST00000601357 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
SSBP4-209ENST00000601357 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
SSBP4-209ENST00000601357 CHKB-CPT1BH3BT56 60 aa9.05□□□□□ -0.96
SSBP4-209ENST00000601357 SNURFQ9Y675 71 aa9.02□□□□□ -0.97
SSBP4-209ENST00000601357 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
SSBP4-209ENST00000601357 SPRR2DP22532 72 aa8.92□□□□□ -0.98
SSBP4-209ENST00000601357 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
SSBP4-209ENST00000601357 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
SSBP4-209ENST00000601357 COX7CP15954 63 aa8.87□□□□□ -0.99
SSBP4-209ENST00000601357 KRTAP13-4Q3LI77 160 aa8.87□□□□□ -0.99
SSBP4-209ENST00000601357 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
SSBP4-209ENST00000601357 COA5Q86WW8 74 aa8.7□□□□□ -1.02
SSBP4-209ENST00000601357 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
SSBP4-209ENST00000601357 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
SSBP4-209ENST00000601357 H7BZZ5 65 aa8.62□□□□□ -1.03
SSBP4-209ENST00000601357 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
SSBP4-209ENST00000601357 SEC61GP60059 68 aa8.55□□□□□ -1.04
SSBP4-209ENST00000601357 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
SSBP4-209ENST00000601357 SERP1Q9Y6X1 66 aa8.54□□□□□ -1.04
SSBP4-209ENST00000601357 A0A0D9SG42 100 aa8.52□□□□□ -1.05
SSBP4-209ENST00000601357 PCP4P48539 62 aa8.5□□□□□ -1.05
SSBP4-209ENST00000601357 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
SSBP4-209ENST00000601357 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
SSBP4-209ENST00000601357 LCE5AQ5TCM9 118 aa8.47□□□□□ -1.05
SSBP4-209ENST00000601357 A0A1B0GU33 70 aa8.46□□□□□ -1.06
SSBP4-209ENST00000601357 MT1EP04732 61 aa8.46□□□□□ -1.06
SSBP4-209ENST00000601357 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
SSBP4-209ENST00000601357 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
SSBP4-209ENST00000601357 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
SSBP4-209ENST00000601357 KRTAP19-3Q7Z4W3 81 aa8.4□□□□□ -1.06
SSBP4-209ENST00000601357 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
SSBP4-209ENST00000601357 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
SSBP4-209ENST00000601357 TMEM258P61165 79 aa8.25□□□□□ -1.09
SSBP4-209ENST00000601357 A0A1B0GU69 56 aa8.24□□□□□ -1.09
SSBP4-209ENST00000601357 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
SSBP4-209ENST00000601357 MT1GP13640 62 aa8.19□□□□□ -1.1
SSBP4-209ENST00000601357 A8MU10 97 aa8.17□□□□□ -1.1
SSBP4-209ENST00000601357 PRR15LQ9BU68 103 aa8.12□□□□□ -1.11
SSBP4-209ENST00000601357 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
SSBP4-209ENST00000601357 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
SSBP4-209ENST00000601357 MT1LQ93083 61 aa8.06□□□□□ -1.12
SSBP4-209ENST00000601357 MT1MQ8N339 61 aa8.05□□□□□ -1.12
SSBP4-209ENST00000601357 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
SSBP4-209ENST00000601357 GPR98Q8WXG9 6306 aa8.03□□□□□ -1.12
SSBP4-209ENST00000601357 LCE3AQ5TA76 89 aa8.02□□□□□ -1.13
SSBP4-209ENST00000601357 TNP1P09430 55 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms