RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 A0A1B0GV90 55 aa7.96□□□□□ -1.14
HERC3-214ENST00000601319 UQCRQO14949 82 aa7.96□□□□□ -1.14
HERC3-214ENST00000601319 LCA10Q71F78 164 aa7.96□□□□□ -1.14
HERC3-214ENST00000601319 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
HERC3-214ENST00000601319 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
HERC3-214ENST00000601319 ATOX1O00244 68 aa7.93□□□□□ -1.14
HERC3-214ENST00000601319 KRTAP4-11Q9BYQ6 195 aa7.91□□□□□ -1.14
HERC3-214ENST00000601319 A0A087WVE0 104 aa7.9□□□□□ -1.14
HERC3-214ENST00000601319 H0Y9P7 68 aa7.9□□□□□ -1.14
HERC3-214ENST00000601319 FAM236AA0A1B0GUQ0 79 aa7.86□□□□□ -1.15
HERC3-214ENST00000601319 FAM236BA0A1B0GV22 79 aa7.86□□□□□ -1.15
HERC3-214ENST00000601319 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
HERC3-214ENST00000601319 J3QR89 54 aa7.82□□□□□ -1.16
HERC3-214ENST00000601319 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
HERC3-214ENST00000601319 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
HERC3-214ENST00000601319 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
HERC3-214ENST00000601319 A8MUN3 132 aa7.77□□□□□ -1.17
HERC3-214ENST00000601319 LCE4AQ5TA78 99 aa7.77□□□□□ -1.17
HERC3-214ENST00000601319 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
HERC3-214ENST00000601319 LINC00208Q96KT6 92 aa7.76□□□□□ -1.17
HERC3-214ENST00000601319 MP68P56378 58 aa7.75□□□□□ -1.17
HERC3-214ENST00000601319 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
HERC3-214ENST00000601319 NDUFC1O43677 76 aa7.71□□□□□ -1.18
HERC3-214ENST00000601319 H3BPC8 53 aa7.69□□□□□ -1.18
HERC3-214ENST00000601319 MT1BP07438 61 aa7.69□□□□□ -1.18
HERC3-214ENST00000601319 Q5VV11 94 aa7.69□□□□□ -1.18
HERC3-214ENST00000601319 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
HERC3-214ENST00000601319 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
HERC3-214ENST00000601319 H0YAA0 97 aa7.68□□□□□ -1.18
HERC3-214ENST00000601319 KRTAP5-3Q6L8H2 238 aa7.67□□□□□ -1.18
HERC3-214ENST00000601319 SYNE2Q8WXH0 6885 aaKnown RBP7.67□□□□□ -1.18
HERC3-214ENST00000601319 KRTAP19-4Q3LI73 84 aa7.63□□□□□ -1.19
HERC3-214ENST00000601319 SCGB1A1P11684 91 aa7.62□□□□□ -1.19
HERC3-214ENST00000601319 A6NN06 94 aa7.56□□□□□ -1.2
HERC3-214ENST00000601319 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
HERC3-214ENST00000601319 K7ERU9 68 aa7.55□□□□□ -1.2
HERC3-214ENST00000601319 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
HERC3-214ENST00000601319 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
HERC3-214ENST00000601319 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
HERC3-214ENST00000601319 KRTAP6-3Q3LI67 103 aa7.49□□□□□ -1.21
HERC3-214ENST00000601319 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
HERC3-214ENST00000601319 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.22
HERC3-214ENST00000601319 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
HERC3-214ENST00000601319 H3BS24 57 aa7.42□□□□□ -1.22
HERC3-214ENST00000601319 C20orf197Q8N268 126 aa7.42□□□□□ -1.22
HERC3-214ENST00000601319 P0C880 135 aa7.37□□□□□ -1.23
HERC3-214ENST00000601319 ACYP2P14621 99 aa7.35□□□□□ -1.23
HERC3-214ENST00000601319 R4GN34 69 aa7.35□□□□□ -1.23
HERC3-214ENST00000601319 M0QZ58 72 aa7.29□□□□□ -1.24
HERC3-214ENST00000601319 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
HERC3-214ENST00000601319 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
HERC3-214ENST00000601319 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
HERC3-214ENST00000601319 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
HERC3-214ENST00000601319 MT1XP80297 61 aa7.23□□□□□ -1.25
HERC3-214ENST00000601319 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
HERC3-214ENST00000601319 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
HERC3-214ENST00000601319 NEBP20929 6669 aa7.23□□□□□ -1.25
HERC3-214ENST00000601319 KRTAP5-9P26371 169 aa7.21□□□□□ -1.26
HERC3-214ENST00000601319 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
HERC3-214ENST00000601319 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
HERC3-214ENST00000601319 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
HERC3-214ENST00000601319 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
HERC3-214ENST00000601319 KMT2DO14686 5537 aa7.06□□□□□ -1.28
HERC3-214ENST00000601319 COX7CP15954 63 aa7.01□□□□□ -1.29
HERC3-214ENST00000601319 COA5Q86WW8 74 aa6.98□□□□□ -1.29
HERC3-214ENST00000601319 MDN1Q9NU22 5596 aa6.96□□□□□ -1.29
HERC3-214ENST00000601319 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
HERC3-214ENST00000601319 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
HERC3-214ENST00000601319 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
HERC3-214ENST00000601319 H7BZZ5 65 aa6.9□□□□□ -1.3
HERC3-214ENST00000601319 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
HERC3-214ENST00000601319 KRTAP10-7P60409 375 aaPredicted RBP6.88□□□□□ -1.31
HERC3-214ENST00000601319 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
HERC3-214ENST00000601319 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
HERC3-214ENST00000601319 SPRR2EP22531 72 aa6.83□□□□□ -1.32
HERC3-214ENST00000601319 SPRR2BP35325 72 aa6.83□□□□□ -1.32
HERC3-214ENST00000601319 SPRR2AP35326 72 aa6.83□□□□□ -1.32
HERC3-214ENST00000601319 SEC61GP60059 68 aa6.83□□□□□ -1.32
HERC3-214ENST00000601319 PCP4P48539 62 aa6.82□□□□□ -1.32
HERC3-214ENST00000601319 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
HERC3-214ENST00000601319 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
HERC3-214ENST00000601319 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
HERC3-214ENST00000601319 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
HERC3-214ENST00000601319 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
HERC3-214ENST00000601319 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
HERC3-214ENST00000601319 A0A1B0GU33 70 aa6.7□□□□□ -1.34
HERC3-214ENST00000601319 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
HERC3-214ENST00000601319 A0A0D9SG42 100 aa6.66□□□□□ -1.34
HERC3-214ENST00000601319 A0A1B0GU69 56 aa6.62□□□□□ -1.35
HERC3-214ENST00000601319 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
HERC3-214ENST00000601319 SPRR2DP22532 72 aa6.61□□□□□ -1.35
HERC3-214ENST00000601319 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
HERC3-214ENST00000601319 KRTAP12-1P59990 96 aa6.59□□□□□ -1.35
HERC3-214ENST00000601319 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
HERC3-214ENST00000601319 SMIM26A0A096LP01 95 aa6.54□□□□□ -1.36
HERC3-214ENST00000601319 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
HERC3-214ENST00000601319 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
HERC3-214ENST00000601319 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
HERC3-214ENST00000601319 PRR15LQ9BU68 103 aa6.46□□□□□ -1.38
HERC3-214ENST00000601319 A8MU10 97 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms