RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
SSBP4-207ENST00000600244 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
SSBP4-207ENST00000600244 H0Y9P7 68 aa8.14□□□□□ -1.11
SSBP4-207ENST00000600244 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
SSBP4-207ENST00000600244 GPR98Q8WXG9 6306 aa8.14□□□□□ -1.11
SSBP4-207ENST00000600244 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
SSBP4-207ENST00000600244 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
SSBP4-207ENST00000600244 ATOX1O00244 68 aa8.13□□□□□ -1.11
SSBP4-207ENST00000600244 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
SSBP4-207ENST00000600244 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
SSBP4-207ENST00000600244 MT1BP07438 61 aa8.12□□□□□ -1.11
SSBP4-207ENST00000600244 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
SSBP4-207ENST00000600244 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
SSBP4-207ENST00000600244 SPRR2EP22531 72 aa8.07□□□□□ -1.12
SSBP4-207ENST00000600244 SPRR2BP35325 72 aa8.07□□□□□ -1.12
SSBP4-207ENST00000600244 SPRR2AP35326 72 aa8.07□□□□□ -1.12
SSBP4-207ENST00000600244 C4orf26Q17RF5 130 aa8.06□□□□□ -1.12
SSBP4-207ENST00000600244 SMIM20Q8N5G0 67 aa8.06□□□□□ -1.12
SSBP4-207ENST00000600244 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
SSBP4-207ENST00000600244 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
SSBP4-207ENST00000600244 MP68P56378 58 aa8.05□□□□□ -1.12
SSBP4-207ENST00000600244 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
SSBP4-207ENST00000600244 H3BPC8 53 aa8.04□□□□□ -1.12
SSBP4-207ENST00000600244 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
SSBP4-207ENST00000600244 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
SSBP4-207ENST00000600244 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
SSBP4-207ENST00000600244 Q5VV11 94 aa7.97□□□□□ -1.13
SSBP4-207ENST00000600244 SPRR2FQ96RM1 72 aa7.97□□□□□ -1.13
SSBP4-207ENST00000600244 KRTAP19-8Q3LI54 63 aa7.95□□□□□ -1.14
SSBP4-207ENST00000600244 SERP2Q8N6R1 65 aa7.94□□□□□ -1.14
SSBP4-207ENST00000600244 LCE1AQ5T7P2 110 aa7.89□□□□□ -1.15
SSBP4-207ENST00000600244 A8MUN3 132 aa7.83□□□□□ -1.16
SSBP4-207ENST00000600244 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
SSBP4-207ENST00000600244 COX7CP15954 63 aa7.81□□□□□ -1.16
SSBP4-207ENST00000600244 C20orf197Q8N268 126 aa7.81□□□□□ -1.16
SSBP4-207ENST00000600244 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
SSBP4-207ENST00000600244 SPRR2DP22532 72 aa7.8□□□□□ -1.16
SSBP4-207ENST00000600244 S4R3F8 94 aa7.8□□□□□ -1.16
SSBP4-207ENST00000600244 LCA10Q71F78 164 aa7.79□□□□□ -1.16
SSBP4-207ENST00000600244 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
SSBP4-207ENST00000600244 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
SSBP4-207ENST00000600244 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
SSBP4-207ENST00000600244 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
SSBP4-207ENST00000600244 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
SSBP4-207ENST00000600244 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
SSBP4-207ENST00000600244 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
SSBP4-207ENST00000600244 NDUFC1O43677 76 aa7.63□□□□□ -1.19
SSBP4-207ENST00000600244 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
SSBP4-207ENST00000600244 H7BZZ5 65 aa7.62□□□□□ -1.19
SSBP4-207ENST00000600244 ACYP2P14621 99 aa7.62□□□□□ -1.19
SSBP4-207ENST00000600244 CCDC179H3BU77 68 aa7.59□□□□□ -1.19
SSBP4-207ENST00000600244 DSTQ03001 7570 aaKnown RBP7.55□□□□□ -1.2
SSBP4-207ENST00000600244 H0YAA0 97 aa7.52□□□□□ -1.21
SSBP4-207ENST00000600244 CHKB-CPT1BH3BT56 60 aa7.42□□□□□ -1.22
SSBP4-207ENST00000600244 COA5Q86WW8 74 aa7.42□□□□□ -1.22
SSBP4-207ENST00000600244 KRTAP4-9Q9BYQ8 210 aa7.42□□□□□ -1.22
SSBP4-207ENST00000600244 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
SSBP4-207ENST00000600244 ADM2Q7Z4H4 148 aa7.39□□□□□ -1.23
SSBP4-207ENST00000600244 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
SSBP4-207ENST00000600244 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
SSBP4-207ENST00000600244 MT1XP80297 61 aa7.37□□□□□ -1.23
SSBP4-207ENST00000600244 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
SSBP4-207ENST00000600244 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
SSBP4-207ENST00000600244 ATP5EP56381 51 aaPredicted RBP7.35□□□□□ -1.23
SSBP4-207ENST00000600244 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
SSBP4-207ENST00000600244 PRO2289Q9P1D8 64 aa7.35□□□□□ -1.23
SSBP4-207ENST00000600244 P0C880 135 aa7.32□□□□□ -1.24
SSBP4-207ENST00000600244 TMEM258P61165 79 aa7.32□□□□□ -1.24
SSBP4-207ENST00000600244 PCP4P48539 62 aa7.19□□□□□ -1.26
SSBP4-207ENST00000600244 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
SSBP4-207ENST00000600244 R4GN34 69 aa7.15□□□□□ -1.26
SSBP4-207ENST00000600244 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
SSBP4-207ENST00000600244 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
SSBP4-207ENST00000600244 KRTAP5-10Q6L8G5 202 aa7.13□□□□□ -1.27
SSBP4-207ENST00000600244 M0QZ58 72 aa7.12□□□□□ -1.27
SSBP4-207ENST00000600244 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
SSBP4-207ENST00000600244 SEC61GP60059 68 aa7.06□□□□□ -1.28
SSBP4-207ENST00000600244 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
SSBP4-207ENST00000600244 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
SSBP4-207ENST00000600244 A0A1B0GU69 56 aa7.01□□□□□ -1.29
SSBP4-207ENST00000600244 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
SSBP4-207ENST00000600244 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
SSBP4-207ENST00000600244 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
SSBP4-207ENST00000600244 KRTAP5-7Q6L8G8 165 aa6.98□□□□□ -1.29
SSBP4-207ENST00000600244 A0A1B0GU33 70 aa6.96□□□□□ -1.3
SSBP4-207ENST00000600244 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
SSBP4-207ENST00000600244 MT4P47944 62 aa6.91□□□□□ -1.3
SSBP4-207ENST00000600244 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
SSBP4-207ENST00000600244 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
SSBP4-207ENST00000600244 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
SSBP4-207ENST00000600244 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
SSBP4-207ENST00000600244 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
SSBP4-207ENST00000600244 Q1T7F1 81 aa6.84□□□□□ -1.31
SSBP4-207ENST00000600244 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
SSBP4-207ENST00000600244 V9GYY9 64 aa6.82□□□□□ -1.32
SSBP4-207ENST00000600244 A0A0D9SG42 100 aa6.76□□□□□ -1.33
SSBP4-207ENST00000600244 KRTAP5-3Q6L8H2 238 aa6.74□□□□□ -1.33
SSBP4-207ENST00000600244 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
SSBP4-207ENST00000600244 A8MU10 97 aa6.72□□□□□ -1.33
SSBP4-207ENST00000600244 UQCR11O14957 56 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms