RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
CCDC9-204ENST00000599398 MP68P56378 58 aa10.17□□□□□ -0.78
CCDC9-204ENST00000599398 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
CCDC9-204ENST00000599398 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
CCDC9-204ENST00000599398 MACF1Q9UPN3 7388 aaKnown RBP10.15□□□□□ -0.78
CCDC9-204ENST00000599398 NDUFC1O43677 76 aa10.14□□□□□ -0.79
CCDC9-204ENST00000599398 Q5VV11 94 aa10.14□□□□□ -0.79
CCDC9-204ENST00000599398 A8MUN3 132 aa10.11□□□□□ -0.79
CCDC9-204ENST00000599398 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
CCDC9-204ENST00000599398 MT1BP07438 61 aa10.09□□□□□ -0.79
CCDC9-204ENST00000599398 KRTAP19-8Q3LI54 63 aa10.08□□□□□ -0.8
CCDC9-204ENST00000599398 SCGB1A1P11684 91 aa10.04□□□□□ -0.8
CCDC9-204ENST00000599398 CRIPTQ9P021 101 aa10.04□□□□□ -0.8
CCDC9-204ENST00000599398 A6NN06 94 aa10.01□□□□□ -0.81
CCDC9-204ENST00000599398 SYNE2Q8WXH0 6885 aaKnown RBP10.01□□□□□ -0.81
CCDC9-204ENST00000599398 H3BPC8 53 aa9.99□□□□□ -0.81
CCDC9-204ENST00000599398 H0YAA0 97 aa9.98□□□□□ -0.81
CCDC9-204ENST00000599398 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
CCDC9-204ENST00000599398 KRTAP10-5P60370 271 aa9.86□□□□□ -0.83
CCDC9-204ENST00000599398 KRTAP6-3Q3LI67 103 aa9.86□□□□□ -0.83
CCDC9-204ENST00000599398 DMAC1Q96GE9 116 aa9.85□□□□□ -0.83
CCDC9-204ENST00000599398 MT-ATP8P03928 68 aa9.83□□□□□ -0.84
CCDC9-204ENST00000599398 K7ERU9 68 aa9.81□□□□□ -0.84
CCDC9-204ENST00000599398 SMIM20Q8N5G0 67 aa9.73□□□□□ -0.85
CCDC9-204ENST00000599398 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
CCDC9-204ENST00000599398 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
CCDC9-204ENST00000599398 P0C880 135 aa9.7□□□□□ -0.86
CCDC9-204ENST00000599398 R4GN34 69 aa9.69□□□□□ -0.86
CCDC9-204ENST00000599398 ACYP2P14621 99 aa9.64□□□□□ -0.87
CCDC9-204ENST00000599398 M0QZ58 72 aa9.61□□□□□ -0.87
CCDC9-204ENST00000599398 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
CCDC9-204ENST00000599398 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
CCDC9-204ENST00000599398 PRO2289Q9P1D8 64 aa9.55□□□□□ -0.88
CCDC9-204ENST00000599398 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
CCDC9-204ENST00000599398 SPTSSBQ8NFR3 76 aa9.53□□□□□ -0.88
CCDC9-204ENST00000599398 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
CCDC9-204ENST00000599398 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
CCDC9-204ENST00000599398 MT1XP80297 61 aa9.49□□□□□ -0.89
CCDC9-204ENST00000599398 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
CCDC9-204ENST00000599398 KRTAP5-9P26371 169 aa9.41□□□□□ -0.9
CCDC9-204ENST00000599398 SERP2Q8N6R1 65 aa9.4□□□□□ -0.9
CCDC9-204ENST00000599398 NEBP20929 6669 aa9.4□□□□□ -0.91
CCDC9-204ENST00000599398 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
CCDC9-204ENST00000599398 KMT2DO14686 5537 aa9.33□□□□□ -0.92
CCDC9-204ENST00000599398 MDN1Q9NU22 5596 aa9.24□□□□□ -0.93
CCDC9-204ENST00000599398 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
CCDC9-204ENST00000599398 SPRR2FQ96RM1 72 aa9.21□□□□□ -0.94
CCDC9-204ENST00000599398 KRTAP8-1Q8IUC2 63 aa9.2□□□□□ -0.94
CCDC9-204ENST00000599398 COA5Q86WW8 74 aa9.14□□□□□ -0.95
CCDC9-204ENST00000599398 KRTAP20-1Q3LI63 56 aa9.13□□□□□ -0.95
CCDC9-204ENST00000599398 COX7CP15954 63 aa9.12□□□□□ -0.95
CCDC9-204ENST00000599398 KRTAP4-8A0A0G2JLE6 195 aa9.07□□□□□ -0.96
CCDC9-204ENST00000599398 KRTAP10-7P60409 375 aaPredicted RBP9.07□□□□□ -0.96
CCDC9-204ENST00000599398 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
CCDC9-204ENST00000599398 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
CCDC9-204ENST00000599398 SPRR2EP22531 72 aa9.06□□□□□ -0.96
CCDC9-204ENST00000599398 SPRR2BP35325 72 aa9.06□□□□□ -0.96
CCDC9-204ENST00000599398 SPRR2AP35326 72 aa9.06□□□□□ -0.96
CCDC9-204ENST00000599398 SEC61GP60059 68 aa9□□□□□ -0.97
CCDC9-204ENST00000599398 KRTAP10-12P60413 245 aa9□□□□□ -0.97
CCDC9-204ENST00000599398 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
CCDC9-204ENST00000599398 H7BZZ5 65 aa8.97□□□□□ -0.97
CCDC9-204ENST00000599398 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
CCDC9-204ENST00000599398 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
CCDC9-204ENST00000599398 LCE1AQ5T7P2 110 aa8.91□□□□□ -0.98
CCDC9-204ENST00000599398 KRTAP2-3P0C7H8 128 aa8.89□□□□□ -0.99
CCDC9-204ENST00000599398 KRTAP2-4Q9BYR9 128 aa8.89□□□□□ -0.99
CCDC9-204ENST00000599398 A0A0D9SG42 100 aa8.86□□□□□ -0.99
CCDC9-204ENST00000599398 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
CCDC9-204ENST00000599398 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
CCDC9-204ENST00000599398 A0A1B0GU33 70 aa8.81□□□□□ -1
CCDC9-204ENST00000599398 SPRR2DP22532 72 aa8.76□□□□□ -1.01
CCDC9-204ENST00000599398 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
CCDC9-204ENST00000599398 A0A1B0GU69 56 aa8.69□□□□□ -1.02
CCDC9-204ENST00000599398 CCDC179H3BU77 68 aa8.66□□□□□ -1.02
CCDC9-204ENST00000599398 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
CCDC9-204ENST00000599398 KRTAP2-2Q9BYT5 123 aa8.62□□□□□ -1.03
CCDC9-204ENST00000599398 KRTAP2-1Q9BYU5 128 aa8.62□□□□□ -1.03
CCDC9-204ENST00000599398 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
CCDC9-204ENST00000599398 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
CCDC9-204ENST00000599398 A8MU10 97 aa8.5□□□□□ -1.05
CCDC9-204ENST00000599398 LCE3BQ5TA77 95 aa8.5□□□□□ -1.05
CCDC9-204ENST00000599398 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
CCDC9-204ENST00000599398 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
CCDC9-204ENST00000599398 MT1EP04732 61 aa8.4□□□□□ -1.06
CCDC9-204ENST00000599398 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
CCDC9-204ENST00000599398 LCE5AQ5TCM9 118 aa8.33□□□□□ -1.08
CCDC9-204ENST00000599398 KRTAP19-3Q7Z4W3 81 aa8.33□□□□□ -1.08
CCDC9-204ENST00000599398 TMEM258P61165 79 aa8.32□□□□□ -1.08
CCDC9-204ENST00000599398 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
CCDC9-204ENST00000599398 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
CCDC9-204ENST00000599398 TNP1P09430 55 aa8.23□□□□□ -1.09
CCDC9-204ENST00000599398 UQCR11O14957 56 aa8.16□□□□□ -1.1
CCDC9-204ENST00000599398 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
CCDC9-204ENST00000599398 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.1
CCDC9-204ENST00000599398 MT1GP13640 62 aa8.13□□□□□ -1.11
CCDC9-204ENST00000599398 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
CCDC9-204ENST00000599398 MT1LQ93083 61 aa8.04□□□□□ -1.12
CCDC9-204ENST00000599398 MT1MQ8N339 61 aa8□□□□□ -1.13
CCDC9-204ENST00000599398 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms