RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LCA10Q71F78 164 aa6.45□□□□□ -1.38
ZNF548-209ENST00000598895 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
ZNF548-209ENST00000598895 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
ZNF548-209ENST00000598895 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
ZNF548-209ENST00000598895 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
ZNF548-209ENST00000598895 SEC61GP60059 68 aa6.42□□□□□ -1.38
ZNF548-209ENST00000598895 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
ZNF548-209ENST00000598895 A8MU10 97 aa6.39□□□□□ -1.39
ZNF548-209ENST00000598895 A6NN06 94 aa6.38□□□□□ -1.39
ZNF548-209ENST00000598895 SPINK7P58062 85 aa6.37□□□□□ -1.39
ZNF548-209ENST00000598895 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
ZNF548-209ENST00000598895 A0A1B0GU69 56 aa6.34□□□□□ -1.39
ZNF548-209ENST00000598895 A8MUU9 505 aa6.33□□□□□ -1.4
ZNF548-209ENST00000598895 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
ZNF548-209ENST00000598895 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
ZNF548-209ENST00000598895 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
ZNF548-209ENST00000598895 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
ZNF548-209ENST00000598895 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
ZNF548-209ENST00000598895 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
ZNF548-209ENST00000598895 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
ZNF548-209ENST00000598895 UQCR11O14957 56 aa6.26□□□□□ -1.41
ZNF548-209ENST00000598895 MT1HP80294 61 aa6.26□□□□□ -1.41
ZNF548-209ENST00000598895 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
ZNF548-209ENST00000598895 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.42
ZNF548-209ENST00000598895 M0R2T5 61 aa6.18□□□□□ -1.42
ZNF548-209ENST00000598895 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
ZNF548-209ENST00000598895 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
ZNF548-209ENST00000598895 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
ZNF548-209ENST00000598895 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
ZNF548-209ENST00000598895 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
ZNF548-209ENST00000598895 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
ZNF548-209ENST00000598895 A0A1B0GU33 70 aa5.97□□□□□ -1.45
ZNF548-209ENST00000598895 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
ZNF548-209ENST00000598895 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
ZNF548-209ENST00000598895 K7ERS5 55 aa5.93□□□□□ -1.46
ZNF548-209ENST00000598895 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
ZNF548-209ENST00000598895 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
ZNF548-209ENST00000598895 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
ZNF548-209ENST00000598895 H0YAA0 97 aa5.92□□□□□ -1.46
ZNF548-209ENST00000598895 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
ZNF548-209ENST00000598895 MT2AP02795 61 aa5.87□□□□□ -1.47
ZNF548-209ENST00000598895 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
ZNF548-209ENST00000598895 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
ZNF548-209ENST00000598895 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
ZNF548-209ENST00000598895 MT1FP04733 61 aa5.83□□□□□ -1.48
ZNF548-209ENST00000598895 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
ZNF548-209ENST00000598895 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
ZNF548-209ENST00000598895 S4R3F8 94 aa5.75□□□□□ -1.49
ZNF548-209ENST00000598895 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
ZNF548-209ENST00000598895 LCE2BO14633 110 aa5.7□□□□□ -1.5
ZNF548-209ENST00000598895 ROMO1P60602 79 aa5.7□□□□□ -1.5
ZNF548-209ENST00000598895 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
ZNF548-209ENST00000598895 USH2AO75445 5202 aa5.68□□□□□ -1.5
ZNF548-209ENST00000598895 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
ZNF548-209ENST00000598895 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
ZNF548-209ENST00000598895 A0A0D9SG42 100 aa5.57□□□□□ -1.52
ZNF548-209ENST00000598895 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
ZNF548-209ENST00000598895 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
ZNF548-209ENST00000598895 M0QZ58 72 aa5.54□□□□□ -1.52
ZNF548-209ENST00000598895 P0C880 135 aa5.53□□□□□ -1.52
ZNF548-209ENST00000598895 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
ZNF548-209ENST00000598895 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
ZNF548-209ENST00000598895 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
ZNF548-209ENST00000598895 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
ZNF548-209ENST00000598895 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
ZNF548-209ENST00000598895 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
ZNF548-209ENST00000598895 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
ZNF548-209ENST00000598895 H3BS24 57 aa5.4□□□□□ -1.54
ZNF548-209ENST00000598895 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.54
ZNF548-209ENST00000598895 MT1BP07438 61 aa5.37□□□□□ -1.55
ZNF548-209ENST00000598895 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
ZNF548-209ENST00000598895 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
ZNF548-209ENST00000598895 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
ZNF548-209ENST00000598895 R4GN34 69 aa5.32□□□□□ -1.56
ZNF548-209ENST00000598895 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
ZNF548-209ENST00000598895 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
ZNF548-209ENST00000598895 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
ZNF548-209ENST00000598895 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
ZNF548-209ENST00000598895 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
ZNF548-209ENST00000598895 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
ZNF548-209ENST00000598895 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
ZNF548-209ENST00000598895 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
ZNF548-209ENST00000598895 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
ZNF548-209ENST00000598895 MT1XP80297 61 aa5.06□□□□□ -1.6
ZNF548-209ENST00000598895 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
ZNF548-209ENST00000598895 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
ZNF548-209ENST00000598895 TNP1P09430 55 aa4.93□□□□□ -1.62
ZNF548-209ENST00000598895 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
ZNF548-209ENST00000598895 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
ZNF548-209ENST00000598895 KMT2DO14686 5537 aa4.87□□□□□ -1.63
ZNF548-209ENST00000598895 NEBP20929 6669 aa4.87□□□□□ -1.63
ZNF548-209ENST00000598895 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
ZNF548-209ENST00000598895 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
ZNF548-209ENST00000598895 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
ZNF548-209ENST00000598895 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
ZNF548-209ENST00000598895 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
ZNF548-209ENST00000598895 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
ZNF548-209ENST00000598895 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
ZNF548-209ENST00000598895 SPRR2EP22531 72 aa4.74□□□□□ -1.65
ZNF548-209ENST00000598895 SPRR2BP35325 72 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms