RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HRES1P13985 223 aa6.91□□□□□ -1.3
SCAF1-203ENST00000598359 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
SCAF1-203ENST00000598359 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
SCAF1-203ENST00000598359 FCGBPQ9Y6R7 5405 aaPredicted RBP6.91□□□□□ -1.3
SCAF1-203ENST00000598359 LOC101927531A0A1B0GV80 90 aa6.89□□□□□ -1.31
SCAF1-203ENST00000598359 Q5W150 140 aa6.89□□□□□ -1.31
SCAF1-203ENST00000598359 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
SCAF1-203ENST00000598359 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
SCAF1-203ENST00000598359 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
SCAF1-203ENST00000598359 MT2AP02795 61 aa6.82□□□□□ -1.32
SCAF1-203ENST00000598359 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
SCAF1-203ENST00000598359 SPINK7P58062 85 aa6.8□□□□□ -1.32
SCAF1-203ENST00000598359 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
SCAF1-203ENST00000598359 MT1FP04733 61 aa6.77□□□□□ -1.33
SCAF1-203ENST00000598359 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
SCAF1-203ENST00000598359 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
SCAF1-203ENST00000598359 LCE2BO14633 110 aa6.7□□□□□ -1.34
SCAF1-203ENST00000598359 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
SCAF1-203ENST00000598359 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
SCAF1-203ENST00000598359 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
SCAF1-203ENST00000598359 COA5Q86WW8 74 aa6.66□□□□□ -1.34
SCAF1-203ENST00000598359 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.34
SCAF1-203ENST00000598359 Q1T7F1 81 aa6.62□□□□□ -1.35
SCAF1-203ENST00000598359 ACYP2P14621 99 aa6.61□□□□□ -1.35
SCAF1-203ENST00000598359 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
SCAF1-203ENST00000598359 V9GYY9 64 aa6.58□□□□□ -1.36
SCAF1-203ENST00000598359 A8MUN3 132 aa6.56□□□□□ -1.36
SCAF1-203ENST00000598359 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
SCAF1-203ENST00000598359 KRTAP6-3Q3LI67 103 aa6.54□□□□□ -1.36
SCAF1-203ENST00000598359 NEBP20929 6669 aa6.5□□□□□ -1.37
SCAF1-203ENST00000598359 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
SCAF1-203ENST00000598359 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
SCAF1-203ENST00000598359 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
SCAF1-203ENST00000598359 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
SCAF1-203ENST00000598359 Q5VV11 94 aa6.42□□□□□ -1.38
SCAF1-203ENST00000598359 PSPHP1O15172 72 aa6.4□□□□□ -1.38
SCAF1-203ENST00000598359 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
SCAF1-203ENST00000598359 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
SCAF1-203ENST00000598359 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
SCAF1-203ENST00000598359 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
SCAF1-203ENST00000598359 S4R3F8 94 aa6.32□□□□□ -1.4
SCAF1-203ENST00000598359 LCA10Q71F78 164 aa6.29□□□□□ -1.4
SCAF1-203ENST00000598359 A0A1B0GU69 56 aa6.28□□□□□ -1.4
SCAF1-203ENST00000598359 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
SCAF1-203ENST00000598359 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
SCAF1-203ENST00000598359 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
SCAF1-203ENST00000598359 A6NED7 52 aa6.22□□□□□ -1.41
SCAF1-203ENST00000598359 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
SCAF1-203ENST00000598359 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
SCAF1-203ENST00000598359 MT1BP07438 61 aa6.19□□□□□ -1.42
SCAF1-203ENST00000598359 SEC61GP60059 68 aa6.18□□□□□ -1.42
SCAF1-203ENST00000598359 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
SCAF1-203ENST00000598359 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
SCAF1-203ENST00000598359 UQCR11O14957 56 aa6.14□□□□□ -1.43
SCAF1-203ENST00000598359 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
SCAF1-203ENST00000598359 A6NN06 94 aa6.12□□□□□ -1.43
SCAF1-203ENST00000598359 A8MU10 97 aa6.12□□□□□ -1.43
SCAF1-203ENST00000598359 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
SCAF1-203ENST00000598359 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SCAF1-203ENST00000598359 MDN1Q9NU22 5596 aa6.05□□□□□ -1.44
SCAF1-203ENST00000598359 A0A1B0GU33 70 aa6.04□□□□□ -1.44
SCAF1-203ENST00000598359 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
SCAF1-203ENST00000598359 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
SCAF1-203ENST00000598359 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
SCAF1-203ENST00000598359 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
SCAF1-203ENST00000598359 KMT2DO14686 5537 aa6.01□□□□□ -1.45
SCAF1-203ENST00000598359 H0YAA0 97 aa6.01□□□□□ -1.45
SCAF1-203ENST00000598359 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
SCAF1-203ENST00000598359 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
SCAF1-203ENST00000598359 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
SCAF1-203ENST00000598359 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
SCAF1-203ENST00000598359 P0C880 135 aa5.92□□□□□ -1.46
SCAF1-203ENST00000598359 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
SCAF1-203ENST00000598359 M0QZ58 72 aa5.83□□□□□ -1.48
SCAF1-203ENST00000598359 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
SCAF1-203ENST00000598359 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
SCAF1-203ENST00000598359 MT1XP80297 61 aa5.79□□□□□ -1.48
SCAF1-203ENST00000598359 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
SCAF1-203ENST00000598359 R4GN34 69 aa5.78□□□□□ -1.48
SCAF1-203ENST00000598359 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
SCAF1-203ENST00000598359 K7ERS5 55 aa5.75□□□□□ -1.49
SCAF1-203ENST00000598359 SPRR2EP22531 72 aa5.74□□□□□ -1.49
SCAF1-203ENST00000598359 SPRR2BP35325 72 aa5.74□□□□□ -1.49
SCAF1-203ENST00000598359 SPRR2AP35326 72 aa5.74□□□□□ -1.49
SCAF1-203ENST00000598359 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
SCAF1-203ENST00000598359 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
SCAF1-203ENST00000598359 A0A0D9SG42 100 aa5.7□□□□□ -1.5
SCAF1-203ENST00000598359 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
SCAF1-203ENST00000598359 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
SCAF1-203ENST00000598359 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
SCAF1-203ENST00000598359 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SCAF1-203ENST00000598359 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
SCAF1-203ENST00000598359 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SCAF1-203ENST00000598359 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SCAF1-203ENST00000598359 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
SCAF1-203ENST00000598359 ROMO1P60602 79 aa5.57□□□□□ -1.52
SCAF1-203ENST00000598359 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
SCAF1-203ENST00000598359 SPRR2DP22532 72 aa5.56□□□□□ -1.52
SCAF1-203ENST00000598359 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
SCAF1-203ENST00000598359 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms