RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 KRTAP19-6Q3LI70 58 aa10.38□□□□□ -0.75
IRF3-220ENST00000598108 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.37□□□□□ -0.75
IRF3-220ENST00000598108 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
IRF3-220ENST00000598108 MT-ATP8P03928 68 aa10.31□□□□□ -0.76
IRF3-220ENST00000598108 A8MUN3 132 aa10.3□□□□□ -0.76
IRF3-220ENST00000598108 H3BPC8 53 aa10.28□□□□□ -0.76
IRF3-220ENST00000598108 K7ERU9 68 aa10.28□□□□□ -0.76
IRF3-220ENST00000598108 NDUFC1O43677 76 aa10.28□□□□□ -0.76
IRF3-220ENST00000598108 IMUPQ9GZP8 106 aa10.27□□□□□ -0.77
IRF3-220ENST00000598108 SPRR2GQ9BYE4 73 aa10.26□□□□□ -0.77
IRF3-220ENST00000598108 MT1BP07438 61 aa10.19□□□□□ -0.78
IRF3-220ENST00000598108 MACF1Q9UPN3 7388 aaKnown RBP10.18□□□□□ -0.78
IRF3-220ENST00000598108 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
IRF3-220ENST00000598108 KRTAP9-7A8MTY7 169 aa10.17□□□□□ -0.78
IRF3-220ENST00000598108 H0YAA0 97 aa10.14□□□□□ -0.79
IRF3-220ENST00000598108 Q5VV11 94 aa10.13□□□□□ -0.79
IRF3-220ENST00000598108 DMAC1Q96GE9 116 aa10.11□□□□□ -0.79
IRF3-220ENST00000598108 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
IRF3-220ENST00000598108 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
IRF3-220ENST00000598108 ADM2Q7Z4H4 148 aa10.07□□□□□ -0.8
IRF3-220ENST00000598108 SMIM20Q8N5G0 67 aa10.06□□□□□ -0.8
IRF3-220ENST00000598108 SYNE2Q8WXH0 6885 aaKnown RBP10.03□□□□□ -0.8
IRF3-220ENST00000598108 A6NN06 94 aa9.95□□□□□ -0.82
IRF3-220ENST00000598108 P0C880 135 aa9.9□□□□□ -0.82
IRF3-220ENST00000598108 SNURFQ9Y675 71 aa9.9□□□□□ -0.82
IRF3-220ENST00000598108 KRTAP10-5P60370 271 aa9.89□□□□□ -0.83
IRF3-220ENST00000598108 ACYP2P14621 99 aa9.88□□□□□ -0.83
IRF3-220ENST00000598108 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
IRF3-220ENST00000598108 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
IRF3-220ENST00000598108 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
IRF3-220ENST00000598108 R4GN34 69 aa9.76□□□□□ -0.85
IRF3-220ENST00000598108 KRTAP6-3Q3LI67 103 aa9.74□□□□□ -0.85
IRF3-220ENST00000598108 M0QZ58 72 aa9.71□□□□□ -0.86
IRF3-220ENST00000598108 SPANXA2-OT1Q8N9U9 137 aa9.7□□□□□ -0.86
IRF3-220ENST00000598108 CHKB-CPT1BH3BT56 60 aa9.68□□□□□ -0.86
IRF3-220ENST00000598108 SPTSSBQ8NFR3 76 aa9.68□□□□□ -0.86
IRF3-220ENST00000598108 PLAC4Q8WY50 150 aa9.63□□□□□ -0.87
IRF3-220ENST00000598108 MT1XP80297 61 aa9.6□□□□□ -0.87
IRF3-220ENST00000598108 LINC01554Q52M75 96 aa9.58□□□□□ -0.88
IRF3-220ENST00000598108 COX7CP15954 63 aa9.55□□□□□ -0.88
IRF3-220ENST00000598108 PRO2289Q9P1D8 64 aa9.51□□□□□ -0.89
IRF3-220ENST00000598108 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
IRF3-220ENST00000598108 COA5Q86WW8 74 aa9.45□□□□□ -0.9
IRF3-220ENST00000598108 NEBP20929 6669 aa9.45□□□□□ -0.9
IRF3-220ENST00000598108 MUC12Q9UKN1 5478 aa9.42□□□□□ -0.9
IRF3-220ENST00000598108 H7BZZ5 65 aa9.4□□□□□ -0.9
IRF3-220ENST00000598108 KMT2DO14686 5537 aa9.38□□□□□ -0.91
IRF3-220ENST00000598108 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
IRF3-220ENST00000598108 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
IRF3-220ENST00000598108 ANAPC13Q9BS18 74 aa9.29□□□□□ -0.92
IRF3-220ENST00000598108 KRTAP12-2P59991 146 aa9.28□□□□□ -0.92
IRF3-220ENST00000598108 MDN1Q9NU22 5596 aa9.23□□□□□ -0.93
IRF3-220ENST00000598108 KRTAP10-7P60409 375 aaPredicted RBP9.17□□□□□ -0.94
IRF3-220ENST00000598108 CCDC179H3BU77 68 aa9.16□□□□□ -0.94
IRF3-220ENST00000598108 SEC61GP60059 68 aa9.16□□□□□ -0.94
IRF3-220ENST00000598108 SERP1Q9Y6X1 66 aa9.16□□□□□ -0.94
IRF3-220ENST00000598108 KRTAP4-8A0A0G2JLE6 195 aa9.15□□□□□ -0.94
IRF3-220ENST00000598108 KRTAP8-1Q8IUC2 63 aa9.15□□□□□ -0.94
IRF3-220ENST00000598108 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.94
IRF3-220ENST00000598108 SPRR2FQ96RM1 72 aa9.14□□□□□ -0.95
IRF3-220ENST00000598108 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
IRF3-220ENST00000598108 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
IRF3-220ENST00000598108 A0A1B0GU33 70 aa9.04□□□□□ -0.96
IRF3-220ENST00000598108 A0A0D9SG42 100 aa9.03□□□□□ -0.96
IRF3-220ENST00000598108 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
IRF3-220ENST00000598108 SPRR2EP22531 72 aa8.96□□□□□ -0.98
IRF3-220ENST00000598108 SPRR2BP35325 72 aa8.96□□□□□ -0.98
IRF3-220ENST00000598108 SPRR2AP35326 72 aa8.96□□□□□ -0.98
IRF3-220ENST00000598108 A0A1B0GU69 56 aa8.93□□□□□ -0.98
IRF3-220ENST00000598108 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
IRF3-220ENST00000598108 LCE1AQ5T7P2 110 aa8.9□□□□□ -0.98
IRF3-220ENST00000598108 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
IRF3-220ENST00000598108 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
IRF3-220ENST00000598108 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
IRF3-220ENST00000598108 A8MU10 97 aa8.77□□□□□ -1.01
IRF3-220ENST00000598108 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
IRF3-220ENST00000598108 KRTAP2-3P0C7H8 128 aa8.75□□□□□ -1.01
IRF3-220ENST00000598108 KRTAP2-4Q9BYR9 128 aa8.75□□□□□ -1.01
IRF3-220ENST00000598108 TMEM258P61165 79 aa8.74□□□□□ -1.01
IRF3-220ENST00000598108 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
IRF3-220ENST00000598108 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
IRF3-220ENST00000598108 SPRR2DP22532 72 aa8.65□□□□□ -1.02
IRF3-220ENST00000598108 KRTAP19-7Q3SYF9 63 aa8.58□□□□□ -1.04
IRF3-220ENST00000598108 MT1EP04732 61 aa8.49□□□□□ -1.05
IRF3-220ENST00000598108 KRTAP2-2Q9BYT5 123 aa8.48□□□□□ -1.05
IRF3-220ENST00000598108 KRTAP2-1Q9BYU5 128 aa8.48□□□□□ -1.05
IRF3-220ENST00000598108 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
IRF3-220ENST00000598108 UQCR11O14957 56 aa8.42□□□□□ -1.06
IRF3-220ENST00000598108 KRTAP19-5Q3LI72 72 aa8.41□□□□□ -1.06
IRF3-220ENST00000598108 LCE3BQ5TA77 95 aa8.4□□□□□ -1.06
IRF3-220ENST00000598108 LCE5AQ5TCM9 118 aa8.37□□□□□ -1.07
IRF3-220ENST00000598108 TNP1P09430 55 aa8.35□□□□□ -1.07
IRF3-220ENST00000598108 KRTAP19-3Q7Z4W3 81 aa8.35□□□□□ -1.07
IRF3-220ENST00000598108 LCE3AQ5TA76 89 aa8.3□□□□□ -1.08
IRF3-220ENST00000598108 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
IRF3-220ENST00000598108 PSPHP1O15172 72 aa8.24□□□□□ -1.09
IRF3-220ENST00000598108 Q1T7F1 81 aa8.22□□□□□ -1.09
IRF3-220ENST00000598108 V9GYY9 64 aa8.22□□□□□ -1.09
IRF3-220ENST00000598108 DSTQ03001 7570 aaKnown RBP8.21□□□□□ -1.09
IRF3-220ENST00000598108 MT1GP13640 62 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms