RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SCGB1A1P11684 91 aa7.64□□□□□ -1.19
SSBP4-204ENST00000597724 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
SSBP4-204ENST00000597724 A8MUN3 132 aa7.62□□□□□ -1.19
SSBP4-204ENST00000597724 H3BPC8 53 aa7.62□□□□□ -1.19
SSBP4-204ENST00000597724 KRTAP19-6Q3LI70 58 aa7.62□□□□□ -1.19
SSBP4-204ENST00000597724 IMUPQ9GZP8 106 aa7.62□□□□□ -1.19
SSBP4-204ENST00000597724 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
SSBP4-204ENST00000597724 NDUFC1O43677 76 aa7.58□□□□□ -1.2
SSBP4-204ENST00000597724 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
SSBP4-204ENST00000597724 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
SSBP4-204ENST00000597724 H0YAA0 97 aa7.5□□□□□ -1.21
SSBP4-204ENST00000597724 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
SSBP4-204ENST00000597724 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
SSBP4-204ENST00000597724 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
SSBP4-204ENST00000597724 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.22
SSBP4-204ENST00000597724 MT1BP07438 61 aa7.46□□□□□ -1.22
SSBP4-204ENST00000597724 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
SSBP4-204ENST00000597724 Q5VV11 94 aa7.45□□□□□ -1.22
SSBP4-204ENST00000597724 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
SSBP4-204ENST00000597724 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
SSBP4-204ENST00000597724 ACYP2P14621 99 aa7.31□□□□□ -1.24
SSBP4-204ENST00000597724 A6NN06 94 aa7.3□□□□□ -1.24
SSBP4-204ENST00000597724 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
SSBP4-204ENST00000597724 P0C880 135 aa7.26□□□□□ -1.25
SSBP4-204ENST00000597724 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
SSBP4-204ENST00000597724 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
SSBP4-204ENST00000597724 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
SSBP4-204ENST00000597724 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
SSBP4-204ENST00000597724 R4GN34 69 aa7.2□□□□□ -1.26
SSBP4-204ENST00000597724 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
SSBP4-204ENST00000597724 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
SSBP4-204ENST00000597724 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
SSBP4-204ENST00000597724 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
SSBP4-204ENST00000597724 M0QZ58 72 aa7.15□□□□□ -1.26
SSBP4-204ENST00000597724 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
SSBP4-204ENST00000597724 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
SSBP4-204ENST00000597724 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
SSBP4-204ENST00000597724 COX7CP15954 63 aa7.07□□□□□ -1.28
SSBP4-204ENST00000597724 MT1XP80297 61 aa7.03□□□□□ -1.28
SSBP4-204ENST00000597724 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
SSBP4-204ENST00000597724 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
SSBP4-204ENST00000597724 COA5Q86WW8 74 aa6.97□□□□□ -1.29
SSBP4-204ENST00000597724 H7BZZ5 65 aa6.94□□□□□ -1.3
SSBP4-204ENST00000597724 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
SSBP4-204ENST00000597724 KRTAP5-9P26371 169 aa6.88□□□□□ -1.31
SSBP4-204ENST00000597724 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
SSBP4-204ENST00000597724 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
SSBP4-204ENST00000597724 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
SSBP4-204ENST00000597724 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
SSBP4-204ENST00000597724 SEC61GP60059 68 aa6.79□□□□□ -1.32
SSBP4-204ENST00000597724 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
SSBP4-204ENST00000597724 KMT2DO14686 5537 aa6.78□□□□□ -1.32
SSBP4-204ENST00000597724 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
SSBP4-204ENST00000597724 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
SSBP4-204ENST00000597724 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
SSBP4-204ENST00000597724 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
SSBP4-204ENST00000597724 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
SSBP4-204ENST00000597724 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
SSBP4-204ENST00000597724 A0A1B0GU33 70 aa6.68□□□□□ -1.34
SSBP4-204ENST00000597724 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
SSBP4-204ENST00000597724 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
SSBP4-204ENST00000597724 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
SSBP4-204ENST00000597724 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
SSBP4-204ENST00000597724 A0A0D9SG42 100 aa6.63□□□□□ -1.35
SSBP4-204ENST00000597724 NEBP20929 6669 aa6.63□□□□□ -1.35
SSBP4-204ENST00000597724 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
SSBP4-204ENST00000597724 A0A1B0GU69 56 aa6.6□□□□□ -1.35
SSBP4-204ENST00000597724 SPRR2EP22531 72 aa6.55□□□□□ -1.36
SSBP4-204ENST00000597724 SPRR2BP35325 72 aa6.55□□□□□ -1.36
SSBP4-204ENST00000597724 SPRR2AP35326 72 aa6.55□□□□□ -1.36
SSBP4-204ENST00000597724 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
SSBP4-204ENST00000597724 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
SSBP4-204ENST00000597724 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
SSBP4-204ENST00000597724 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
SSBP4-204ENST00000597724 TMEM258P61165 79 aa6.5□□□□□ -1.37
SSBP4-204ENST00000597724 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
SSBP4-204ENST00000597724 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
SSBP4-204ENST00000597724 A8MU10 97 aa6.43□□□□□ -1.38
SSBP4-204ENST00000597724 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
SSBP4-204ENST00000597724 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
SSBP4-204ENST00000597724 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
SSBP4-204ENST00000597724 SPRR2DP22532 72 aa6.34□□□□□ -1.39
SSBP4-204ENST00000597724 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
SSBP4-204ENST00000597724 UQCR11O14957 56 aa6.25□□□□□ -1.41
SSBP4-204ENST00000597724 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
SSBP4-204ENST00000597724 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
SSBP4-204ENST00000597724 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SSBP4-204ENST00000597724 MT1EP04732 61 aa6.21□□□□□ -1.42
SSBP4-204ENST00000597724 TNP1P09430 55 aa6.16□□□□□ -1.42
SSBP4-204ENST00000597724 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
SSBP4-204ENST00000597724 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
SSBP4-204ENST00000597724 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
SSBP4-204ENST00000597724 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
SSBP4-204ENST00000597724 V9GYY9 64 aa6.12□□□□□ -1.43
SSBP4-204ENST00000597724 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
SSBP4-204ENST00000597724 Q1T7F1 81 aa6.1□□□□□ -1.43
SSBP4-204ENST00000597724 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
SSBP4-204ENST00000597724 PSPHP1O15172 72 aa6.07□□□□□ -1.44
SSBP4-204ENST00000597724 MT1GP13640 62 aa6.01□□□□□ -1.45
SSBP4-204ENST00000597724 MT1LQ93083 61 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms