RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SMIM20Q8N5G0 67 aa7.91□□□□□ -1.14
SHKBP1-215ENST00000597649 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
SHKBP1-215ENST00000597649 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
SHKBP1-215ENST00000597649 CYP4F30PQ9H0H9 118 aa7.89□□□□□ -1.15
SHKBP1-215ENST00000597649 LINC00208Q96KT6 92 aa7.88□□□□□ -1.15
SHKBP1-215ENST00000597649 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
SHKBP1-215ENST00000597649 C4orf26Q17RF5 130 aa7.85□□□□□ -1.15
SHKBP1-215ENST00000597649 H3BPC8 53 aa7.84□□□□□ -1.15
SHKBP1-215ENST00000597649 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
SHKBP1-215ENST00000597649 ANAPC13Q9BS18 74 aa7.77□□□□□ -1.17
SHKBP1-215ENST00000597649 SERP2Q8N6R1 65 aa7.75□□□□□ -1.17
SHKBP1-215ENST00000597649 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
SHKBP1-215ENST00000597649 PCP4P48539 62 aa7.72□□□□□ -1.17
SHKBP1-215ENST00000597649 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
SHKBP1-215ENST00000597649 KRTAP3-1Q9BYR8 98 aa7.68□□□□□ -1.18
SHKBP1-215ENST00000597649 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
SHKBP1-215ENST00000597649 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
SHKBP1-215ENST00000597649 COX7CP15954 63 aa7.63□□□□□ -1.19
SHKBP1-215ENST00000597649 S4R3F8 94 aa7.63□□□□□ -1.19
SHKBP1-215ENST00000597649 A8MUN3 132 aa7.62□□□□□ -1.19
SHKBP1-215ENST00000597649 KMT2DO14686 5537 aa7.6□□□□□ -1.19
SHKBP1-215ENST00000597649 KRTAP20-1Q3LI63 56 aa7.59□□□□□ -1.19
SHKBP1-215ENST00000597649 LCA10Q71F78 164 aa7.55□□□□□ -1.2
SHKBP1-215ENST00000597649 CCDC179H3BU77 68 aa7.54□□□□□ -1.2
SHKBP1-215ENST00000597649 A6NN06 94 aa7.53□□□□□ -1.2
SHKBP1-215ENST00000597649 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
SHKBP1-215ENST00000597649 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
SHKBP1-215ENST00000597649 MT1BP07438 61 aa7.5□□□□□ -1.21
SHKBP1-215ENST00000597649 NDUFC1O43677 76 aa7.49□□□□□ -1.21
SHKBP1-215ENST00000597649 ACYP2P14621 99 aa7.48□□□□□ -1.21
SHKBP1-215ENST00000597649 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
SHKBP1-215ENST00000597649 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
SHKBP1-215ENST00000597649 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
SHKBP1-215ENST00000597649 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
SHKBP1-215ENST00000597649 Q5VV11 94 aa7.4□□□□□ -1.22
SHKBP1-215ENST00000597649 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
SHKBP1-215ENST00000597649 CHKB-CPT1BH3BT56 60 aa7.38□□□□□ -1.23
SHKBP1-215ENST00000597649 H7BZZ5 65 aa7.38□□□□□ -1.23
SHKBP1-215ENST00000597649 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
SHKBP1-215ENST00000597649 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
SHKBP1-215ENST00000597649 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
SHKBP1-215ENST00000597649 TMEM258P61165 79 aa7.32□□□□□ -1.24
SHKBP1-215ENST00000597649 KRTAP2-3P0C7H8 128 aa7.29□□□□□ -1.24
SHKBP1-215ENST00000597649 KRTAP2-4Q9BYR9 128 aa7.29□□□□□ -1.24
SHKBP1-215ENST00000597649 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
SHKBP1-215ENST00000597649 COA5Q86WW8 74 aa7.25□□□□□ -1.25
SHKBP1-215ENST00000597649 H0YAA0 97 aa7.24□□□□□ -1.25
SHKBP1-215ENST00000597649 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
SHKBP1-215ENST00000597649 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
SHKBP1-215ENST00000597649 SPRR2EP22531 72 aa7.1□□□□□ -1.27
SHKBP1-215ENST00000597649 SPRR2BP35325 72 aa7.1□□□□□ -1.27
SHKBP1-215ENST00000597649 SPRR2AP35326 72 aa7.1□□□□□ -1.27
SHKBP1-215ENST00000597649 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
SHKBP1-215ENST00000597649 P0C880 135 aa7.08□□□□□ -1.28
SHKBP1-215ENST00000597649 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
SHKBP1-215ENST00000597649 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
SHKBP1-215ENST00000597649 SEC61GP60059 68 aa7.04□□□□□ -1.28
SHKBP1-215ENST00000597649 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
SHKBP1-215ENST00000597649 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
SHKBP1-215ENST00000597649 R4GN34 69 aa7.02□□□□□ -1.29
SHKBP1-215ENST00000597649 M0QZ58 72 aa6.99□□□□□ -1.29
SHKBP1-215ENST00000597649 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
SHKBP1-215ENST00000597649 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
SHKBP1-215ENST00000597649 MT1XP80297 61 aa6.92□□□□□ -1.3
SHKBP1-215ENST00000597649 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
SHKBP1-215ENST00000597649 A0A1B0GU69 56 aa6.91□□□□□ -1.3
SHKBP1-215ENST00000597649 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
SHKBP1-215ENST00000597649 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
SHKBP1-215ENST00000597649 SPRR2DP22532 72 aa6.86□□□□□ -1.31
SHKBP1-215ENST00000597649 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
SHKBP1-215ENST00000597649 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
SHKBP1-215ENST00000597649 GPR98Q8WXG9 6306 aa6.83□□□□□ -1.32
SHKBP1-215ENST00000597649 A0A1B0GU33 70 aa6.83□□□□□ -1.32
SHKBP1-215ENST00000597649 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
SHKBP1-215ENST00000597649 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
SHKBP1-215ENST00000597649 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
SHKBP1-215ENST00000597649 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
SHKBP1-215ENST00000597649 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
SHKBP1-215ENST00000597649 V9GYY9 64 aa6.77□□□□□ -1.33
SHKBP1-215ENST00000597649 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
SHKBP1-215ENST00000597649 Q1T7F1 81 aa6.73□□□□□ -1.33
SHKBP1-215ENST00000597649 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
SHKBP1-215ENST00000597649 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
SHKBP1-215ENST00000597649 A0A0D9SG42 100 aa6.68□□□□□ -1.34
SHKBP1-215ENST00000597649 PSPHP1O15172 72 aa6.63□□□□□ -1.35
SHKBP1-215ENST00000597649 UQCR11O14957 56 aa6.61□□□□□ -1.35
SHKBP1-215ENST00000597649 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
SHKBP1-215ENST00000597649 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
SHKBP1-215ENST00000597649 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
SHKBP1-215ENST00000597649 A8MU10 97 aa6.55□□□□□ -1.36
SHKBP1-215ENST00000597649 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
SHKBP1-215ENST00000597649 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
SHKBP1-215ENST00000597649 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
SHKBP1-215ENST00000597649 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
SHKBP1-215ENST00000597649 A6NED7 52 aa6.47□□□□□ -1.37
SHKBP1-215ENST00000597649 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
SHKBP1-215ENST00000597649 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
SHKBP1-215ENST00000597649 K7ERS5 55 aa6.35□□□□□ -1.39
SHKBP1-215ENST00000597649 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
SHKBP1-215ENST00000597649 HMCN1Q96RW7 5635 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms