RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 S4R3F8 94 aa7.49□□□□□ -1.21
GTF2F1-202ENST00000593678 Q1T7F1 81 aa7.48□□□□□ -1.21
GTF2F1-202ENST00000593678 LCA10Q71F78 164 aa7.44□□□□□ -1.22
GTF2F1-202ENST00000593678 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
GTF2F1-202ENST00000593678 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
GTF2F1-202ENST00000593678 MUC2Q02817 5179 aa7.39□□□□□ -1.23
GTF2F1-202ENST00000593678 SEC61GP60059 68 aa7.38□□□□□ -1.23
GTF2F1-202ENST00000593678 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
GTF2F1-202ENST00000593678 PSPHP1O15172 72 aa7.37□□□□□ -1.23
GTF2F1-202ENST00000593678 A0A1B0GU69 56 aa7.36□□□□□ -1.23
GTF2F1-202ENST00000593678 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
GTF2F1-202ENST00000593678 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
GTF2F1-202ENST00000593678 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
GTF2F1-202ENST00000593678 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
GTF2F1-202ENST00000593678 Q5VV11 94 aa7.25□□□□□ -1.25
GTF2F1-202ENST00000593678 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
GTF2F1-202ENST00000593678 A6NED7 52 aa7.18□□□□□ -1.26
GTF2F1-202ENST00000593678 LCE2CQ5TA81 110 aa7.15□□□□□ -1.27
GTF2F1-202ENST00000593678 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.27
GTF2F1-202ENST00000593678 UQCR11O14957 56 aa7.14□□□□□ -1.27
GTF2F1-202ENST00000593678 H0YAA0 97 aa7.13□□□□□ -1.27
GTF2F1-202ENST00000593678 M0R2T5 61 aa7.13□□□□□ -1.27
GTF2F1-202ENST00000593678 A0A1B0GU33 70 aa7.12□□□□□ -1.27
GTF2F1-202ENST00000593678 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
GTF2F1-202ENST00000593678 KRTAP10-6P60371 365 aaPredicted RBP7.07□□□□□ -1.28
GTF2F1-202ENST00000593678 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
GTF2F1-202ENST00000593678 MT1HP80294 61 aa7.06□□□□□ -1.28
GTF2F1-202ENST00000593678 P0C880 135 aa7.05□□□□□ -1.28
GTF2F1-202ENST00000593678 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
GTF2F1-202ENST00000593678 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
GTF2F1-202ENST00000593678 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
GTF2F1-202ENST00000593678 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
GTF2F1-202ENST00000593678 M0QZ58 72 aa6.94□□□□□ -1.3
GTF2F1-202ENST00000593678 R4GN34 69 aa6.94□□□□□ -1.3
GTF2F1-202ENST00000593678 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
GTF2F1-202ENST00000593678 A8MU10 97 aa6.88□□□□□ -1.31
GTF2F1-202ENST00000593678 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
GTF2F1-202ENST00000593678 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
GTF2F1-202ENST00000593678 A0A0D9SG42 100 aa6.85□□□□□ -1.31
GTF2F1-202ENST00000593678 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
GTF2F1-202ENST00000593678 K7ERS5 55 aa6.81□□□□□ -1.32
GTF2F1-202ENST00000593678 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
GTF2F1-202ENST00000593678 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
GTF2F1-202ENST00000593678 MT2AP02795 61 aa6.77□□□□□ -1.33
GTF2F1-202ENST00000593678 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
GTF2F1-202ENST00000593678 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
GTF2F1-202ENST00000593678 MT1FP04733 61 aa6.73□□□□□ -1.33
GTF2F1-202ENST00000593678 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
GTF2F1-202ENST00000593678 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
GTF2F1-202ENST00000593678 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
GTF2F1-202ENST00000593678 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
GTF2F1-202ENST00000593678 A6NN06 94 aa6.64□□□□□ -1.35
GTF2F1-202ENST00000593678 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
GTF2F1-202ENST00000593678 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
GTF2F1-202ENST00000593678 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
GTF2F1-202ENST00000593678 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
GTF2F1-202ENST00000593678 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
GTF2F1-202ENST00000593678 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
GTF2F1-202ENST00000593678 ROMO1P60602 79 aa6.44□□□□□ -1.38
GTF2F1-202ENST00000593678 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
GTF2F1-202ENST00000593678 MT1BP07438 61 aa6.34□□□□□ -1.39
GTF2F1-202ENST00000593678 LCE2BO14633 110 aa6.33□□□□□ -1.4
GTF2F1-202ENST00000593678 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
GTF2F1-202ENST00000593678 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
GTF2F1-202ENST00000593678 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
GTF2F1-202ENST00000593678 USH2AO75445 5202 aa6.21□□□□□ -1.42
GTF2F1-202ENST00000593678 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
GTF2F1-202ENST00000593678 TNP1P09430 55 aa6.18□□□□□ -1.42
GTF2F1-202ENST00000593678 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
GTF2F1-202ENST00000593678 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
GTF2F1-202ENST00000593678 MT1XP80297 61 aa6.15□□□□□ -1.42
GTF2F1-202ENST00000593678 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
GTF2F1-202ENST00000593678 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
GTF2F1-202ENST00000593678 PP632Q6XCG6 107 aa6□□□□□ -1.45
GTF2F1-202ENST00000593678 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
GTF2F1-202ENST00000593678 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
GTF2F1-202ENST00000593678 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
GTF2F1-202ENST00000593678 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
GTF2F1-202ENST00000593678 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
GTF2F1-202ENST00000593678 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
GTF2F1-202ENST00000593678 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
GTF2F1-202ENST00000593678 H3BS24 57 aa5.77□□□□□ -1.49
GTF2F1-202ENST00000593678 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
GTF2F1-202ENST00000593678 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
GTF2F1-202ENST00000593678 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
GTF2F1-202ENST00000593678 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
GTF2F1-202ENST00000593678 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
GTF2F1-202ENST00000593678 KMT2DO14686 5537 aa5.66□□□□□ -1.5
GTF2F1-202ENST00000593678 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
GTF2F1-202ENST00000593678 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
GTF2F1-202ENST00000593678 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
GTF2F1-202ENST00000593678 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
GTF2F1-202ENST00000593678 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
GTF2F1-202ENST00000593678 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
GTF2F1-202ENST00000593678 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
GTF2F1-202ENST00000593678 MT1EP04732 61 aa5.4□□□□□ -1.54
GTF2F1-202ENST00000593678 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
GTF2F1-202ENST00000593678 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
GTF2F1-202ENST00000593678 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
GTF2F1-202ENST00000593678 MT1LQ93083 61 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms