RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
APOC1-208ENST00000592535 H3BPC8 53 aa6.4□□□□□ -1.38
APOC1-208ENST00000592535 COX7CP15954 63 aa6.4□□□□□ -1.38
APOC1-208ENST00000592535 S4R3F8 94 aa6.4□□□□□ -1.38
APOC1-208ENST00000592535 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
APOC1-208ENST00000592535 MP68P56378 58 aa6.38□□□□□ -1.39
APOC1-208ENST00000592535 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
APOC1-208ENST00000592535 LCA10Q71F78 164 aa6.37□□□□□ -1.39
APOC1-208ENST00000592535 LINC00208Q96KT6 92 aa6.37□□□□□ -1.39
APOC1-208ENST00000592535 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
APOC1-208ENST00000592535 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
APOC1-208ENST00000592535 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
APOC1-208ENST00000592535 C20orf197Q8N268 126 aa6.32□□□□□ -1.4
APOC1-208ENST00000592535 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
APOC1-208ENST00000592535 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
APOC1-208ENST00000592535 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
APOC1-208ENST00000592535 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
APOC1-208ENST00000592535 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
APOC1-208ENST00000592535 MT1BP07438 61 aa6.24□□□□□ -1.41
APOC1-208ENST00000592535 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
APOC1-208ENST00000592535 PCP4P48539 62 aa6.22□□□□□ -1.41
APOC1-208ENST00000592535 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
APOC1-208ENST00000592535 NDUFC1O43677 76 aa6.21□□□□□ -1.42
APOC1-208ENST00000592535 Q5VV11 94 aa6.21□□□□□ -1.42
APOC1-208ENST00000592535 H7BZZ5 65 aa6.2□□□□□ -1.42
APOC1-208ENST00000592535 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
APOC1-208ENST00000592535 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
APOC1-208ENST00000592535 A6NN06 94 aa6.16□□□□□ -1.42
APOC1-208ENST00000592535 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
APOC1-208ENST00000592535 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
APOC1-208ENST00000592535 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
APOC1-208ENST00000592535 A8MUN3 132 aa6.1□□□□□ -1.43
APOC1-208ENST00000592535 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
APOC1-208ENST00000592535 H0YAA0 97 aa6.07□□□□□ -1.44
APOC1-208ENST00000592535 TMEM258P61165 79 aa6.05□□□□□ -1.44
APOC1-208ENST00000592535 ACYP2P14621 99 aa6.04□□□□□ -1.44
APOC1-208ENST00000592535 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
APOC1-208ENST00000592535 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
APOC1-208ENST00000592535 COA5Q86WW8 74 aa5.94□□□□□ -1.46
APOC1-208ENST00000592535 P0C880 135 aa5.9□□□□□ -1.46
APOC1-208ENST00000592535 SERP1Q9Y6X1 66 aa5.88□□□□□ -1.47
APOC1-208ENST00000592535 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
APOC1-208ENST00000592535 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
APOC1-208ENST00000592535 R4GN34 69 aa5.86□□□□□ -1.47
APOC1-208ENST00000592535 NEBP20929 6669 aa5.85□□□□□ -1.47
APOC1-208ENST00000592535 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
APOC1-208ENST00000592535 MT1XP80297 61 aa5.84□□□□□ -1.47
APOC1-208ENST00000592535 M0QZ58 72 aa5.83□□□□□ -1.48
APOC1-208ENST00000592535 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
APOC1-208ENST00000592535 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
APOC1-208ENST00000592535 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
APOC1-208ENST00000592535 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
APOC1-208ENST00000592535 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
APOC1-208ENST00000592535 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
APOC1-208ENST00000592535 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
APOC1-208ENST00000592535 KMT2DO14686 5537 aa5.72□□□□□ -1.49
APOC1-208ENST00000592535 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
APOC1-208ENST00000592535 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
APOC1-208ENST00000592535 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
APOC1-208ENST00000592535 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
APOC1-208ENST00000592535 Q1T7F1 81 aa5.66□□□□□ -1.5
APOC1-208ENST00000592535 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
APOC1-208ENST00000592535 SPRR2EP22531 72 aa5.62□□□□□ -1.51
APOC1-208ENST00000592535 SPRR2BP35325 72 aa5.62□□□□□ -1.51
APOC1-208ENST00000592535 SPRR2AP35326 72 aa5.62□□□□□ -1.51
APOC1-208ENST00000592535 V9GYY9 64 aa5.62□□□□□ -1.51
APOC1-208ENST00000592535 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
APOC1-208ENST00000592535 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
APOC1-208ENST00000592535 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
APOC1-208ENST00000592535 SEC61GP60059 68 aa5.6□□□□□ -1.51
APOC1-208ENST00000592535 A0A1B0GU69 56 aa5.59□□□□□ -1.51
APOC1-208ENST00000592535 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
APOC1-208ENST00000592535 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
APOC1-208ENST00000592535 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
APOC1-208ENST00000592535 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
APOC1-208ENST00000592535 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
APOC1-208ENST00000592535 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
APOC1-208ENST00000592535 A0A1B0GU33 70 aa5.52□□□□□ -1.53
APOC1-208ENST00000592535 PSPHP1O15172 72 aa5.5□□□□□ -1.53
APOC1-208ENST00000592535 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
APOC1-208ENST00000592535 SPRR2DP22532 72 aa5.43□□□□□ -1.54
APOC1-208ENST00000592535 UQCR11O14957 56 aa5.42□□□□□ -1.54
APOC1-208ENST00000592535 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
APOC1-208ENST00000592535 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
APOC1-208ENST00000592535 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
APOC1-208ENST00000592535 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
APOC1-208ENST00000592535 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
APOC1-208ENST00000592535 A0A0D9SG42 100 aa5.32□□□□□ -1.56
APOC1-208ENST00000592535 A6NED7 52 aa5.32□□□□□ -1.56
APOC1-208ENST00000592535 A8MU10 97 aa5.32□□□□□ -1.56
APOC1-208ENST00000592535 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
APOC1-208ENST00000592535 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
APOC1-208ENST00000592535 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
APOC1-208ENST00000592535 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
APOC1-208ENST00000592535 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
APOC1-208ENST00000592535 MT1EP04732 61 aa5.18□□□□□ -1.58
APOC1-208ENST00000592535 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
APOC1-208ENST00000592535 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
APOC1-208ENST00000592535 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
APOC1-208ENST00000592535 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms