RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 LCA10Q71F78 164 aa5.78□□□□□ -1.48
SMAD4-214ENST00000592186 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
SMAD4-214ENST00000592186 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
SMAD4-214ENST00000592186 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
SMAD4-214ENST00000592186 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
SMAD4-214ENST00000592186 A8MUU9 505 aa5.76□□□□□ -1.49
SMAD4-214ENST00000592186 RPL37P61927 97 aaKnown RBP5.76□□□□□ -1.49
SMAD4-214ENST00000592186 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
SMAD4-214ENST00000592186 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
SMAD4-214ENST00000592186 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
SMAD4-214ENST00000592186 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
SMAD4-214ENST00000592186 LRP2P98164 4655 aa5.74□□□□□ -1.49
SMAD4-214ENST00000592186 A6NED7 52 aa5.74□□□□□ -1.49
SMAD4-214ENST00000592186 LPAP08519 4548 aa5.73□□□□□ -1.49
SMAD4-214ENST00000592186 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
SMAD4-214ENST00000592186 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
SMAD4-214ENST00000592186 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
SMAD4-214ENST00000592186 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
SMAD4-214ENST00000592186 H0Y9P7 68 aa5.69□□□□□ -1.5
SMAD4-214ENST00000592186 PCOTHQ58A44 107 aa5.69□□□□□ -1.5
SMAD4-214ENST00000592186 COA5Q86WW8 74 aa5.68□□□□□ -1.5
SMAD4-214ENST00000592186 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
SMAD4-214ENST00000592186 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
SMAD4-214ENST00000592186 A8MU10 97 aa5.65□□□□□ -1.51
SMAD4-214ENST00000592186 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
SMAD4-214ENST00000592186 Q5W150 140 aa5.57□□□□□ -1.52
SMAD4-214ENST00000592186 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
SMAD4-214ENST00000592186 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
SMAD4-214ENST00000592186 SPINK7P58062 85 aa5.55□□□□□ -1.52
SMAD4-214ENST00000592186 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
SMAD4-214ENST00000592186 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
SMAD4-214ENST00000592186 RNF213Q63HN8 5207 aa5.5□□□□□ -1.53
SMAD4-214ENST00000592186 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
SMAD4-214ENST00000592186 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
SMAD4-214ENST00000592186 MUC2Q02817 5179 aa5.48□□□□□ -1.53
SMAD4-214ENST00000592186 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
SMAD4-214ENST00000592186 HRES1P13985 223 aa5.46□□□□□ -1.54
SMAD4-214ENST00000592186 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
SMAD4-214ENST00000592186 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
SMAD4-214ENST00000592186 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
SMAD4-214ENST00000592186 ACYP2P14621 99 aa5.4□□□□□ -1.55
SMAD4-214ENST00000592186 PRAC1Q96KF2 57 aa5.4□□□□□ -1.55
SMAD4-214ENST00000592186 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
SMAD4-214ENST00000592186 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SMAD4-214ENST00000592186 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
SMAD4-214ENST00000592186 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
SMAD4-214ENST00000592186 UQCR11O14957 56 aa5.35□□□□□ -1.55
SMAD4-214ENST00000592186 A0A1B0GU69 56 aa5.34□□□□□ -1.55
SMAD4-214ENST00000592186 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
SMAD4-214ENST00000592186 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
SMAD4-214ENST00000592186 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
SMAD4-214ENST00000592186 MT1HP80294 61 aa5.29□□□□□ -1.56
SMAD4-214ENST00000592186 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
SMAD4-214ENST00000592186 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
SMAD4-214ENST00000592186 M0R2T5 61 aa5.26□□□□□ -1.57
SMAD4-214ENST00000592186 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
SMAD4-214ENST00000592186 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
SMAD4-214ENST00000592186 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
SMAD4-214ENST00000592186 S4R3F8 94 aa5.22□□□□□ -1.57
SMAD4-214ENST00000592186 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
SMAD4-214ENST00000592186 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SMAD4-214ENST00000592186 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
SMAD4-214ENST00000592186 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-214ENST00000592186 ROMO1P60602 79 aa5.18□□□□□ -1.58
SMAD4-214ENST00000592186 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-214ENST00000592186 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
SMAD4-214ENST00000592186 K7ERS5 55 aa5.02□□□□□ -1.61
SMAD4-214ENST00000592186 H0YAA0 97 aa5.01□□□□□ -1.61
SMAD4-214ENST00000592186 MT2AP02795 61 aa5.01□□□□□ -1.61
SMAD4-214ENST00000592186 KRTAP10-10P60014 251 aa5□□□□□ -1.61
SMAD4-214ENST00000592186 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SMAD4-214ENST00000592186 MT1FP04733 61 aa4.97□□□□□ -1.61
SMAD4-214ENST00000592186 A0A1B0GU33 70 aa4.93□□□□□ -1.62
SMAD4-214ENST00000592186 P0C880 135 aa4.93□□□□□ -1.62
SMAD4-214ENST00000592186 CRIPTQ9P021 101 aa4.93□□□□□ -1.62
SMAD4-214ENST00000592186 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
SMAD4-214ENST00000592186 SPINT4Q6UDR6 99 aa4.82□□□□□ -1.64
SMAD4-214ENST00000592186 R4GN34 69 aa4.81□□□□□ -1.64
SMAD4-214ENST00000592186 M0QZ58 72 aa4.79□□□□□ -1.64
SMAD4-214ENST00000592186 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SMAD4-214ENST00000592186 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
SMAD4-214ENST00000592186 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
SMAD4-214ENST00000592186 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
SMAD4-214ENST00000592186 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
SMAD4-214ENST00000592186 MT1BP07438 61 aa4.65□□□□□ -1.67
SMAD4-214ENST00000592186 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
SMAD4-214ENST00000592186 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
SMAD4-214ENST00000592186 USH2AO75445 5202 aa4.64□□□□□ -1.67
SMAD4-214ENST00000592186 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SMAD4-214ENST00000592186 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
SMAD4-214ENST00000592186 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
SMAD4-214ENST00000592186 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SMAD4-214ENST00000592186 A0A0D9SG42 100 aa4.56□□□□□ -1.68
SMAD4-214ENST00000592186 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
SMAD4-214ENST00000592186 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SMAD4-214ENST00000592186 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
SMAD4-214ENST00000592186 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SMAD4-214ENST00000592186 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
SMAD4-214ENST00000592186 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
SMAD4-214ENST00000592186 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms