RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 FAM236CP0DP71 79 aa5.05□□□□□ -1.6
SDF2-209ENST00000591903 MP68P56378 58 aa5.05□□□□□ -1.6
SDF2-209ENST00000591903 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
SDF2-209ENST00000591903 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
SDF2-209ENST00000591903 CYP4F30PQ9H0H9 118 aa5.04□□□□□ -1.6
SDF2-209ENST00000591903 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
SDF2-209ENST00000591903 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
SDF2-209ENST00000591903 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SDF2-209ENST00000591903 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
SDF2-209ENST00000591903 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
SDF2-209ENST00000591903 A8MUN3 132 aa4.94□□□□□ -1.62
SDF2-209ENST00000591903 C4orf26Q17RF5 130 aa4.94□□□□□ -1.62
SDF2-209ENST00000591903 KLKP1Q107X0 134 aa4.9□□□□□ -1.63
SDF2-209ENST00000591903 COX7CP15954 63 aa4.89□□□□□ -1.63
SDF2-209ENST00000591903 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
SDF2-209ENST00000591903 PCP4P48539 62 aa4.88□□□□□ -1.63
SDF2-209ENST00000591903 C20orf197Q8N268 126 aa4.86□□□□□ -1.63
SDF2-209ENST00000591903 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
SDF2-209ENST00000591903 NDUFC1O43677 76 aa4.85□□□□□ -1.63
SDF2-209ENST00000591903 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
SDF2-209ENST00000591903 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
SDF2-209ENST00000591903 S4R3F8 94 aa4.83□□□□□ -1.64
SDF2-209ENST00000591903 SNURFQ9Y675 71 aa4.82□□□□□ -1.64
SDF2-209ENST00000591903 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
SDF2-209ENST00000591903 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
SDF2-209ENST00000591903 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
SDF2-209ENST00000591903 A6NN06 94 aa4.78□□□□□ -1.64
SDF2-209ENST00000591903 ACYP2P14621 99 aa4.78□□□□□ -1.64
SDF2-209ENST00000591903 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
SDF2-209ENST00000591903 LCA10Q71F78 164 aa4.78□□□□□ -1.64
SDF2-209ENST00000591903 H7BZZ5 65 aa4.75□□□□□ -1.65
SDF2-209ENST00000591903 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
SDF2-209ENST00000591903 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
SDF2-209ENST00000591903 KMT2DO14686 5537 aa4.73□□□□□ -1.65
SDF2-209ENST00000591903 H0YAA0 97 aa4.73□□□□□ -1.65
SDF2-209ENST00000591903 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
SDF2-209ENST00000591903 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
SDF2-209ENST00000591903 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
SDF2-209ENST00000591903 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
SDF2-209ENST00000591903 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
SDF2-209ENST00000591903 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
SDF2-209ENST00000591903 TMEM258P61165 79 aa4.64□□□□□ -1.67
SDF2-209ENST00000591903 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
SDF2-209ENST00000591903 Q5VV11 94 aa4.63□□□□□ -1.67
SDF2-209ENST00000591903 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
SDF2-209ENST00000591903 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
SDF2-209ENST00000591903 COA5Q86WW8 74 aa4.62□□□□□ -1.67
SDF2-209ENST00000591903 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
SDF2-209ENST00000591903 MT1BP07438 61 aa4.61□□□□□ -1.67
SDF2-209ENST00000591903 SPRR2EP22531 72 aa4.58□□□□□ -1.68
SDF2-209ENST00000591903 SPRR2BP35325 72 aa4.58□□□□□ -1.68
SDF2-209ENST00000591903 SPRR2AP35326 72 aa4.58□□□□□ -1.68
SDF2-209ENST00000591903 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
SDF2-209ENST00000591903 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
SDF2-209ENST00000591903 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
SDF2-209ENST00000591903 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
SDF2-209ENST00000591903 P0C880 135 aa4.47□□□□□ -1.69
SDF2-209ENST00000591903 SEC61GP60059 68 aa4.47□□□□□ -1.69
SDF2-209ENST00000591903 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
SDF2-209ENST00000591903 M0QZ58 72 aa4.45□□□□□ -1.7
SDF2-209ENST00000591903 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
SDF2-209ENST00000591903 R4GN34 69 aa4.45□□□□□ -1.7
SDF2-209ENST00000591903 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
SDF2-209ENST00000591903 SPRR2DP22532 72 aa4.44□□□□□ -1.7
SDF2-209ENST00000591903 A0A1B0GU69 56 aa4.39□□□□□ -1.71
SDF2-209ENST00000591903 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
SDF2-209ENST00000591903 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
SDF2-209ENST00000591903 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
SDF2-209ENST00000591903 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
SDF2-209ENST00000591903 V9GYY9 64 aa4.36□□□□□ -1.71
SDF2-209ENST00000591903 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
SDF2-209ENST00000591903 A0A1B0GU33 70 aa4.34□□□□□ -1.71
SDF2-209ENST00000591903 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
SDF2-209ENST00000591903 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
SDF2-209ENST00000591903 Q1T7F1 81 aa4.31□□□□□ -1.72
SDF2-209ENST00000591903 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
SDF2-209ENST00000591903 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
SDF2-209ENST00000591903 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
SDF2-209ENST00000591903 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
SDF2-209ENST00000591903 UQCR11O14957 56 aa4.24□□□□□ -1.73
SDF2-209ENST00000591903 MT1XP80297 61 aa4.22□□□□□ -1.73
SDF2-209ENST00000591903 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.73
SDF2-209ENST00000591903 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
SDF2-209ENST00000591903 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
SDF2-209ENST00000591903 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
SDF2-209ENST00000591903 PSPHP1O15172 72 aa4.15□□□□□ -1.75
SDF2-209ENST00000591903 A0A0D9SG42 100 aa4.14□□□□□ -1.75
SDF2-209ENST00000591903 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
SDF2-209ENST00000591903 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
SDF2-209ENST00000591903 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
SDF2-209ENST00000591903 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
SDF2-209ENST00000591903 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
SDF2-209ENST00000591903 A8MU10 97 aa4.1□□□□□ -1.75
SDF2-209ENST00000591903 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
SDF2-209ENST00000591903 A6NED7 52 aa4.07□□□□□ -1.76
SDF2-209ENST00000591903 K7ERS5 55 aa4.04□□□□□ -1.76
SDF2-209ENST00000591903 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
SDF2-209ENST00000591903 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
SDF2-209ENST00000591903 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
SDF2-209ENST00000591903 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms