RNA–Protein interactions for RNA: ENST00000591051.1

NPC1-210, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-210ENST00000591051 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
NPC1-210ENST00000591051 CSAG1Q6PB30 78 aa5□□□□□ -1.61
NPC1-210ENST00000591051 A8MUU9 505 aa4.98□□□□□ -1.61
NPC1-210ENST00000591051 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
NPC1-210ENST00000591051 TNXBP22105 4242 aa4.96□□□□□ -1.61
NPC1-210ENST00000591051 A0A1B0GU33 70 aa4.96□□□□□ -1.62
NPC1-210ENST00000591051 H0YAA0 97 aa4.96□□□□□ -1.62
NPC1-210ENST00000591051 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
NPC1-210ENST00000591051 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
NPC1-210ENST00000591051 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
NPC1-210ENST00000591051 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
NPC1-210ENST00000591051 DMBT1Q9UGM3 2413 aaPredicted RBP4.9□□□□□ -1.63
NPC1-210ENST00000591051 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
NPC1-210ENST00000591051 K7ERS5 55 aa4.88□□□□□ -1.63
NPC1-210ENST00000591051 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
NPC1-210ENST00000591051 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
NPC1-210ENST00000591051 J3QL48 77 aa4.87□□□□□ -1.63
NPC1-210ENST00000591051 HERC1Q15751 4861 aa4.84□□□□□ -1.64
NPC1-210ENST00000591051 ROMO1P60602 79 aa4.77□□□□□ -1.65
NPC1-210ENST00000591051 H3BS24 57 aa4.75□□□□□ -1.65
NPC1-210ENST00000591051 RPL37P61927 97 aaKnown RBP4.75□□□□□ -1.65
NPC1-210ENST00000591051 LPAP08519 4548 aa4.74□□□□□ -1.65
NPC1-210ENST00000591051 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
NPC1-210ENST00000591051 KRTAP3-3Q9BYR6 98 aa4.71□□□□□ -1.66
NPC1-210ENST00000591051 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.66
NPC1-210ENST00000591051 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
NPC1-210ENST00000591051 S4R3F8 94 aa4.67□□□□□ -1.66
NPC1-210ENST00000591051 LRP2P98164 4655 aa4.67□□□□□ -1.66
NPC1-210ENST00000591051 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
NPC1-210ENST00000591051 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
NPC1-210ENST00000591051 A0A0D9SG42 100 aa4.62□□□□□ -1.67
NPC1-210ENST00000591051 TPRXLQ17RH7 258 aa4.6□□□□□ -1.67
NPC1-210ENST00000591051 XP32Q5T750 250 aa4.6□□□□□ -1.67
NPC1-210ENST00000591051 P0C880 135 aa4.58□□□□□ -1.68
NPC1-210ENST00000591051 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
NPC1-210ENST00000591051 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
NPC1-210ENST00000591051 M0QZ58 72 aa4.54□□□□□ -1.68
NPC1-210ENST00000591051 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
NPC1-210ENST00000591051 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
NPC1-210ENST00000591051 MUC2Q02817 5179 aa4.49□□□□□ -1.69
NPC1-210ENST00000591051 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
NPC1-210ENST00000591051 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
NPC1-210ENST00000591051 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
NPC1-210ENST00000591051 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
NPC1-210ENST00000591051 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
NPC1-210ENST00000591051 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
NPC1-210ENST00000591051 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
NPC1-210ENST00000591051 R4GN34 69 aa4.32□□□□□ -1.72
NPC1-210ENST00000591051 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
NPC1-210ENST00000591051 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
NPC1-210ENST00000591051 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
NPC1-210ENST00000591051 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
NPC1-210ENST00000591051 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
NPC1-210ENST00000591051 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
NPC1-210ENST00000591051 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
NPC1-210ENST00000591051 MT1HP80294 61 aa4.17□□□□□ -1.74
NPC1-210ENST00000591051 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
NPC1-210ENST00000591051 M0R2T5 61 aa4.12□□□□□ -1.75
NPC1-210ENST00000591051 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
NPC1-210ENST00000591051 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
NPC1-210ENST00000591051 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
NPC1-210ENST00000591051 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
NPC1-210ENST00000591051 TNP1P09430 55 aa4.03□□□□□ -1.76
NPC1-210ENST00000591051 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
NPC1-210ENST00000591051 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.77
NPC1-210ENST00000591051 MT2AP02795 61 aa3.96□□□□□ -1.77
NPC1-210ENST00000591051 MT1FP04733 61 aa3.95□□□□□ -1.78
NPC1-210ENST00000591051 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
NPC1-210ENST00000591051 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
NPC1-210ENST00000591051 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
NPC1-210ENST00000591051 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
NPC1-210ENST00000591051 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
NPC1-210ENST00000591051 LCE2BO14633 110 aa3.8□□□□□ -1.8
NPC1-210ENST00000591051 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
NPC1-210ENST00000591051 USH2AO75445 5202 aa3.78□□□□□ -1.8
NPC1-210ENST00000591051 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
NPC1-210ENST00000591051 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
NPC1-210ENST00000591051 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
NPC1-210ENST00000591051 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
NPC1-210ENST00000591051 MT1BP07438 61 aa3.69□□□□□ -1.82
NPC1-210ENST00000591051 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
NPC1-210ENST00000591051 INE1O15225 51 aa3.64□□□□□ -1.83
NPC1-210ENST00000591051 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
NPC1-210ENST00000591051 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
NPC1-210ENST00000591051 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.84
NPC1-210ENST00000591051 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
NPC1-210ENST00000591051 MT1XP80297 61 aa3.58□□□□□ -1.84
NPC1-210ENST00000591051 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
NPC1-210ENST00000591051 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
NPC1-210ENST00000591051 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
NPC1-210ENST00000591051 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
NPC1-210ENST00000591051 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
NPC1-210ENST00000591051 KMT2DO14686 5537 aa3.42□□□□□ -1.86
NPC1-210ENST00000591051 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
NPC1-210ENST00000591051 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
NPC1-210ENST00000591051 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
NPC1-210ENST00000591051 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
NPC1-210ENST00000591051 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
NPC1-210ENST00000591051 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
NPC1-210ENST00000591051 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms