RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 HMCN2Q8NDA2 5059 aa10.13□□□□□ -0.79
NCLN-205ENST00000590671 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
NCLN-205ENST00000590671 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
NCLN-205ENST00000590671 LCA10Q71F78 164 aa10.08□□□□□ -0.8
NCLN-205ENST00000590671 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
NCLN-205ENST00000590671 A0A1B0GU69 56 aa10.08□□□□□ -0.8
NCLN-205ENST00000590671 A8MU10 97 aa10.05□□□□□ -0.8
NCLN-205ENST00000590671 PMAIP1Q13794 54 aa10.05□□□□□ -0.8
NCLN-205ENST00000590671 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
NCLN-205ENST00000590671 MUC2Q02817 5179 aa10.04□□□□□ -0.8
NCLN-205ENST00000590671 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
NCLN-205ENST00000590671 RBM12B-AS1Q9P1G2 102 aa10.01□□□□□ -0.81
NCLN-205ENST00000590671 S4R3F8 94 aa10.01□□□□□ -0.81
NCLN-205ENST00000590671 A6NED7 52 aa10□□□□□ -0.81
NCLN-205ENST00000590671 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
NCLN-205ENST00000590671 SEC61GP60059 68 aa9.88□□□□□ -0.83
NCLN-205ENST00000590671 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
NCLN-205ENST00000590671 KTN1-AS1Q86SY8 53 aa9.8□□□□□ -0.84
NCLN-205ENST00000590671 A6NN06 94 aa9.79□□□□□ -0.84
NCLN-205ENST00000590671 UQCR11O14957 56 aa9.78□□□□□ -0.84
NCLN-205ENST00000590671 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
NCLN-205ENST00000590671 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
NCLN-205ENST00000590671 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
NCLN-205ENST00000590671 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
NCLN-205ENST00000590671 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
NCLN-205ENST00000590671 A0A1B0GU33 70 aa9.72□□□□□ -0.85
NCLN-205ENST00000590671 SPATA8Q6RVD6 105 aa9.72□□□□□ -0.85
NCLN-205ENST00000590671 P0C880 135 aa9.69□□□□□ -0.86
NCLN-205ENST00000590671 H0YAA0 97 aa9.68□□□□□ -0.86
NCLN-205ENST00000590671 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
NCLN-205ENST00000590671 RNF213Q63HN8 5207 aa9.65□□□□□ -0.87
NCLN-205ENST00000590671 FAT4Q6V0I7 4981 aa9.6□□□□□ -0.87
NCLN-205ENST00000590671 KRTAP13-4Q3LI77 160 aa9.6□□□□□ -0.87
NCLN-205ENST00000590671 FLGP20930 4061 aaPredicted RBP9.59□□□□□ -0.87
NCLN-205ENST00000590671 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
NCLN-205ENST00000590671 A0A0D9SG42 100 aa9.41□□□□□ -0.9
NCLN-205ENST00000590671 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
NCLN-205ENST00000590671 MT1HP80294 61 aa9.31□□□□□ -0.92
NCLN-205ENST00000590671 M0QZ58 72 aa9.27□□□□□ -0.93
NCLN-205ENST00000590671 R4GN34 69 aa9.24□□□□□ -0.93
NCLN-205ENST00000590671 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
NCLN-205ENST00000590671 M0R2T5 61 aa9.2□□□□□ -0.94
NCLN-205ENST00000590671 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
NCLN-205ENST00000590671 LINC01554Q52M75 96 aa9.2□□□□□ -0.94
NCLN-205ENST00000590671 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
NCLN-205ENST00000590671 SPINT4Q6UDR6 99 aa9.12□□□□□ -0.95
NCLN-205ENST00000590671 K7ERS5 55 aa9.12□□□□□ -0.95
NCLN-205ENST00000590671 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
NCLN-205ENST00000590671 MT2AP02795 61 aa9□□□□□ -0.97
NCLN-205ENST00000590671 MT1FP04733 61 aa8.98□□□□□ -0.97
NCLN-205ENST00000590671 CRIPTQ9P021 101 aa8.95□□□□□ -0.98
NCLN-205ENST00000590671 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
NCLN-205ENST00000590671 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
NCLN-205ENST00000590671 ROMO1P60602 79 aa8.88□□□□□ -0.99
NCLN-205ENST00000590671 SPRR2GQ9BYE4 73 aa8.85□□□□□ -0.99
NCLN-205ENST00000590671 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
NCLN-205ENST00000590671 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
NCLN-205ENST00000590671 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
NCLN-205ENST00000590671 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
NCLN-205ENST00000590671 KRTAP9-3Q9BYQ3 159 aa8.66□□□□□ -1.02
NCLN-205ENST00000590671 KRTAP19-8Q3LI54 63 aa8.57□□□□□ -1.04
NCLN-205ENST00000590671 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
NCLN-205ENST00000590671 MT1BP07438 61 aa8.53□□□□□ -1.04
NCLN-205ENST00000590671 LCE2BO14633 110 aa8.44□□□□□ -1.06
NCLN-205ENST00000590671 USH2AO75445 5202 aa8.34□□□□□ -1.07
NCLN-205ENST00000590671 MT1XP80297 61 aa8.3□□□□□ -1.08
NCLN-205ENST00000590671 KRTAP10-5P60370 271 aa8.3□□□□□ -1.08
NCLN-205ENST00000590671 H3BS24 57 aa8.26□□□□□ -1.09
NCLN-205ENST00000590671 TNP1P09430 55 aa8.25□□□□□ -1.09
NCLN-205ENST00000590671 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
NCLN-205ENST00000590671 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
NCLN-205ENST00000590671 KRTAP10-7P60409 375 aaPredicted RBP8.03□□□□□ -1.12
NCLN-205ENST00000590671 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
NCLN-205ENST00000590671 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
NCLN-205ENST00000590671 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
NCLN-205ENST00000590671 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
NCLN-205ENST00000590671 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
NCLN-205ENST00000590671 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
NCLN-205ENST00000590671 KMT2DO14686 5537 aa7.83□□□□□ -1.16
NCLN-205ENST00000590671 NDUFAF8A1L188 74 aa7.8□□□□□ -1.16
NCLN-205ENST00000590671 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
NCLN-205ENST00000590671 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
NCLN-205ENST00000590671 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
NCLN-205ENST00000590671 KRTAP4-8A0A0G2JLE6 195 aa7.72□□□□□ -1.17
NCLN-205ENST00000590671 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
NCLN-205ENST00000590671 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
NCLN-205ENST00000590671 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
NCLN-205ENST00000590671 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
NCLN-205ENST00000590671 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
NCLN-205ENST00000590671 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
NCLN-205ENST00000590671 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
NCLN-205ENST00000590671 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
NCLN-205ENST00000590671 MT1EP04732 61 aa7.23□□□□□ -1.25
NCLN-205ENST00000590671 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.25
NCLN-205ENST00000590671 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
NCLN-205ENST00000590671 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
NCLN-205ENST00000590671 MT1LQ93083 61 aa7.12□□□□□ -1.27
NCLN-205ENST00000590671 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
NCLN-205ENST00000590671 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
NCLN-205ENST00000590671 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms