RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 hDV103S1A0JD37 113 aa2.85□□□□□ -1.95
DNMT1-220ENST00000589351 FXYD2P54710 66 aa2.85□□□□□ -1.95
DNMT1-220ENST00000589351 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.95
DNMT1-220ENST00000589351 hADV29S1A0JD25 119 aa2.84□□□□□ -1.95
DNMT1-220ENST00000589351 K7EP34 96 aa2.84□□□□□ -1.95
DNMT1-220ENST00000589351 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
DNMT1-220ENST00000589351 SNCGO76070 127 aa2.83□□□□□ -1.96
DNMT1-220ENST00000589351 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
DNMT1-220ENST00000589351 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
DNMT1-220ENST00000589351 P0C880 135 aa2.82□□□□□ -1.96
DNMT1-220ENST00000589351 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
DNMT1-220ENST00000589351 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
DNMT1-220ENST00000589351 LINC00575Q6W349 94 aa2.82□□□□□ -1.96
DNMT1-220ENST00000589351 PPDPFLQ8WWR9 84 aa2.82□□□□□ -1.96
DNMT1-220ENST00000589351 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
DNMT1-220ENST00000589351 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.81□□□□□ -1.96
DNMT1-220ENST00000589351 Q6ZQY7 126 aa2.81□□□□□ -1.96
DNMT1-220ENST00000589351 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
DNMT1-220ENST00000589351 BVES-AS1Q5T3Y7 98 aa2.8□□□□□ -1.96
DNMT1-220ENST00000589351 C3orf79P0CE67 100 aa2.79□□□□□ -1.96
DNMT1-220ENST00000589351 KRTDAPP60985 99 aa2.79□□□□□ -1.96
DNMT1-220ENST00000589351 RBM3P98179 157 aaKnown RBP2.78□□□□□ -1.96
DNMT1-220ENST00000589351 A0A087WSZ3 146 aa2.77□□□□□ -1.97
DNMT1-220ENST00000589351 MT2AP02795 61 aa2.77□□□□□ -1.97
DNMT1-220ENST00000589351 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
DNMT1-220ENST00000589351 F8W1H4 67 aa2.76□□□□□ -1.97
DNMT1-220ENST00000589351 H3BUT2 72 aa2.76□□□□□ -1.97
DNMT1-220ENST00000589351 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
DNMT1-220ENST00000589351 DSCR10P59022 87 aa2.76□□□□□ -1.97
DNMT1-220ENST00000589351 H0YGX0 51 aa2.75□□□□□ -1.97
DNMT1-220ENST00000589351 CCKP06307 115 aa2.75□□□□□ -1.97
DNMT1-220ENST00000589351 CYSTM1Q9H1C7 97 aa2.75□□□□□ -1.97
DNMT1-220ENST00000589351 UQCR10Q9UDW1 63 aa2.75□□□□□ -1.97
DNMT1-220ENST00000589351 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
DNMT1-220ENST00000589351 MT1FP04733 61 aa2.74□□□□□ -1.97
DNMT1-220ENST00000589351 Q1T7F1 81 aa2.74□□□□□ -1.97
DNMT1-220ENST00000589351 USH2AO75445 5202 aa2.74□□□□□ -1.97
DNMT1-220ENST00000589351 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
DNMT1-220ENST00000589351 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
DNMT1-220ENST00000589351 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
DNMT1-220ENST00000589351 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
DNMT1-220ENST00000589351 CASC2Q6XLA1 102 aa2.73□□□□□ -1.97
DNMT1-220ENST00000589351 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
DNMT1-220ENST00000589351 BAALC-AS2P0C853 105 aa2.72□□□□□ -1.97
DNMT1-220ENST00000589351 HRES1P13985 223 aa2.72□□□□□ -1.97
DNMT1-220ENST00000589351 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
DNMT1-220ENST00000589351 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
DNMT1-220ENST00000589351 R4GN34 69 aa2.72□□□□□ -1.97
DNMT1-220ENST00000589351 TRBV7-4A0A0J9YYF1 115 aa2.7□□□□□ -1.98
DNMT1-220ENST00000589351 ATOX1O00244 68 aa2.7□□□□□ -1.98
DNMT1-220ENST00000589351 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
DNMT1-220ENST00000589351 A0A1W2PNM2 257 aa2.68□□□□□ -1.98
DNMT1-220ENST00000589351 DNAL4O96015 105 aa2.68□□□□□ -1.98
DNMT1-220ENST00000589351 TMEM254Q8TBM7 123 aa2.68□□□□□ -1.98
DNMT1-220ENST00000589351 SPCS1Q9Y6A9 102 aa2.68□□□□□ -1.98
DNMT1-220ENST00000589351 SPINK7P58062 85 aa2.67□□□□□ -1.98
DNMT1-220ENST00000589351 SERP2Q8N6R1 65 aa2.67□□□□□ -1.98
DNMT1-220ENST00000589351 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
DNMT1-220ENST00000589351 LINC00472Q9H8W2 130 aa2.67□□□□□ -1.98
DNMT1-220ENST00000589351 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
DNMT1-220ENST00000589351 A0A1W2PPM0 123 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 A8MU10 97 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 HCG22E2RYF7 251 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 NDUFB1O75438 58 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 ETDBQ3ZM63 59 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 ORMDL1Q9P0S3 153 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 PRO0461Q9UI25 63 aa2.66□□□□□ -1.98
DNMT1-220ENST00000589351 COX8AP10176 69 aa2.65□□□□□ -1.99
DNMT1-220ENST00000589351 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
DNMT1-220ENST00000589351 HIGD1BQ9P298 99 aa2.65□□□□□ -1.99
DNMT1-220ENST00000589351 COX6CP09669 75 aa2.64□□□□□ -1.99
DNMT1-220ENST00000589351 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
DNMT1-220ENST00000589351 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
DNMT1-220ENST00000589351 H7BZZ5 65 aa2.62□□□□□ -1.99
DNMT1-220ENST00000589351 CSAG1Q6PB30 78 aa2.62□□□□□ -1.99
DNMT1-220ENST00000589351 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
DNMT1-220ENST00000589351 H1FX-AS1Q4G0G2 97 aa2.61□□□□□ -1.99
DNMT1-220ENST00000589351 IGKV3D-7A0A0C4DH55 119 aa2.6□□□□□ -1.99
DNMT1-220ENST00000589351 Q5VV11 94 aa2.6□□□□□ -1.99
DNMT1-220ENST00000589351 SPATA45Q537H7 98 aa2.59□□□□□ -1.99
DNMT1-220ENST00000589351 TRAV22A0A0B4J277 110 aa2.58□□□□□ -2
DNMT1-220ENST00000589351 NDUFC1O43677 76 aa2.58□□□□□ -2
DNMT1-220ENST00000589351 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
DNMT1-220ENST00000589351 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
DNMT1-220ENST00000589351 JMJD7-PLA2G4BH0Y9G9 81 aa2.55□□□□□ -2
DNMT1-220ENST00000589351 PDE6GP18545 87 aa2.55□□□□□ -2
DNMT1-220ENST00000589351 KLKP1Q107X0 134 aa2.55□□□□□ -2
DNMT1-220ENST00000589351 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
DNMT1-220ENST00000589351 NREPQ16612 68 aa2.54□□□□□ -2
DNMT1-220ENST00000589351 Q8N9L7 120 aa2.53□□□□□ -2
DNMT1-220ENST00000589351 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
DNMT1-220ENST00000589351 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
DNMT1-220ENST00000589351 ATXN8Q156A1 80 aa2.51□□□□□ -2.01
DNMT1-220ENST00000589351 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
DNMT1-220ENST00000589351 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
DNMT1-220ENST00000589351 LINC00643Q86TS7 51 aa2.49□□□□□ -2.01
DNMT1-220ENST00000589351 MT1BP07438 61 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms