RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 A0A1B0GV90 55 aa8.81□□□□□ -1
TPM4-208ENST00000588410 Q5VV11 94 aa8.81□□□□□ -1
TPM4-208ENST00000588410 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
TPM4-208ENST00000588410 NDUFC1O43677 76 aa8.77□□□□□ -1.01
TPM4-208ENST00000588410 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
TPM4-208ENST00000588410 MT1BP07438 61 aa8.74□□□□□ -1.01
TPM4-208ENST00000588410 MP68P56378 58 aa8.74□□□□□ -1.01
TPM4-208ENST00000588410 KRTAP19-8Q3LI54 63 aa8.74□□□□□ -1.01
TPM4-208ENST00000588410 IMUPQ9GZP8 106 aa8.74□□□□□ -1.01
TPM4-208ENST00000588410 A8MUN3 132 aa8.72□□□□□ -1.01
TPM4-208ENST00000588410 A6NN06 94 aa8.71□□□□□ -1.02
TPM4-208ENST00000588410 J3QR89 54 aa8.71□□□□□ -1.02
TPM4-208ENST00000588410 CRIPTQ9P021 101 aa8.71□□□□□ -1.02
TPM4-208ENST00000588410 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
TPM4-208ENST00000588410 H0YAA0 97 aa8.63□□□□□ -1.03
TPM4-208ENST00000588410 KRTAP6-3Q3LI67 103 aa8.63□□□□□ -1.03
TPM4-208ENST00000588410 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
TPM4-208ENST00000588410 H3BPC8 53 aa8.58□□□□□ -1.04
TPM4-208ENST00000588410 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
TPM4-208ENST00000588410 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
TPM4-208ENST00000588410 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
TPM4-208ENST00000588410 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
TPM4-208ENST00000588410 R4GN34 69 aa8.37□□□□□ -1.07
TPM4-208ENST00000588410 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
TPM4-208ENST00000588410 K7ERU9 68 aa8.34□□□□□ -1.07
TPM4-208ENST00000588410 P0C880 135 aa8.34□□□□□ -1.07
TPM4-208ENST00000588410 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
TPM4-208ENST00000588410 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
TPM4-208ENST00000588410 NEBP20929 6669 aa8.34□□□□□ -1.08
TPM4-208ENST00000588410 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
TPM4-208ENST00000588410 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
TPM4-208ENST00000588410 M0QZ58 72 aa8.3□□□□□ -1.08
TPM4-208ENST00000588410 ACYP2P14621 99 aa8.29□□□□□ -1.08
TPM4-208ENST00000588410 MUC12Q9UKN1 5478 aa8.27□□□□□ -1.08
TPM4-208ENST00000588410 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
TPM4-208ENST00000588410 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
TPM4-208ENST00000588410 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
TPM4-208ENST00000588410 MT1XP80297 61 aa8.2□□□□□ -1.1
TPM4-208ENST00000588410 LINC01554Q52M75 96 aa8.2□□□□□ -1.1
TPM4-208ENST00000588410 KRTAP20-1Q3LI63 56 aa8.19□□□□□ -1.1
TPM4-208ENST00000588410 CHKB-CPT1BH3BT56 60 aa8.18□□□□□ -1.1
TPM4-208ENST00000588410 SNURFQ9Y675 71 aa8.14□□□□□ -1.11
TPM4-208ENST00000588410 KMT2DO14686 5537 aa8.1□□□□□ -1.11
TPM4-208ENST00000588410 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
TPM4-208ENST00000588410 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
TPM4-208ENST00000588410 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
TPM4-208ENST00000588410 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
TPM4-208ENST00000588410 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
TPM4-208ENST00000588410 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
TPM4-208ENST00000588410 SPRR2EP22531 72 aa7.9□□□□□ -1.14
TPM4-208ENST00000588410 SPRR2BP35325 72 aa7.9□□□□□ -1.14
TPM4-208ENST00000588410 SPRR2AP35326 72 aa7.9□□□□□ -1.14
TPM4-208ENST00000588410 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
TPM4-208ENST00000588410 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
TPM4-208ENST00000588410 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
TPM4-208ENST00000588410 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
TPM4-208ENST00000588410 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
TPM4-208ENST00000588410 COA5Q86WW8 74 aa7.82□□□□□ -1.16
TPM4-208ENST00000588410 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
TPM4-208ENST00000588410 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
TPM4-208ENST00000588410 COX7CP15954 63 aa7.76□□□□□ -1.17
TPM4-208ENST00000588410 SEC61GP60059 68 aa7.76□□□□□ -1.17
TPM4-208ENST00000588410 LCE1AQ5T7P2 110 aa7.76□□□□□ -1.17
TPM4-208ENST00000588410 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
TPM4-208ENST00000588410 SERP1Q9Y6X1 66 aa7.73□□□□□ -1.17
TPM4-208ENST00000588410 SPRR2DP22532 72 aa7.64□□□□□ -1.19
TPM4-208ENST00000588410 H7BZZ5 65 aa7.62□□□□□ -1.19
TPM4-208ENST00000588410 A0A0D9SG42 100 aa7.61□□□□□ -1.19
TPM4-208ENST00000588410 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
TPM4-208ENST00000588410 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
TPM4-208ENST00000588410 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
TPM4-208ENST00000588410 A0A1B0GU33 70 aa7.57□□□□□ -1.2
TPM4-208ENST00000588410 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
TPM4-208ENST00000588410 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
TPM4-208ENST00000588410 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
TPM4-208ENST00000588410 A0A1B0GU69 56 aa7.45□□□□□ -1.22
TPM4-208ENST00000588410 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
TPM4-208ENST00000588410 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
TPM4-208ENST00000588410 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
TPM4-208ENST00000588410 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
TPM4-208ENST00000588410 KRTAP19-7Q3SYF9 63 aa7.31□□□□□ -1.24
TPM4-208ENST00000588410 MT1EP04732 61 aa7.28□□□□□ -1.24
TPM4-208ENST00000588410 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
TPM4-208ENST00000588410 A8MU10 97 aa7.27□□□□□ -1.25
TPM4-208ENST00000588410 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
TPM4-208ENST00000588410 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
TPM4-208ENST00000588410 KRTAP19-3Q7Z4W3 81 aa7.22□□□□□ -1.25
TPM4-208ENST00000588410 GPR98Q8WXG9 6306 aa7.19□□□□□ -1.26
TPM4-208ENST00000588410 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
TPM4-208ENST00000588410 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
TPM4-208ENST00000588410 TNP1P09430 55 aa7.11□□□□□ -1.27
TPM4-208ENST00000588410 MT1GP13640 62 aa7.07□□□□□ -1.28
TPM4-208ENST00000588410 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
TPM4-208ENST00000588410 DSTQ03001 7570 aaKnown RBP7.06□□□□□ -1.28
TPM4-208ENST00000588410 TMEM258P61165 79 aa7.06□□□□□ -1.28
TPM4-208ENST00000588410 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
TPM4-208ENST00000588410 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
TPM4-208ENST00000588410 UQCR11O14957 56 aa6.98□□□□□ -1.29
TPM4-208ENST00000588410 MT1LQ93083 61 aa6.96□□□□□ -1.3
TPM4-208ENST00000588410 MT1MQ8N339 61 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms