RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
LINC01842-201ENST00000588275 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
LINC01842-201ENST00000588275 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
LINC01842-201ENST00000588275 TRAV22A0A0B4J277 110 aa7.16□□□□□ -1.26
LINC01842-201ENST00000588275 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
LINC01842-201ENST00000588275 SPRR2EP22531 72 aa7.15□□□□□ -1.26
LINC01842-201ENST00000588275 SPRR2BP35325 72 aa7.15□□□□□ -1.26
LINC01842-201ENST00000588275 SPRR2AP35326 72 aa7.15□□□□□ -1.26
LINC01842-201ENST00000588275 NDUFC1O43677 76 aa7.14□□□□□ -1.27
LINC01842-201ENST00000588275 A8MUN3 132 aa7.11□□□□□ -1.27
LINC01842-201ENST00000588275 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
LINC01842-201ENST00000588275 H0YAA0 97 aa7.1□□□□□ -1.27
LINC01842-201ENST00000588275 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
LINC01842-201ENST00000588275 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
LINC01842-201ENST00000588275 MT1XP80297 61 aa7.06□□□□□ -1.28
LINC01842-201ENST00000588275 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
LINC01842-201ENST00000588275 ETDBQ3ZM63 59 aa7.04□□□□□ -1.28
LINC01842-201ENST00000588275 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
LINC01842-201ENST00000588275 H0Y9P7 68 aa7.03□□□□□ -1.28
LINC01842-201ENST00000588275 ACYP1P07311 99 aa7.03□□□□□ -1.28
LINC01842-201ENST00000588275 GTF2H5Q6ZYL4 71 aa7.01□□□□□ -1.29
LINC01842-201ENST00000588275 F8W1H4 67 aa6.99□□□□□ -1.29
LINC01842-201ENST00000588275 ATOX1O00244 68 aa6.99□□□□□ -1.29
LINC01842-201ENST00000588275 UQCRQO14949 82 aa6.99□□□□□ -1.29
LINC01842-201ENST00000588275 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
LINC01842-201ENST00000588275 LCE1AQ5T7P2 110 aa6.96□□□□□ -1.3
LINC01842-201ENST00000588275 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
LINC01842-201ENST00000588275 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
LINC01842-201ENST00000588275 R4GN34 69 aa6.94□□□□□ -1.3
LINC01842-201ENST00000588275 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
LINC01842-201ENST00000588275 SPRR2DP22532 72 aa6.91□□□□□ -1.3
LINC01842-201ENST00000588275 ATP5EP2Q5VTU8 51 aa6.9□□□□□ -1.3
LINC01842-201ENST00000588275 M0QZ58 72 aa6.89□□□□□ -1.31
LINC01842-201ENST00000588275 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
LINC01842-201ENST00000588275 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
LINC01842-201ENST00000588275 P0C880 135 aa6.88□□□□□ -1.31
LINC01842-201ENST00000588275 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
LINC01842-201ENST00000588275 A0A1B0GV90 55 aa6.86□□□□□ -1.31
LINC01842-201ENST00000588275 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
LINC01842-201ENST00000588275 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
LINC01842-201ENST00000588275 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
LINC01842-201ENST00000588275 MP68P56378 58 aa6.8□□□□□ -1.32
LINC01842-201ENST00000588275 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
LINC01842-201ENST00000588275 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
LINC01842-201ENST00000588275 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
LINC01842-201ENST00000588275 OCR1Q9BZK8 76 aa6.72□□□□□ -1.33
LINC01842-201ENST00000588275 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
LINC01842-201ENST00000588275 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
LINC01842-201ENST00000588275 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
LINC01842-201ENST00000588275 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
LINC01842-201ENST00000588275 H3BPC8 53 aa6.61□□□□□ -1.35
LINC01842-201ENST00000588275 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
LINC01842-201ENST00000588275 SCGB1A1P11684 91 aa6.52□□□□□ -1.37
LINC01842-201ENST00000588275 ACYP2P14621 99 aa6.47□□□□□ -1.37
LINC01842-201ENST00000588275 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
LINC01842-201ENST00000588275 GPR98Q8WXG9 6306 aa6.44□□□□□ -1.38
LINC01842-201ENST00000588275 K7ERU9 68 aa6.44□□□□□ -1.38
LINC01842-201ENST00000588275 J3QR89 54 aa6.42□□□□□ -1.38
LINC01842-201ENST00000588275 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
LINC01842-201ENST00000588275 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.39
LINC01842-201ENST00000588275 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
LINC01842-201ENST00000588275 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
LINC01842-201ENST00000588275 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
LINC01842-201ENST00000588275 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
LINC01842-201ENST00000588275 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
LINC01842-201ENST00000588275 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
LINC01842-201ENST00000588275 MT1EP04732 61 aa6.28□□□□□ -1.4
LINC01842-201ENST00000588275 SMIM20Q8N5G0 67 aa6.2□□□□□ -1.42
LINC01842-201ENST00000588275 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
LINC01842-201ENST00000588275 CYSTM1Q9H1C7 97 aa6.19□□□□□ -1.42
LINC01842-201ENST00000588275 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
LINC01842-201ENST00000588275 A0A0D9SG42 100 aa6.14□□□□□ -1.43
LINC01842-201ENST00000588275 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
LINC01842-201ENST00000588275 MT4P47944 62 aa6.09□□□□□ -1.43
LINC01842-201ENST00000588275 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
LINC01842-201ENST00000588275 MT1GP13640 62 aa6.08□□□□□ -1.44
LINC01842-201ENST00000588275 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
LINC01842-201ENST00000588275 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
LINC01842-201ENST00000588275 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
LINC01842-201ENST00000588275 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
LINC01842-201ENST00000588275 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
LINC01842-201ENST00000588275 SEC61GP60059 68 aa6.02□□□□□ -1.45
LINC01842-201ENST00000588275 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
LINC01842-201ENST00000588275 MT1MQ8N339 61 aa6.01□□□□□ -1.45
LINC01842-201ENST00000588275 COA5Q86WW8 74 aa5.99□□□□□ -1.45
LINC01842-201ENST00000588275 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
LINC01842-201ENST00000588275 MT1LQ93083 61 aa5.95□□□□□ -1.46
LINC01842-201ENST00000588275 PCP4P48539 62 aa5.94□□□□□ -1.46
LINC01842-201ENST00000588275 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
LINC01842-201ENST00000588275 A0A1B0GU33 70 aa5.92□□□□□ -1.46
LINC01842-201ENST00000588275 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
LINC01842-201ENST00000588275 SERP2Q8N6R1 65 aa5.9□□□□□ -1.46
LINC01842-201ENST00000588275 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
LINC01842-201ENST00000588275 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
LINC01842-201ENST00000588275 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
LINC01842-201ENST00000588275 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
LINC01842-201ENST00000588275 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
LINC01842-201ENST00000588275 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
LINC01842-201ENST00000588275 COX7CP15954 63 aa5.82□□□□□ -1.48
LINC01842-201ENST00000588275 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms