RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
ERCC1-205ENST00000587888 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
ERCC1-205ENST00000587888 KMT2DO14686 5537 aa6.08□□□□□ -1.44
ERCC1-205ENST00000587888 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
ERCC1-205ENST00000587888 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
ERCC1-205ENST00000587888 F8W1H4 67 aa6.05□□□□□ -1.44
ERCC1-205ENST00000587888 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
ERCC1-205ENST00000587888 NDUFC1O43677 76 aa6.02□□□□□ -1.45
ERCC1-205ENST00000587888 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
ERCC1-205ENST00000587888 TRAV22A0A0B4J277 110 aa6.01□□□□□ -1.45
ERCC1-205ENST00000587888 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
ERCC1-205ENST00000587888 SPRR2EP22531 72 aa6□□□□□ -1.45
ERCC1-205ENST00000587888 SPRR2BP35325 72 aa6□□□□□ -1.45
ERCC1-205ENST00000587888 SPRR2AP35326 72 aa6□□□□□ -1.45
ERCC1-205ENST00000587888 H0YAA0 97 aa5.98□□□□□ -1.45
ERCC1-205ENST00000587888 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
ERCC1-205ENST00000587888 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
ERCC1-205ENST00000587888 A8MUN3 132 aa5.96□□□□□ -1.46
ERCC1-205ENST00000587888 MT1XP80297 61 aa5.94□□□□□ -1.46
ERCC1-205ENST00000587888 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
ERCC1-205ENST00000587888 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
ERCC1-205ENST00000587888 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
ERCC1-205ENST00000587888 ACYP1P07311 99 aa5.92□□□□□ -1.46
ERCC1-205ENST00000587888 H0Y9P7 68 aa5.91□□□□□ -1.46
ERCC1-205ENST00000587888 J3QR89 54 aa5.9□□□□□ -1.46
ERCC1-205ENST00000587888 K7ERU9 68 aa5.89□□□□□ -1.47
ERCC1-205ENST00000587888 UQCRQO14949 82 aa5.89□□□□□ -1.47
ERCC1-205ENST00000587888 ATOX1O00244 68 aa5.87□□□□□ -1.47
ERCC1-205ENST00000587888 HIST1H4AP62805 103 aaKnown RBP5.87□□□□□ -1.47
ERCC1-205ENST00000587888 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
ERCC1-205ENST00000587888 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
ERCC1-205ENST00000587888 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
ERCC1-205ENST00000587888 R4GN34 69 aa5.83□□□□□ -1.48
ERCC1-205ENST00000587888 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
ERCC1-205ENST00000587888 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
ERCC1-205ENST00000587888 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
ERCC1-205ENST00000587888 P0C880 135 aa5.8□□□□□ -1.48
ERCC1-205ENST00000587888 SPRR2DP22532 72 aa5.8□□□□□ -1.48
ERCC1-205ENST00000587888 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
ERCC1-205ENST00000587888 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
ERCC1-205ENST00000587888 M0QZ58 72 aa5.78□□□□□ -1.48
ERCC1-205ENST00000587888 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
ERCC1-205ENST00000587888 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
ERCC1-205ENST00000587888 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
ERCC1-205ENST00000587888 MP68P56378 58 aa5.71□□□□□ -1.5
ERCC1-205ENST00000587888 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
ERCC1-205ENST00000587888 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
ERCC1-205ENST00000587888 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
ERCC1-205ENST00000587888 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
ERCC1-205ENST00000587888 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
ERCC1-205ENST00000587888 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
ERCC1-205ENST00000587888 MT-ATP8P03928 68 aa5.61□□□□□ -1.51
ERCC1-205ENST00000587888 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
ERCC1-205ENST00000587888 H3BPC8 53 aa5.56□□□□□ -1.52
ERCC1-205ENST00000587888 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
ERCC1-205ENST00000587888 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
ERCC1-205ENST00000587888 ACYP2P14621 99 aa5.46□□□□□ -1.54
ERCC1-205ENST00000587888 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
ERCC1-205ENST00000587888 SMIM20Q8N5G0 67 aa5.4□□□□□ -1.54
ERCC1-205ENST00000587888 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
ERCC1-205ENST00000587888 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
ERCC1-205ENST00000587888 PCP4P48539 62 aa5.36□□□□□ -1.55
ERCC1-205ENST00000587888 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
ERCC1-205ENST00000587888 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
ERCC1-205ENST00000587888 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
ERCC1-205ENST00000587888 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
ERCC1-205ENST00000587888 COX7CP15954 63 aa5.31□□□□□ -1.56
ERCC1-205ENST00000587888 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
ERCC1-205ENST00000587888 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
ERCC1-205ENST00000587888 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
ERCC1-205ENST00000587888 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
ERCC1-205ENST00000587888 MT1EP04732 61 aa5.27□□□□□ -1.57
ERCC1-205ENST00000587888 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
ERCC1-205ENST00000587888 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
ERCC1-205ENST00000587888 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
ERCC1-205ENST00000587888 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
ERCC1-205ENST00000587888 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
ERCC1-205ENST00000587888 A0A0D9SG42 100 aa5.16□□□□□ -1.58
ERCC1-205ENST00000587888 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
ERCC1-205ENST00000587888 MT1GP13640 62 aa5.13□□□□□ -1.59
ERCC1-205ENST00000587888 H7BZZ5 65 aa5.11□□□□□ -1.59
ERCC1-205ENST00000587888 MT4P47944 62 aa5.11□□□□□ -1.59
ERCC1-205ENST00000587888 TMEM258P61165 79 aa5.11□□□□□ -1.59
ERCC1-205ENST00000587888 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
ERCC1-205ENST00000587888 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
ERCC1-205ENST00000587888 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
ERCC1-205ENST00000587888 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
ERCC1-205ENST00000587888 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
ERCC1-205ENST00000587888 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
ERCC1-205ENST00000587888 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
ERCC1-205ENST00000587888 SEC61GP60059 68 aa5.06□□□□□ -1.6
ERCC1-205ENST00000587888 MT1MQ8N339 61 aa5.04□□□□□ -1.6
ERCC1-205ENST00000587888 COA5Q86WW8 74 aa5.03□□□□□ -1.6
ERCC1-205ENST00000587888 MT1LQ93083 61 aa5.01□□□□□ -1.61
ERCC1-205ENST00000587888 A0A1B0GU33 70 aa5□□□□□ -1.61
ERCC1-205ENST00000587888 KRTAP12-1P59990 96 aa5□□□□□ -1.61
ERCC1-205ENST00000587888 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
ERCC1-205ENST00000587888 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
ERCC1-205ENST00000587888 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
ERCC1-205ENST00000587888 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms