RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
CLPTM1-207ENST00000587537 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
CLPTM1-207ENST00000587537 SNURFQ9Y675 71 aa5.25□□□□□ -1.57
CLPTM1-207ENST00000587537 MUC2Q02817 5179 aa5.25□□□□□ -1.57
CLPTM1-207ENST00000587537 C4orf26Q17RF5 130 aa5.23□□□□□ -1.57
CLPTM1-207ENST00000587537 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
CLPTM1-207ENST00000587537 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
CLPTM1-207ENST00000587537 H7BZZ5 65 aa5.18□□□□□ -1.58
CLPTM1-207ENST00000587537 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
CLPTM1-207ENST00000587537 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
CLPTM1-207ENST00000587537 PCP4P48539 62 aa5.17□□□□□ -1.58
CLPTM1-207ENST00000587537 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
CLPTM1-207ENST00000587537 ACYP2P14621 99 aa5.16□□□□□ -1.58
CLPTM1-207ENST00000587537 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
CLPTM1-207ENST00000587537 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
CLPTM1-207ENST00000587537 H3BS24 57 aa5.13□□□□□ -1.59
CLPTM1-207ENST00000587537 TMEM258P61165 79 aa5.13□□□□□ -1.59
CLPTM1-207ENST00000587537 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
CLPTM1-207ENST00000587537 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
CLPTM1-207ENST00000587537 S4R3F8 94 aa5.11□□□□□ -1.59
CLPTM1-207ENST00000587537 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
CLPTM1-207ENST00000587537 CYSTM1Q9H1C7 97 aa5.1□□□□□ -1.59
CLPTM1-207ENST00000587537 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
CLPTM1-207ENST00000587537 SPTSSBQ8NFR3 76 aa5.08□□□□□ -1.6
CLPTM1-207ENST00000587537 MT1HP80294 61 aa5.07□□□□□ -1.6
CLPTM1-207ENST00000587537 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
CLPTM1-207ENST00000587537 M0R2T5 61 aa5.05□□□□□ -1.6
CLPTM1-207ENST00000587537 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
CLPTM1-207ENST00000587537 LCA10Q71F78 164 aa5.04□□□□□ -1.6
CLPTM1-207ENST00000587537 COA5Q86WW8 74 aa5□□□□□ -1.61
CLPTM1-207ENST00000587537 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
CLPTM1-207ENST00000587537 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
CLPTM1-207ENST00000587537 H0YAA0 97 aa4.96□□□□□ -1.62
CLPTM1-207ENST00000587537 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
CLPTM1-207ENST00000587537 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
CLPTM1-207ENST00000587537 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
CLPTM1-207ENST00000587537 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
CLPTM1-207ENST00000587537 SEC61GP60059 68 aa4.87□□□□□ -1.63
CLPTM1-207ENST00000587537 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
CLPTM1-207ENST00000587537 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
CLPTM1-207ENST00000587537 CRIPTQ9P021 101 aa4.85□□□□□ -1.63
CLPTM1-207ENST00000587537 V9GYY9 64 aa4.83□□□□□ -1.64
CLPTM1-207ENST00000587537 MT2AP02795 61 aa4.82□□□□□ -1.64
CLPTM1-207ENST00000587537 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
CLPTM1-207ENST00000587537 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
CLPTM1-207ENST00000587537 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
CLPTM1-207ENST00000587537 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
CLPTM1-207ENST00000587537 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
CLPTM1-207ENST00000587537 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
CLPTM1-207ENST00000587537 A0A1B0GU69 56 aa4.78□□□□□ -1.64
CLPTM1-207ENST00000587537 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
CLPTM1-207ENST00000587537 MT1FP04733 61 aa4.76□□□□□ -1.65
CLPTM1-207ENST00000587537 Q1T7F1 81 aa4.75□□□□□ -1.65
CLPTM1-207ENST00000587537 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
CLPTM1-207ENST00000587537 M0QZ58 72 aa4.73□□□□□ -1.65
CLPTM1-207ENST00000587537 P0C880 135 aa4.72□□□□□ -1.65
CLPTM1-207ENST00000587537 R4GN34 69 aa4.72□□□□□ -1.65
CLPTM1-207ENST00000587537 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
CLPTM1-207ENST00000587537 A0A1B0GU33 70 aa4.69□□□□□ -1.66
CLPTM1-207ENST00000587537 Q5VV11 94 aa4.68□□□□□ -1.66
CLPTM1-207ENST00000587537 UQCR11O14957 56 aa4.63□□□□□ -1.67
CLPTM1-207ENST00000587537 A6NN06 94 aa4.6□□□□□ -1.67
CLPTM1-207ENST00000587537 PSPHP1O15172 72 aa4.59□□□□□ -1.67
CLPTM1-207ENST00000587537 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
CLPTM1-207ENST00000587537 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
CLPTM1-207ENST00000587537 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
CLPTM1-207ENST00000587537 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
CLPTM1-207ENST00000587537 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CLPTM1-207ENST00000587537 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
CLPTM1-207ENST00000587537 A6NED7 52 aa4.51□□□□□ -1.69
CLPTM1-207ENST00000587537 USH2AO75445 5202 aa4.49□□□□□ -1.69
CLPTM1-207ENST00000587537 MT1BP07438 61 aa4.48□□□□□ -1.69
CLPTM1-207ENST00000587537 A0A0D9SG42 100 aa4.46□□□□□ -1.7
CLPTM1-207ENST00000587537 K7ERS5 55 aa4.45□□□□□ -1.7
CLPTM1-207ENST00000587537 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CLPTM1-207ENST00000587537 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
CLPTM1-207ENST00000587537 A8MU10 97 aa4.41□□□□□ -1.7
CLPTM1-207ENST00000587537 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
CLPTM1-207ENST00000587537 KRTAP19-6Q3LI70 58 aa4.41□□□□□ -1.7
CLPTM1-207ENST00000587537 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
CLPTM1-207ENST00000587537 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CLPTM1-207ENST00000587537 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
CLPTM1-207ENST00000587537 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
CLPTM1-207ENST00000587537 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
CLPTM1-207ENST00000587537 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CLPTM1-207ENST00000587537 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
CLPTM1-207ENST00000587537 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
CLPTM1-207ENST00000587537 MT1XP80297 61 aa4.3□□□□□ -1.72
CLPTM1-207ENST00000587537 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
CLPTM1-207ENST00000587537 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
CLPTM1-207ENST00000587537 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
CLPTM1-207ENST00000587537 TNP1P09430 55 aa4.17□□□□□ -1.74
CLPTM1-207ENST00000587537 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
CLPTM1-207ENST00000587537 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
CLPTM1-207ENST00000587537 ROMO1P60602 79 aa4.15□□□□□ -1.75
CLPTM1-207ENST00000587537 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
CLPTM1-207ENST00000587537 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CLPTM1-207ENST00000587537 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
CLPTM1-207ENST00000587537 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
CLPTM1-207ENST00000587537 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms