RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
LSM7-204ENST00000587502 LINC00208Q96KT6 92 aa10.77□□□□□ -0.69
LSM7-204ENST00000587502 MP68P56378 58 aa10.76□□□□□ -0.69
LSM7-204ENST00000587502 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
LSM7-204ENST00000587502 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
LSM7-204ENST00000587502 LCA10Q71F78 164 aa10.73□□□□□ -0.69
LSM7-204ENST00000587502 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
LSM7-204ENST00000587502 H3BPC8 53 aa10.67□□□□□ -0.7
LSM7-204ENST00000587502 SMIM20Q8N5G0 67 aa10.66□□□□□ -0.7
LSM7-204ENST00000587502 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
LSM7-204ENST00000587502 TRAV7A0A075B6U4 112 aa10.6□□□□□ -0.71
LSM7-204ENST00000587502 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
LSM7-204ENST00000587502 A8MUN3 132 aa10.55□□□□□ -0.72
LSM7-204ENST00000587502 SPRR2GQ9BYE4 73 aa10.53□□□□□ -0.72
LSM7-204ENST00000587502 Q5VV11 94 aa10.51□□□□□ -0.73
LSM7-204ENST00000587502 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.73
LSM7-204ENST00000587502 NDUFC1O43677 76 aa10.43□□□□□ -0.74
LSM7-204ENST00000587502 MT1BP07438 61 aa10.43□□□□□ -0.74
LSM7-204ENST00000587502 CRIPTQ9P021 101 aa10.43□□□□□ -0.74
LSM7-204ENST00000587502 SERP2Q8N6R1 65 aa10.41□□□□□ -0.74
LSM7-204ENST00000587502 A6NN06 94 aa10.4□□□□□ -0.74
LSM7-204ENST00000587502 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
LSM7-204ENST00000587502 NEBP20929 6669 aa10.36□□□□□ -0.75
LSM7-204ENST00000587502 H0YAA0 97 aa10.33□□□□□ -0.76
LSM7-204ENST00000587502 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
LSM7-204ENST00000587502 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
LSM7-204ENST00000587502 KRTAP20-1Q3LI63 56 aa10.27□□□□□ -0.77
LSM7-204ENST00000587502 KRTAP10-5P60370 271 aa10.24□□□□□ -0.77
LSM7-204ENST00000587502 COX7CP15954 63 aa10.21□□□□□ -0.77
LSM7-204ENST00000587502 ACYP2P14621 99 aa10.19□□□□□ -0.78
LSM7-204ENST00000587502 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
LSM7-204ENST00000587502 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
LSM7-204ENST00000587502 MUC12Q9UKN1 5478 aa10.09□□□□□ -0.79
LSM7-204ENST00000587502 ANAPC13Q9BS18 74 aa10.08□□□□□ -0.8
LSM7-204ENST00000587502 P0C880 135 aa10□□□□□ -0.81
LSM7-204ENST00000587502 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
LSM7-204ENST00000587502 SPTSSBQ8NFR3 76 aa9.99□□□□□ -0.81
LSM7-204ENST00000587502 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
LSM7-204ENST00000587502 R4GN34 69 aa9.96□□□□□ -0.82
LSM7-204ENST00000587502 H7BZZ5 65 aa9.94□□□□□ -0.82
LSM7-204ENST00000587502 PRO2289Q9P1D8 64 aa9.94□□□□□ -0.82
LSM7-204ENST00000587502 CYSTM1Q9H1C7 97 aa9.93□□□□□ -0.82
LSM7-204ENST00000587502 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
LSM7-204ENST00000587502 KRTAP5-9P26371 169 aa9.87□□□□□ -0.83
LSM7-204ENST00000587502 CCDC179H3BU77 68 aa9.85□□□□□ -0.83
LSM7-204ENST00000587502 M0QZ58 72 aa9.84□□□□□ -0.83
LSM7-204ENST00000587502 COA5Q86WW8 74 aa9.82□□□□□ -0.84
LSM7-204ENST00000587502 MT1XP80297 61 aa9.78□□□□□ -0.84
LSM7-204ENST00000587502 KRTAP2-3P0C7H8 128 aa9.75□□□□□ -0.85
LSM7-204ENST00000587502 KRTAP2-4Q9BYR9 128 aa9.75□□□□□ -0.85
LSM7-204ENST00000587502 KMT2DO14686 5537 aa9.72□□□□□ -0.85
LSM7-204ENST00000587502 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
LSM7-204ENST00000587502 ATP5EP56381 51 aaPredicted RBP9.63□□□□□ -0.87
LSM7-204ENST00000587502 MDN1Q9NU22 5596 aa9.63□□□□□ -0.87
LSM7-204ENST00000587502 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
LSM7-204ENST00000587502 SPRR2FQ96RM1 72 aa9.56□□□□□ -0.88
LSM7-204ENST00000587502 KRTAP8-1Q8IUC2 63 aa9.54□□□□□ -0.88
LSM7-204ENST00000587502 TMEM258P61165 79 aa9.53□□□□□ -0.88
LSM7-204ENST00000587502 SEC61GP60059 68 aa9.52□□□□□ -0.89
LSM7-204ENST00000587502 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
LSM7-204ENST00000587502 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
LSM7-204ENST00000587502 SPRR2EP22531 72 aa9.43□□□□□ -0.9
LSM7-204ENST00000587502 SPRR2BP35325 72 aa9.43□□□□□ -0.9
LSM7-204ENST00000587502 SPRR2AP35326 72 aa9.43□□□□□ -0.9
LSM7-204ENST00000587502 KRTAP2-2Q9BYT5 123 aa9.39□□□□□ -0.91
LSM7-204ENST00000587502 KRTAP2-1Q9BYU5 128 aa9.39□□□□□ -0.91
LSM7-204ENST00000587502 KRTAP4-8A0A0G2JLE6 195 aa9.33□□□□□ -0.92
LSM7-204ENST00000587502 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
LSM7-204ENST00000587502 A0A1B0GU69 56 aa9.32□□□□□ -0.92
LSM7-204ENST00000587502 KRTAP10-7P60409 375 aaPredicted RBP9.32□□□□□ -0.92
LSM7-204ENST00000587502 KRTAP10-12P60413 245 aa9.32□□□□□ -0.92
LSM7-204ENST00000587502 A0A1B0GU33 70 aa9.31□□□□□ -0.92
LSM7-204ENST00000587502 LCE1AQ5T7P2 110 aa9.29□□□□□ -0.92
LSM7-204ENST00000587502 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
LSM7-204ENST00000587502 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
LSM7-204ENST00000587502 A0A0D9SG42 100 aa9.19□□□□□ -0.94
LSM7-204ENST00000587502 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
LSM7-204ENST00000587502 PCP4P48539 62 aa9.17□□□□□ -0.94
LSM7-204ENST00000587502 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
LSM7-204ENST00000587502 SPRR2DP22532 72 aa9.12□□□□□ -0.95
LSM7-204ENST00000587502 GPR98Q8WXG9 6306 aa9.05□□□□□ -0.96
LSM7-204ENST00000587502 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
LSM7-204ENST00000587502 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
LSM7-204ENST00000587502 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
LSM7-204ENST00000587502 A8MU10 97 aa8.98□□□□□ -0.97
LSM7-204ENST00000587502 V9GYY9 64 aa8.96□□□□□ -0.98
LSM7-204ENST00000587502 Q1T7F1 81 aa8.9□□□□□ -0.98
LSM7-204ENST00000587502 UQCR11O14957 56 aa8.89□□□□□ -0.99
LSM7-204ENST00000587502 LCE3BQ5TA77 95 aa8.88□□□□□ -0.99
LSM7-204ENST00000587502 RPS28P62857 69 aaKnown RBP8.87□□□□□ -0.99
LSM7-204ENST00000587502 PSPHP1O15172 72 aa8.79□□□□□ -1
LSM7-204ENST00000587502 KRTAP19-7Q3SYF9 63 aa8.74□□□□□ -1.01
LSM7-204ENST00000587502 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
LSM7-204ENST00000587502 MT1EP04732 61 aa8.69□□□□□ -1.02
LSM7-204ENST00000587502 LCE5AQ5TCM9 118 aa8.66□□□□□ -1.02
LSM7-204ENST00000587502 KRTAP19-3Q7Z4W3 81 aa8.64□□□□□ -1.03
LSM7-204ENST00000587502 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
LSM7-204ENST00000587502 DSTQ03001 7570 aaKnown RBP8.57□□□□□ -1.04
LSM7-204ENST00000587502 A6NED7 52 aa8.54□□□□□ -1.04
LSM7-204ENST00000587502 KRTAP19-5Q3LI72 72 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms