RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
PRKCSH-205ENST00000587327 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
PRKCSH-205ENST00000587327 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
PRKCSH-205ENST00000587327 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
PRKCSH-205ENST00000587327 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
PRKCSH-205ENST00000587327 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
PRKCSH-205ENST00000587327 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
PRKCSH-205ENST00000587327 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
PRKCSH-205ENST00000587327 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
PRKCSH-205ENST00000587327 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
PRKCSH-205ENST00000587327 K7ERS5 55 aa8.66□□□□□ -1.02
PRKCSH-205ENST00000587327 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.03
PRKCSH-205ENST00000587327 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
PRKCSH-205ENST00000587327 XP32Q5T750 250 aa8.62□□□□□ -1.03
PRKCSH-205ENST00000587327 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
PRKCSH-205ENST00000587327 S4R3F8 94 aa8.56□□□□□ -1.04
PRKCSH-205ENST00000587327 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
PRKCSH-205ENST00000587327 ROMO1P60602 79 aa8.48□□□□□ -1.05
PRKCSH-205ENST00000587327 A0A0D9SG42 100 aa8.47□□□□□ -1.05
PRKCSH-205ENST00000587327 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
PRKCSH-205ENST00000587327 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
PRKCSH-205ENST00000587327 P0C880 135 aa8.44□□□□□ -1.06
PRKCSH-205ENST00000587327 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
PRKCSH-205ENST00000587327 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
PRKCSH-205ENST00000587327 LPAP08519 4548 aa8.33□□□□□ -1.08
PRKCSH-205ENST00000587327 LRP2P98164 4655 aa8.33□□□□□ -1.08
PRKCSH-205ENST00000587327 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
PRKCSH-205ENST00000587327 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
PRKCSH-205ENST00000587327 M0QZ58 72 aa8.19□□□□□ -1.1
PRKCSH-205ENST00000587327 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
PRKCSH-205ENST00000587327 HERC2O95714 4834 aa8.18□□□□□ -1.1
PRKCSH-205ENST00000587327 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
PRKCSH-205ENST00000587327 H3BS24 57 aa8.15□□□□□ -1.1
PRKCSH-205ENST00000587327 BIRC6Q9NR09 4857 aa8.13□□□□□ -1.11
PRKCSH-205ENST00000587327 J3QL48 77 aa8.12□□□□□ -1.11
PRKCSH-205ENST00000587327 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
PRKCSH-205ENST00000587327 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
PRKCSH-205ENST00000587327 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
PRKCSH-205ENST00000587327 R4GN34 69 aa7.97□□□□□ -1.13
PRKCSH-205ENST00000587327 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
PRKCSH-205ENST00000587327 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
PRKCSH-205ENST00000587327 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
PRKCSH-205ENST00000587327 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
PRKCSH-205ENST00000587327 HERC1Q15751 4861 aa7.76□□□□□ -1.17
PRKCSH-205ENST00000587327 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
PRKCSH-205ENST00000587327 NDUFAF8A1L188 74 aa7.71□□□□□ -1.18
PRKCSH-205ENST00000587327 MUC2Q02817 5179 aa7.7□□□□□ -1.18
PRKCSH-205ENST00000587327 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
PRKCSH-205ENST00000587327 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
PRKCSH-205ENST00000587327 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
PRKCSH-205ENST00000587327 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
PRKCSH-205ENST00000587327 LCE2CQ5TA81 110 aa7.46□□□□□ -1.21
PRKCSH-205ENST00000587327 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
PRKCSH-205ENST00000587327 FAT4Q6V0I7 4981 aa7.37□□□□□ -1.23
PRKCSH-205ENST00000587327 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
PRKCSH-205ENST00000587327 TNP1P09430 55 aa7.3□□□□□ -1.24
PRKCSH-205ENST00000587327 MT1HP80294 61 aa7.27□□□□□ -1.25
PRKCSH-205ENST00000587327 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
PRKCSH-205ENST00000587327 M0R2T5 61 aa7.19□□□□□ -1.26
PRKCSH-205ENST00000587327 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
PRKCSH-205ENST00000587327 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
PRKCSH-205ENST00000587327 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
PRKCSH-205ENST00000587327 MT2AP02795 61 aa7.09□□□□□ -1.27
PRKCSH-205ENST00000587327 MT1FP04733 61 aa7.08□□□□□ -1.28
PRKCSH-205ENST00000587327 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
PRKCSH-205ENST00000587327 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
PRKCSH-205ENST00000587327 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
PRKCSH-205ENST00000587327 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
PRKCSH-205ENST00000587327 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
PRKCSH-205ENST00000587327 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
PRKCSH-205ENST00000587327 MT1BP07438 61 aa6.79□□□□□ -1.32
PRKCSH-205ENST00000587327 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
PRKCSH-205ENST00000587327 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
PRKCSH-205ENST00000587327 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
PRKCSH-205ENST00000587327 MT1XP80297 61 aa6.72□□□□□ -1.33
PRKCSH-205ENST00000587327 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.35
PRKCSH-205ENST00000587327 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
PRKCSH-205ENST00000587327 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
PRKCSH-205ENST00000587327 LCE2BO14633 110 aa6.55□□□□□ -1.36
PRKCSH-205ENST00000587327 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
PRKCSH-205ENST00000587327 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
PRKCSH-205ENST00000587327 USH2AO75445 5202 aa6.37□□□□□ -1.39
PRKCSH-205ENST00000587327 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
PRKCSH-205ENST00000587327 INE1O15225 51 aa6.23□□□□□ -1.41
PRKCSH-205ENST00000587327 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
PRKCSH-205ENST00000587327 KMT2DO14686 5537 aa6.15□□□□□ -1.43
PRKCSH-205ENST00000587327 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
PRKCSH-205ENST00000587327 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
PRKCSH-205ENST00000587327 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
PRKCSH-205ENST00000587327 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
PRKCSH-205ENST00000587327 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
PRKCSH-205ENST00000587327 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
PRKCSH-205ENST00000587327 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
PRKCSH-205ENST00000587327 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
PRKCSH-205ENST00000587327 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
PRKCSH-205ENST00000587327 MT1LQ93083 61 aa5.82□□□□□ -1.48
PRKCSH-205ENST00000587327 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
PRKCSH-205ENST00000587327 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
PRKCSH-205ENST00000587327 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
PRKCSH-205ENST00000587327 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms