RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
APOC1-201ENST00000586638 A8MUN3 132 aa5.18□□□□□ -1.58
APOC1-201ENST00000586638 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
APOC1-201ENST00000586638 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
APOC1-201ENST00000586638 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
APOC1-201ENST00000586638 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
APOC1-201ENST00000586638 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
APOC1-201ENST00000586638 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
APOC1-201ENST00000586638 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
APOC1-201ENST00000586638 S4R3F8 94 aa5.07□□□□□ -1.6
APOC1-201ENST00000586638 MT1HP80294 61 aa5.06□□□□□ -1.6
APOC1-201ENST00000586638 Q1T7F1 81 aa5.05□□□□□ -1.6
APOC1-201ENST00000586638 LCA10Q71F78 164 aa5.05□□□□□ -1.6
APOC1-201ENST00000586638 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
APOC1-201ENST00000586638 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
APOC1-201ENST00000586638 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
APOC1-201ENST00000586638 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
APOC1-201ENST00000586638 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
APOC1-201ENST00000586638 V9GYY9 64 aa5.02□□□□□ -1.61
APOC1-201ENST00000586638 PSPHP1O15172 72 aa5.01□□□□□ -1.61
APOC1-201ENST00000586638 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
APOC1-201ENST00000586638 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
APOC1-201ENST00000586638 M0R2T5 61 aa4.99□□□□□ -1.61
APOC1-201ENST00000586638 Q5VV11 94 aa4.97□□□□□ -1.61
APOC1-201ENST00000586638 A0A1B0GU69 56 aa4.95□□□□□ -1.62
APOC1-201ENST00000586638 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
APOC1-201ENST00000586638 SEC61GP60059 68 aa4.89□□□□□ -1.63
APOC1-201ENST00000586638 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
APOC1-201ENST00000586638 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
APOC1-201ENST00000586638 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
APOC1-201ENST00000586638 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
APOC1-201ENST00000586638 A6NED7 52 aa4.84□□□□□ -1.63
APOC1-201ENST00000586638 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
APOC1-201ENST00000586638 P0C880 135 aa4.82□□□□□ -1.64
APOC1-201ENST00000586638 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
APOC1-201ENST00000586638 USH2AO75445 5202 aa4.81□□□□□ -1.64
APOC1-201ENST00000586638 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
APOC1-201ENST00000586638 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
APOC1-201ENST00000586638 A8MU10 97 aa4.79□□□□□ -1.64
APOC1-201ENST00000586638 H0YAA0 97 aa4.79□□□□□ -1.64
APOC1-201ENST00000586638 A0A1B0GU33 70 aa4.78□□□□□ -1.64
APOC1-201ENST00000586638 UQCR11O14957 56 aa4.77□□□□□ -1.65
APOC1-201ENST00000586638 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
APOC1-201ENST00000586638 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
APOC1-201ENST00000586638 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
APOC1-201ENST00000586638 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
APOC1-201ENST00000586638 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
APOC1-201ENST00000586638 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
APOC1-201ENST00000586638 M0QZ58 72 aa4.67□□□□□ -1.66
APOC1-201ENST00000586638 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
APOC1-201ENST00000586638 A0A0D9SG42 100 aa4.65□□□□□ -1.67
APOC1-201ENST00000586638 LCE2BO14633 110 aa4.65□□□□□ -1.67
APOC1-201ENST00000586638 MT2AP02795 61 aa4.65□□□□□ -1.67
APOC1-201ENST00000586638 R4GN34 69 aa4.64□□□□□ -1.67
APOC1-201ENST00000586638 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
APOC1-201ENST00000586638 NEBP20929 6669 aa4.62□□□□□ -1.67
APOC1-201ENST00000586638 MT1FP04733 61 aa4.61□□□□□ -1.67
APOC1-201ENST00000586638 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
APOC1-201ENST00000586638 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
APOC1-201ENST00000586638 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
APOC1-201ENST00000586638 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
APOC1-201ENST00000586638 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
APOC1-201ENST00000586638 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
APOC1-201ENST00000586638 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
APOC1-201ENST00000586638 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
APOC1-201ENST00000586638 A6NN06 94 aa4.52□□□□□ -1.69
APOC1-201ENST00000586638 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
APOC1-201ENST00000586638 K7ERS5 55 aa4.5□□□□□ -1.69
APOC1-201ENST00000586638 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
APOC1-201ENST00000586638 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
APOC1-201ENST00000586638 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.69
APOC1-201ENST00000586638 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
APOC1-201ENST00000586638 MT1BP07438 61 aa4.37□□□□□ -1.71
APOC1-201ENST00000586638 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
APOC1-201ENST00000586638 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
APOC1-201ENST00000586638 ROMO1P60602 79 aa4.34□□□□□ -1.71
APOC1-201ENST00000586638 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
APOC1-201ENST00000586638 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
APOC1-201ENST00000586638 KMT2DO14686 5537 aa4.31□□□□□ -1.72
APOC1-201ENST00000586638 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
APOC1-201ENST00000586638 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
APOC1-201ENST00000586638 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
APOC1-201ENST00000586638 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
APOC1-201ENST00000586638 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
APOC1-201ENST00000586638 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
APOC1-201ENST00000586638 MT1XP80297 61 aa4.22□□□□□ -1.73
APOC1-201ENST00000586638 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
APOC1-201ENST00000586638 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
APOC1-201ENST00000586638 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
APOC1-201ENST00000586638 TNP1P09430 55 aa4.13□□□□□ -1.75
APOC1-201ENST00000586638 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
APOC1-201ENST00000586638 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
APOC1-201ENST00000586638 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
APOC1-201ENST00000586638 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
APOC1-201ENST00000586638 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
APOC1-201ENST00000586638 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
APOC1-201ENST00000586638 SPRR2EP22531 72 aa3.99□□□□□ -1.77
APOC1-201ENST00000586638 SPRR2BP35325 72 aa3.99□□□□□ -1.77
APOC1-201ENST00000586638 SPRR2AP35326 72 aa3.99□□□□□ -1.77
APOC1-201ENST00000586638 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms