RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TNXBP22105 4242 aa7.4□□□□□ -1.23
CDK5RAP3-237ENST00000585163 KMT2CQ8NEZ4 4911 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-237ENST00000585163 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
CDK5RAP3-237ENST00000585163 LRP1Q07954 4544 aaKnown RBP7.37□□□□□ -1.23
CDK5RAP3-237ENST00000585163 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
CDK5RAP3-237ENST00000585163 HSPG2P98160 4391 aa7.32□□□□□ -1.24
CDK5RAP3-237ENST00000585163 NDUFAF8A1L188 74 aa7.31□□□□□ -1.24
CDK5RAP3-237ENST00000585163 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
CDK5RAP3-237ENST00000585163 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-237ENST00000585163 XP32Q5T750 250 aa7.28□□□□□ -1.24
CDK5RAP3-237ENST00000585163 Q5VSD8 79 aa7.28□□□□□ -1.24
CDK5RAP3-237ENST00000585163 K7ERS5 55 aa7.27□□□□□ -1.25
CDK5RAP3-237ENST00000585163 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-237ENST00000585163 RYR3Q15413 4870 aa7.27□□□□□ -1.25
CDK5RAP3-237ENST00000585163 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
CDK5RAP3-237ENST00000585163 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-237ENST00000585163 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
CDK5RAP3-237ENST00000585163 S4R3F8 94 aa7.22□□□□□ -1.25
CDK5RAP3-237ENST00000585163 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
CDK5RAP3-237ENST00000585163 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
CDK5RAP3-237ENST00000585163 RYR1P21817 5038 aa7.16□□□□□ -1.26
CDK5RAP3-237ENST00000585163 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.27
CDK5RAP3-237ENST00000585163 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
CDK5RAP3-237ENST00000585163 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
CDK5RAP3-237ENST00000585163 A0A0D9SG42 100 aa7.11□□□□□ -1.27
CDK5RAP3-237ENST00000585163 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
CDK5RAP3-237ENST00000585163 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
CDK5RAP3-237ENST00000585163 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP3-237ENST00000585163 LPAP08519 4548 aa7.03□□□□□ -1.28
CDK5RAP3-237ENST00000585163 KIAA1109Q2LD37 5005 aa7.02□□□□□ -1.29
CDK5RAP3-237ENST00000585163 J3QL48 77 aa6.99□□□□□ -1.29
CDK5RAP3-237ENST00000585163 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
CDK5RAP3-237ENST00000585163 LRP2P98164 4655 aa6.98□□□□□ -1.29
CDK5RAP3-237ENST00000585163 KRTAP12-2P59991 146 aa6.96□□□□□ -1.29
CDK5RAP3-237ENST00000585163 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
CDK5RAP3-237ENST00000585163 M0QZ58 72 aa6.9□□□□□ -1.31
CDK5RAP3-237ENST00000585163 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
CDK5RAP3-237ENST00000585163 ABCA13Q86UQ4 5058 aa6.82□□□□□ -1.32
CDK5RAP3-237ENST00000585163 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
CDK5RAP3-237ENST00000585163 BIRC6Q9NR09 4857 aa6.72□□□□□ -1.33
CDK5RAP3-237ENST00000585163 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
CDK5RAP3-237ENST00000585163 R4GN34 69 aa6.7□□□□□ -1.34
CDK5RAP3-237ENST00000585163 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
CDK5RAP3-237ENST00000585163 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
CDK5RAP3-237ENST00000585163 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
CDK5RAP3-237ENST00000585163 HERC2O95714 4834 aa6.58□□□□□ -1.36
CDK5RAP3-237ENST00000585163 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
CDK5RAP3-237ENST00000585163 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.36
CDK5RAP3-237ENST00000585163 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CDK5RAP3-237ENST00000585163 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
CDK5RAP3-237ENST00000585163 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
CDK5RAP3-237ENST00000585163 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
CDK5RAP3-237ENST00000585163 HERC1Q15751 4861 aa6.29□□□□□ -1.4
CDK5RAP3-237ENST00000585163 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
CDK5RAP3-237ENST00000585163 TNP1P09430 55 aa6.14□□□□□ -1.43
CDK5RAP3-237ENST00000585163 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
CDK5RAP3-237ENST00000585163 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
CDK5RAP3-237ENST00000585163 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CDK5RAP3-237ENST00000585163 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
CDK5RAP3-237ENST00000585163 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
CDK5RAP3-237ENST00000585163 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
CDK5RAP3-237ENST00000585163 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
CDK5RAP3-237ENST00000585163 M0R2T5 61 aa5.94□□□□□ -1.46
CDK5RAP3-237ENST00000585163 MT1HP80294 61 aa5.94□□□□□ -1.46
CDK5RAP3-237ENST00000585163 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
CDK5RAP3-237ENST00000585163 INE1O15225 51 aa5.9□□□□□ -1.46
CDK5RAP3-237ENST00000585163 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
CDK5RAP3-237ENST00000585163 MT2AP02795 61 aa5.86□□□□□ -1.47
CDK5RAP3-237ENST00000585163 MT1FP04733 61 aa5.86□□□□□ -1.47
CDK5RAP3-237ENST00000585163 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
CDK5RAP3-237ENST00000585163 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
CDK5RAP3-237ENST00000585163 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
CDK5RAP3-237ENST00000585163 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
CDK5RAP3-237ENST00000585163 MT1BP07438 61 aa5.7□□□□□ -1.5
CDK5RAP3-237ENST00000585163 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
CDK5RAP3-237ENST00000585163 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CDK5RAP3-237ENST00000585163 MT1XP80297 61 aa5.67□□□□□ -1.5
CDK5RAP3-237ENST00000585163 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
CDK5RAP3-237ENST00000585163 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
CDK5RAP3-237ENST00000585163 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
CDK5RAP3-237ENST00000585163 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
CDK5RAP3-237ENST00000585163 LCE2BO14633 110 aa5.34□□□□□ -1.56
CDK5RAP3-237ENST00000585163 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
CDK5RAP3-237ENST00000585163 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
CDK5RAP3-237ENST00000585163 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
CDK5RAP3-237ENST00000585163 USH2AO75445 5202 aa5.22□□□□□ -1.57
CDK5RAP3-237ENST00000585163 KMT2DO14686 5537 aa5.16□□□□□ -1.58
CDK5RAP3-237ENST00000585163 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
CDK5RAP3-237ENST00000585163 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
CDK5RAP3-237ENST00000585163 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
CDK5RAP3-237ENST00000585163 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
CDK5RAP3-237ENST00000585163 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
CDK5RAP3-237ENST00000585163 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.61
CDK5RAP3-237ENST00000585163 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
CDK5RAP3-237ENST00000585163 MT1LQ93083 61 aa4.91□□□□□ -1.62
CDK5RAP3-237ENST00000585163 MT1EP04732 61 aa4.9□□□□□ -1.63
CDK5RAP3-237ENST00000585163 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
CDK5RAP3-237ENST00000585163 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
CDK5RAP3-237ENST00000585163 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
CDK5RAP3-237ENST00000585163 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms