RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 KLKP1Q107X0 134 aa9.68□□□□□ -0.86
PPP4R1-221ENST00000582240 USH2AO75445 5202 aa9.68□□□□□ -0.86
PPP4R1-221ENST00000582240 CSAG1Q6PB30 78 aa9.64□□□□□ -0.87
PPP4R1-221ENST00000582240 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
PPP4R1-221ENST00000582240 SERP2Q8N6R1 65 aa9.61□□□□□ -0.87
PPP4R1-221ENST00000582240 SSPOA2VEC9 5147 aa9.52□□□□□ -0.89
PPP4R1-221ENST00000582240 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
PPP4R1-221ENST00000582240 SNURFQ9Y675 71 aa9.48□□□□□ -0.89
PPP4R1-221ENST00000582240 A8MUN3 132 aa9.46□□□□□ -0.9
PPP4R1-221ENST00000582240 COX7CP15954 63 aa9.46□□□□□ -0.9
PPP4R1-221ENST00000582240 KRTAP19-1Q8IUB9 90 aa9.46□□□□□ -0.9
PPP4R1-221ENST00000582240 NDUFC1O43677 76 aa9.43□□□□□ -0.9
PPP4R1-221ENST00000582240 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
PPP4R1-221ENST00000582240 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
PPP4R1-221ENST00000582240 CYSTM1Q9H1C7 97 aa9.31□□□□□ -0.92
PPP4R1-221ENST00000582240 KRTAP19-6Q3LI70 58 aa9.29□□□□□ -0.92
PPP4R1-221ENST00000582240 SPANXA2-OT1Q8N9U9 137 aa9.29□□□□□ -0.92
PPP4R1-221ENST00000582240 FCGBPQ9Y6R7 5405 aaPredicted RBP9.27□□□□□ -0.92
PPP4R1-221ENST00000582240 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.93
PPP4R1-221ENST00000582240 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
PPP4R1-221ENST00000582240 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
PPP4R1-221ENST00000582240 H7BZZ5 65 aa9.23□□□□□ -0.93
PPP4R1-221ENST00000582240 H0YAA0 97 aa9.22□□□□□ -0.93
PPP4R1-221ENST00000582240 MT1BP07438 61 aa9.22□□□□□ -0.93
PPP4R1-221ENST00000582240 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-221ENST00000582240 KRTAP19-8Q3LI54 63 aa9.19□□□□□ -0.94
PPP4R1-221ENST00000582240 ACYP2P14621 99 aa9.18□□□□□ -0.94
PPP4R1-221ENST00000582240 Q5VV11 94 aa9.17□□□□□ -0.94
PPP4R1-221ENST00000582240 CRIPTQ9P021 101 aa9.16□□□□□ -0.94
PPP4R1-221ENST00000582240 P0C880 135 aa9.09□□□□□ -0.95
PPP4R1-221ENST00000582240 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
PPP4R1-221ENST00000582240 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
PPP4R1-221ENST00000582240 KRTAP9-7A8MTY7 169 aa9□□□□□ -0.97
PPP4R1-221ENST00000582240 COA5Q86WW8 74 aa8.99□□□□□ -0.97
PPP4R1-221ENST00000582240 A6NN06 94 aa8.98□□□□□ -0.97
PPP4R1-221ENST00000582240 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
PPP4R1-221ENST00000582240 R4GN34 69 aa8.93□□□□□ -0.98
PPP4R1-221ENST00000582240 M0QZ58 72 aa8.92□□□□□ -0.98
PPP4R1-221ENST00000582240 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
PPP4R1-221ENST00000582240 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
PPP4R1-221ENST00000582240 TMEM258P61165 79 aa8.89□□□□□ -0.99
PPP4R1-221ENST00000582240 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
PPP4R1-221ENST00000582240 LINC01554Q52M75 96 aa8.82□□□□□ -1
PPP4R1-221ENST00000582240 PCP4P48539 62 aa8.79□□□□□ -1
PPP4R1-221ENST00000582240 PLAC4Q8WY50 150 aa8.78□□□□□ -1
PPP4R1-221ENST00000582240 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-221ENST00000582240 MT1XP80297 61 aa8.69□□□□□ -1.02
PPP4R1-221ENST00000582240 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
PPP4R1-221ENST00000582240 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
PPP4R1-221ENST00000582240 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
PPP4R1-221ENST00000582240 PRO2289Q9P1D8 64 aa8.6□□□□□ -1.03
PPP4R1-221ENST00000582240 SEC61GP60059 68 aa8.52□□□□□ -1.05
PPP4R1-221ENST00000582240 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
PPP4R1-221ENST00000582240 A0A1B0GU69 56 aa8.47□□□□□ -1.05
PPP4R1-221ENST00000582240 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
PPP4R1-221ENST00000582240 A0A1B0GU33 70 aa8.4□□□□□ -1.06
PPP4R1-221ENST00000582240 A0A0D9SG42 100 aa8.39□□□□□ -1.07
PPP4R1-221ENST00000582240 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
PPP4R1-221ENST00000582240 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-221ENST00000582240 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-221ENST00000582240 PRR15LQ9BU68 103 aa8.34□□□□□ -1.07
PPP4R1-221ENST00000582240 KRTAP5-9P26371 169 aa8.33□□□□□ -1.08
PPP4R1-221ENST00000582240 KMT2DO14686 5537 aa8.32□□□□□ -1.08
PPP4R1-221ENST00000582240 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
PPP4R1-221ENST00000582240 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
PPP4R1-221ENST00000582240 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
PPP4R1-221ENST00000582240 Q1T7F1 81 aa8.28□□□□□ -1.08
PPP4R1-221ENST00000582240 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
PPP4R1-221ENST00000582240 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
PPP4R1-221ENST00000582240 NEBP20929 6669 aa8.25□□□□□ -1.09
PPP4R1-221ENST00000582240 V9GYY9 64 aa8.25□□□□□ -1.09
PPP4R1-221ENST00000582240 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
PPP4R1-221ENST00000582240 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
PPP4R1-221ENST00000582240 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
PPP4R1-221ENST00000582240 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
PPP4R1-221ENST00000582240 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
PPP4R1-221ENST00000582240 A8MU10 97 aa8.17□□□□□ -1.1
PPP4R1-221ENST00000582240 PSPHP1O15172 72 aa8.15□□□□□ -1.1
PPP4R1-221ENST00000582240 UQCR11O14957 56 aa8.11□□□□□ -1.11
PPP4R1-221ENST00000582240 MDN1Q9NU22 5596 aa8.05□□□□□ -1.12
PPP4R1-221ENST00000582240 SPRR2EP22531 72 aa8.04□□□□□ -1.12
PPP4R1-221ENST00000582240 SPRR2BP35325 72 aa8.04□□□□□ -1.12
PPP4R1-221ENST00000582240 SPRR2AP35326 72 aa8.04□□□□□ -1.12
PPP4R1-221ENST00000582240 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
PPP4R1-221ENST00000582240 LCE1AQ5T7P2 110 aa7.96□□□□□ -1.14
PPP4R1-221ENST00000582240 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
PPP4R1-221ENST00000582240 A6NED7 52 aa7.88□□□□□ -1.15
PPP4R1-221ENST00000582240 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
PPP4R1-221ENST00000582240 SPRR2DP22532 72 aa7.77□□□□□ -1.17
PPP4R1-221ENST00000582240 KRTAP2-3P0C7H8 128 aa7.76□□□□□ -1.17
PPP4R1-221ENST00000582240 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
PPP4R1-221ENST00000582240 KRTAP2-4Q9BYR9 128 aa7.76□□□□□ -1.17
PPP4R1-221ENST00000582240 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
PPP4R1-221ENST00000582240 MT1EP04732 61 aa7.68□□□□□ -1.18
PPP4R1-221ENST00000582240 TNP1P09430 55 aa7.67□□□□□ -1.18
PPP4R1-221ENST00000582240 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
PPP4R1-221ENST00000582240 K7ERS5 55 aa7.66□□□□□ -1.18
PPP4R1-221ENST00000582240 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
PPP4R1-221ENST00000582240 KRTAP19-3Q7Z4W3 81 aa7.54□□□□□ -1.2
PPP4R1-221ENST00000582240 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms