RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
NDEL1-209ENST00000580738 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
NDEL1-209ENST00000580738 A8MUN3 132 aa7.84□□□□□ -1.15
NDEL1-209ENST00000580738 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
NDEL1-209ENST00000580738 H0YAA0 97 aa7.81□□□□□ -1.16
NDEL1-209ENST00000580738 M0R143 59 aa7.78□□□□□ -1.16
NDEL1-209ENST00000580738 H3BT86 120 aa7.77□□□□□ -1.17
NDEL1-209ENST00000580738 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
NDEL1-209ENST00000580738 CYP4F30PQ9H0H9 118 aa7.76□□□□□ -1.17
NDEL1-209ENST00000580738 TSTD3H0UI37 97 aa7.75□□□□□ -1.17
NDEL1-209ENST00000580738 TP53AIP1Q9HCN2 124 aa7.74□□□□□ -1.17
NDEL1-209ENST00000580738 NDUFC1O43677 76 aa7.72□□□□□ -1.17
NDEL1-209ENST00000580738 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
NDEL1-209ENST00000580738 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
NDEL1-209ENST00000580738 K7EP34 96 aa7.67□□□□□ -1.18
NDEL1-209ENST00000580738 UBL5Q9BZL1 73 aa7.65□□□□□ -1.18
NDEL1-209ENST00000580738 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
NDEL1-209ENST00000580738 KRTAP4-9Q9BYQ8 210 aa7.6□□□□□ -1.19
NDEL1-209ENST00000580738 R4GN34 69 aa7.59□□□□□ -1.19
NDEL1-209ENST00000580738 BATFQ16520 125 aa7.57□□□□□ -1.2
NDEL1-209ENST00000580738 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
NDEL1-209ENST00000580738 A0A1W2PPM0 123 aa7.55□□□□□ -1.2
NDEL1-209ENST00000580738 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
NDEL1-209ENST00000580738 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
NDEL1-209ENST00000580738 P0C880 135 aa7.52□□□□□ -1.21
NDEL1-209ENST00000580738 M0QZ58 72 aa7.51□□□□□ -1.21
NDEL1-209ENST00000580738 TMA7Q9Y2S6 64 aaKnown RBP7.5□□□□□ -1.21
NDEL1-209ENST00000580738 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
NDEL1-209ENST00000580738 ACYP1P07311 99 aa7.48□□□□□ -1.21
NDEL1-209ENST00000580738 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
NDEL1-209ENST00000580738 SPCS1Q9Y6A9 102 aa7.46□□□□□ -1.22
NDEL1-209ENST00000580738 C20orf197Q8N268 126 aa7.39□□□□□ -1.23
NDEL1-209ENST00000580738 H0Y9P7 68 aa7.34□□□□□ -1.23
NDEL1-209ENST00000580738 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
NDEL1-209ENST00000580738 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
NDEL1-209ENST00000580738 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
NDEL1-209ENST00000580738 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
NDEL1-209ENST00000580738 ATOX1O00244 68 aa7.29□□□□□ -1.24
NDEL1-209ENST00000580738 UQCRQO14949 82 aa7.28□□□□□ -1.24
NDEL1-209ENST00000580738 HMCN1Q96RW7 5635 aa7.28□□□□□ -1.24
NDEL1-209ENST00000580738 SMIM6P0DI80 62 aa7.23□□□□□ -1.25
NDEL1-209ENST00000580738 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
NDEL1-209ENST00000580738 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
NDEL1-209ENST00000580738 MT4P47944 62 aa7.17□□□□□ -1.26
NDEL1-209ENST00000580738 LINC00208Q96KT6 92 aa7.17□□□□□ -1.26
NDEL1-209ENST00000580738 AHNAK2Q8IVF2 5795 aa7.16□□□□□ -1.26
NDEL1-209ENST00000580738 MT1EP04732 61 aa7.16□□□□□ -1.26
NDEL1-209ENST00000580738 MT-ATP8P03928 68 aa7.14□□□□□ -1.27
NDEL1-209ENST00000580738 KRTAP5-10Q6L8G5 202 aa7.11□□□□□ -1.27
NDEL1-209ENST00000580738 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
NDEL1-209ENST00000580738 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
NDEL1-209ENST00000580738 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
NDEL1-209ENST00000580738 ETDBQ3ZM63 59 aa7.06□□□□□ -1.28
NDEL1-209ENST00000580738 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
NDEL1-209ENST00000580738 MP68P56378 58 aa6.99□□□□□ -1.29
NDEL1-209ENST00000580738 ATP5EP2Q5VTU8 51 aa6.98□□□□□ -1.29
NDEL1-209ENST00000580738 COL5A1-AS1Q5SY13 56 aa6.97□□□□□ -1.29
NDEL1-209ENST00000580738 F8W1H4 67 aa6.96□□□□□ -1.3
NDEL1-209ENST00000580738 MT1GP13640 62 aa6.96□□□□□ -1.3
NDEL1-209ENST00000580738 OCR1Q9BZK8 76 aa6.93□□□□□ -1.3
NDEL1-209ENST00000580738 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
NDEL1-209ENST00000580738 KRTAP5-7Q6L8G8 165 aa6.9□□□□□ -1.3
NDEL1-209ENST00000580738 KRTAP5-4Q6L8H1 288 aa6.89□□□□□ -1.31
NDEL1-209ENST00000580738 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
NDEL1-209ENST00000580738 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
NDEL1-209ENST00000580738 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
NDEL1-209ENST00000580738 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
NDEL1-209ENST00000580738 MT1MQ8N339 61 aa6.85□□□□□ -1.31
NDEL1-209ENST00000580738 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
NDEL1-209ENST00000580738 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
NDEL1-209ENST00000580738 KRTAP5-3Q6L8H2 238 aa6.8□□□□□ -1.32
NDEL1-209ENST00000580738 H3BPC8 53 aa6.78□□□□□ -1.32
NDEL1-209ENST00000580738 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
NDEL1-209ENST00000580738 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
NDEL1-209ENST00000580738 A0A0D9SG42 100 aa6.76□□□□□ -1.33
NDEL1-209ENST00000580738 MT1LQ93083 61 aa6.74□□□□□ -1.33
NDEL1-209ENST00000580738 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
NDEL1-209ENST00000580738 LOC105371267A0A1B0GV96 52 aa6.71□□□□□ -1.34
NDEL1-209ENST00000580738 ACYP2P14621 99 aa6.71□□□□□ -1.34
NDEL1-209ENST00000580738 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
NDEL1-209ENST00000580738 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
NDEL1-209ENST00000580738 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
NDEL1-209ENST00000580738 KRTAP20-2Q3LI61 65 aa6.55□□□□□ -1.36
NDEL1-209ENST00000580738 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
NDEL1-209ENST00000580738 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
NDEL1-209ENST00000580738 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
NDEL1-209ENST00000580738 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
NDEL1-209ENST00000580738 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
NDEL1-209ENST00000580738 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
NDEL1-209ENST00000580738 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
NDEL1-209ENST00000580738 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
NDEL1-209ENST00000580738 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
NDEL1-209ENST00000580738 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
NDEL1-209ENST00000580738 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
NDEL1-209ENST00000580738 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
NDEL1-209ENST00000580738 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
NDEL1-209ENST00000580738 TNP1P09430 55 aa6.16□□□□□ -1.42
NDEL1-209ENST00000580738 A0A1B0GU33 70 aa6.15□□□□□ -1.42
NDEL1-209ENST00000580738 SEC61GP60059 68 aa6.15□□□□□ -1.42
NDEL1-209ENST00000580738 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms