RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
NDEL1-208ENST00000580237 MP68P56378 58 aa5.04□□□□□ -1.6
NDEL1-208ENST00000580237 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
NDEL1-208ENST00000580237 LINC00208Q96KT6 92 aa5.03□□□□□ -1.6
NDEL1-208ENST00000580237 SCGB1A1P11684 91 aa5□□□□□ -1.61
NDEL1-208ENST00000580237 OCR1Q9BZK8 76 aa5□□□□□ -1.61
NDEL1-208ENST00000580237 A8MUN3 132 aa4.98□□□□□ -1.61
NDEL1-208ENST00000580237 NDUFC1O43677 76 aa4.98□□□□□ -1.61
NDEL1-208ENST00000580237 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
NDEL1-208ENST00000580237 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
NDEL1-208ENST00000580237 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
NDEL1-208ENST00000580237 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
NDEL1-208ENST00000580237 H3BPC8 53 aa4.94□□□□□ -1.62
NDEL1-208ENST00000580237 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
NDEL1-208ENST00000580237 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
NDEL1-208ENST00000580237 K7ERU9 68 aa4.92□□□□□ -1.62
NDEL1-208ENST00000580237 Q5VV11 94 aa4.92□□□□□ -1.62
NDEL1-208ENST00000580237 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
NDEL1-208ENST00000580237 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
NDEL1-208ENST00000580237 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
NDEL1-208ENST00000580237 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
NDEL1-208ENST00000580237 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
NDEL1-208ENST00000580237 MT-ATP8P03928 68 aa4.87□□□□□ -1.63
NDEL1-208ENST00000580237 H0YAA0 97 aa4.86□□□□□ -1.63
NDEL1-208ENST00000580237 MT1BP07438 61 aa4.85□□□□□ -1.63
NDEL1-208ENST00000580237 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
NDEL1-208ENST00000580237 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
NDEL1-208ENST00000580237 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
NDEL1-208ENST00000580237 A6NN06 94 aa4.84□□□□□ -1.63
NDEL1-208ENST00000580237 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
NDEL1-208ENST00000580237 TRAV7A0A075B6U4 112 aa4.82□□□□□ -1.64
NDEL1-208ENST00000580237 MACF1Q9UPN3 7388 aaKnown RBP4.8□□□□□ -1.64
NDEL1-208ENST00000580237 C20orf197Q8N268 126 aa4.79□□□□□ -1.64
NDEL1-208ENST00000580237 ACYP2P14621 99 aa4.75□□□□□ -1.65
NDEL1-208ENST00000580237 R4GN34 69 aa4.75□□□□□ -1.65
NDEL1-208ENST00000580237 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
NDEL1-208ENST00000580237 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
NDEL1-208ENST00000580237 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
NDEL1-208ENST00000580237 SPTSSBQ8NFR3 76 aa4.73□□□□□ -1.65
NDEL1-208ENST00000580237 SNURFQ9Y675 71 aa4.73□□□□□ -1.65
NDEL1-208ENST00000580237 P0C880 135 aa4.72□□□□□ -1.65
NDEL1-208ENST00000580237 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
NDEL1-208ENST00000580237 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
NDEL1-208ENST00000580237 M0QZ58 72 aa4.71□□□□□ -1.66
NDEL1-208ENST00000580237 PCP4P48539 62 aa4.71□□□□□ -1.66
NDEL1-208ENST00000580237 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
NDEL1-208ENST00000580237 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
NDEL1-208ENST00000580237 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
NDEL1-208ENST00000580237 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
NDEL1-208ENST00000580237 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
NDEL1-208ENST00000580237 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
NDEL1-208ENST00000580237 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
NDEL1-208ENST00000580237 MT1XP80297 61 aa4.57□□□□□ -1.68
NDEL1-208ENST00000580237 COX7CP15954 63 aa4.54□□□□□ -1.68
NDEL1-208ENST00000580237 COA5Q86WW8 74 aa4.53□□□□□ -1.68
NDEL1-208ENST00000580237 SEC61GP60059 68 aa4.51□□□□□ -1.69
NDEL1-208ENST00000580237 H3BS24 57 aa4.5□□□□□ -1.69
NDEL1-208ENST00000580237 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
NDEL1-208ENST00000580237 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
NDEL1-208ENST00000580237 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
NDEL1-208ENST00000580237 NEBP20929 6669 aa4.45□□□□□ -1.7
NDEL1-208ENST00000580237 H7BZZ5 65 aa4.45□□□□□ -1.7
NDEL1-208ENST00000580237 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
NDEL1-208ENST00000580237 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
NDEL1-208ENST00000580237 SERP1Q9Y6X1 66 aa4.45□□□□□ -1.7
NDEL1-208ENST00000580237 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
NDEL1-208ENST00000580237 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
NDEL1-208ENST00000580237 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
NDEL1-208ENST00000580237 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
NDEL1-208ENST00000580237 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
NDEL1-208ENST00000580237 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
NDEL1-208ENST00000580237 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
NDEL1-208ENST00000580237 A0A0D9SG42 100 aa4.37□□□□□ -1.71
NDEL1-208ENST00000580237 KMT2DO14686 5537 aa4.36□□□□□ -1.71
NDEL1-208ENST00000580237 SPRR2EP22531 72 aa4.36□□□□□ -1.71
NDEL1-208ENST00000580237 SPRR2BP35325 72 aa4.36□□□□□ -1.71
NDEL1-208ENST00000580237 SPRR2AP35326 72 aa4.36□□□□□ -1.71
NDEL1-208ENST00000580237 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
NDEL1-208ENST00000580237 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
NDEL1-208ENST00000580237 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
NDEL1-208ENST00000580237 A0A1B0GU33 70 aa4.34□□□□□ -1.71
NDEL1-208ENST00000580237 A0A1B0GU69 56 aa4.33□□□□□ -1.72
NDEL1-208ENST00000580237 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
NDEL1-208ENST00000580237 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
NDEL1-208ENST00000580237 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
NDEL1-208ENST00000580237 ATP5EP56381 51 aaPredicted RBP4.3□□□□□ -1.72
NDEL1-208ENST00000580237 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
NDEL1-208ENST00000580237 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
NDEL1-208ENST00000580237 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
NDEL1-208ENST00000580237 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
NDEL1-208ENST00000580237 PRR15LQ9BU68 103 aa4.24□□□□□ -1.73
NDEL1-208ENST00000580237 V9GYY9 64 aa4.24□□□□□ -1.73
NDEL1-208ENST00000580237 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
NDEL1-208ENST00000580237 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
NDEL1-208ENST00000580237 SPRR2DP22532 72 aa4.22□□□□□ -1.73
NDEL1-208ENST00000580237 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
NDEL1-208ENST00000580237 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
NDEL1-208ENST00000580237 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
NDEL1-208ENST00000580237 TMEM258P61165 79 aa4.2□□□□□ -1.74
NDEL1-208ENST00000580237 A8MU10 97 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms