RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 FSIP2Q5CZC0 6907 aa11.12□□□□□ -0.63
ERBB2-209ENST00000578709 KRTAP9-6A0A140TA67 174 aa11.1□□□□□ -0.63
ERBB2-209ENST00000578709 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
ERBB2-209ENST00000578709 LCE2BO14633 110 aa11.02□□□□□ -0.65
ERBB2-209ENST00000578709 USH2AO75445 5202 aa11□□□□□ -0.65
ERBB2-209ENST00000578709 NDUFC1O43677 76 aa10.98□□□□□ -0.65
ERBB2-209ENST00000578709 DMAC1Q96GE9 116 aa10.98□□□□□ -0.65
ERBB2-209ENST00000578709 SERP2Q8N6R1 65 aa10.96□□□□□ -0.65
ERBB2-209ENST00000578709 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
ERBB2-209ENST00000578709 C20orf197Q8N268 126 aa10.84□□□□□ -0.67
ERBB2-209ENST00000578709 SSPOA2VEC9 5147 aa10.82□□□□□ -0.68
ERBB2-209ENST00000578709 H0YAA0 97 aa10.81□□□□□ -0.68
ERBB2-209ENST00000578709 KRTAP19-1Q8IUB9 90 aa10.78□□□□□ -0.68
ERBB2-209ENST00000578709 ACYP2P14621 99 aa10.77□□□□□ -0.69
ERBB2-209ENST00000578709 COX7CP15954 63 aa10.73□□□□□ -0.69
ERBB2-209ENST00000578709 SPANXA2-OT1Q8N9U9 137 aa10.73□□□□□ -0.69
ERBB2-209ENST00000578709 SPRR2GQ9BYE4 73 aa10.72□□□□□ -0.69
ERBB2-209ENST00000578709 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
ERBB2-209ENST00000578709 ADM2Q7Z4H4 148 aa10.66□□□□□ -0.7
ERBB2-209ENST00000578709 KRTAP19-8Q3LI54 63 aa10.59□□□□□ -0.71
ERBB2-209ENST00000578709 KRTAP19-6Q3LI70 58 aa10.58□□□□□ -0.72
ERBB2-209ENST00000578709 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
ERBB2-209ENST00000578709 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
ERBB2-209ENST00000578709 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
ERBB2-209ENST00000578709 FCGBPQ9Y6R7 5405 aaPredicted RBP10.52□□□□□ -0.72
ERBB2-209ENST00000578709 MT1BP07438 61 aa10.52□□□□□ -0.73
ERBB2-209ENST00000578709 Q5VV11 94 aa10.52□□□□□ -0.73
ERBB2-209ENST00000578709 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
ERBB2-209ENST00000578709 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
ERBB2-209ENST00000578709 H7BZZ5 65 aa10.49□□□□□ -0.73
ERBB2-209ENST00000578709 P0C880 135 aa10.49□□□□□ -0.73
ERBB2-209ENST00000578709 COA5Q86WW8 74 aa10.38□□□□□ -0.75
ERBB2-209ENST00000578709 R4GN34 69 aa10.36□□□□□ -0.75
ERBB2-209ENST00000578709 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
ERBB2-209ENST00000578709 M0QZ58 72 aa10.3□□□□□ -0.76
ERBB2-209ENST00000578709 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-209ENST00000578709 A6NN06 94 aa10.21□□□□□ -0.77
ERBB2-209ENST00000578709 KRTAP10-5P60370 271 aa10.19□□□□□ -0.78
ERBB2-209ENST00000578709 PLAC4Q8WY50 150 aa10.11□□□□□ -0.79
ERBB2-209ENST00000578709 ATP5EP56381 51 aaPredicted RBP10.1□□□□□ -0.79
ERBB2-209ENST00000578709 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
ERBB2-209ENST00000578709 MACF1Q9UPN3 7388 aaKnown RBP10.07□□□□□ -0.8
ERBB2-209ENST00000578709 KRTAP9-7A8MTY7 169 aa10.03□□□□□ -0.8
ERBB2-209ENST00000578709 SEC61GP60059 68 aa10.03□□□□□ -0.8
ERBB2-209ENST00000578709 SERP1Q9Y6X1 66 aa10□□□□□ -0.81
ERBB2-209ENST00000578709 TMEM258P61165 79 aa9.98□□□□□ -0.81
ERBB2-209ENST00000578709 MT1XP80297 61 aa9.97□□□□□ -0.81
ERBB2-209ENST00000578709 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
ERBB2-209ENST00000578709 PRO2289Q9P1D8 64 aa9.95□□□□□ -0.82
ERBB2-209ENST00000578709 SYNE2Q8WXH0 6885 aaKnown RBP9.88□□□□□ -0.83
ERBB2-209ENST00000578709 A0A1B0GU33 70 aa9.84□□□□□ -0.83
ERBB2-209ENST00000578709 A0A1B0GU69 56 aa9.83□□□□□ -0.84
ERBB2-209ENST00000578709 KRTAP6-3Q3LI67 103 aa9.78□□□□□ -0.84
ERBB2-209ENST00000578709 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
ERBB2-209ENST00000578709 LINC01558Q9Y6Z2 57 aa9.69□□□□□ -0.86
ERBB2-209ENST00000578709 A0A0D9SG42 100 aa9.67□□□□□ -0.86
ERBB2-209ENST00000578709 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
ERBB2-209ENST00000578709 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
ERBB2-209ENST00000578709 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
ERBB2-209ENST00000578709 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
ERBB2-209ENST00000578709 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
ERBB2-209ENST00000578709 KRTAP5-9P26371 169 aa9.52□□□□□ -0.89
ERBB2-209ENST00000578709 KRTAP10-7P60409 375 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-209ENST00000578709 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
ERBB2-209ENST00000578709 KMT2DO14686 5537 aa9.48□□□□□ -0.89
ERBB2-209ENST00000578709 KRTAP10-12P60413 245 aa9.48□□□□□ -0.89
ERBB2-209ENST00000578709 A8MU10 97 aa9.47□□□□□ -0.89
ERBB2-209ENST00000578709 PCP4P48539 62 aa9.47□□□□□ -0.89
ERBB2-209ENST00000578709 KRTAP8-1Q8IUC2 63 aa9.39□□□□□ -0.91
ERBB2-209ENST00000578709 KRTAP4-8A0A0G2JLE6 195 aa9.37□□□□□ -0.91
ERBB2-209ENST00000578709 KRTAP4-8Q9BYQ9 185 aa9.37□□□□□ -0.91
ERBB2-209ENST00000578709 UQCR11O14957 56 aa9.36□□□□□ -0.91
ERBB2-209ENST00000578709 V9GYY9 64 aa9.36□□□□□ -0.91
ERBB2-209ENST00000578709 MUC12Q9UKN1 5478 aa9.35□□□□□ -0.91
ERBB2-209ENST00000578709 Q1T7F1 81 aa9.33□□□□□ -0.92
ERBB2-209ENST00000578709 NEBP20929 6669 aa9.3□□□□□ -0.92
ERBB2-209ENST00000578709 SPRR2FQ96RM1 72 aa9.29□□□□□ -0.92
ERBB2-209ENST00000578709 PSPHP1O15172 72 aa9.22□□□□□ -0.93
ERBB2-209ENST00000578709 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
ERBB2-209ENST00000578709 MDN1Q9NU22 5596 aa9.18□□□□□ -0.94
ERBB2-209ENST00000578709 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
ERBB2-209ENST00000578709 C10orf95Q9H7T3 257 aa9.08□□□□□ -0.96
ERBB2-209ENST00000578709 SPRR2EP22531 72 aa9.05□□□□□ -0.96
ERBB2-209ENST00000578709 SPRR2BP35325 72 aa9.05□□□□□ -0.96
ERBB2-209ENST00000578709 SPRR2AP35326 72 aa9.05□□□□□ -0.96
ERBB2-209ENST00000578709 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
ERBB2-209ENST00000578709 TNP1P09430 55 aa8.95□□□□□ -0.98
ERBB2-209ENST00000578709 A6NED7 52 aa8.93□□□□□ -0.98
ERBB2-209ENST00000578709 K7ERS5 55 aa8.91□□□□□ -0.98
ERBB2-209ENST00000578709 KRTAP19-7Q3SYF9 63 aa8.9□□□□□ -0.98
ERBB2-209ENST00000578709 KRTAP20-1Q3LI63 56 aa8.83□□□□□ -1
ERBB2-209ENST00000578709 MT1EP04732 61 aa8.8□□□□□ -1
ERBB2-209ENST00000578709 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
ERBB2-209ENST00000578709 LCE3AQ5TA76 89 aa8.77□□□□□ -1.01
ERBB2-209ENST00000578709 SPRR2DP22532 72 aa8.75□□□□□ -1.01
ERBB2-209ENST00000578709 KRTAP2-3P0C7H8 128 aa8.73□□□□□ -1.01
ERBB2-209ENST00000578709 KRTAP2-4Q9BYR9 128 aa8.73□□□□□ -1.01
ERBB2-209ENST00000578709 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
ERBB2-209ENST00000578709 KRTAP19-3Q7Z4W3 81 aa8.64□□□□□ -1.03
ERBB2-209ENST00000578709 CDC42SE1Q9NRR8 79 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms